![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Csor.00g225790 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAATGTATGACAAATTGAGAAGTACAAGGATGGAATTGCAAATTTTCATTTCTTTTCTAAAACCCCAAAACCCTAATCTCTGCTCCTCTTTATAAGCAACAGAGAGCTCTAGTTTCTCCATCGGATTATCCAGACTCATCCTTCACTGCTTCGAAGGTACATTCTCTCTTCTTCATCGTTTACTTTTCGGTTGAAGTTCTGCTCTAGAATTCCGGATTCTTCGTTCTTCCAAAGCACATATCGAAGGCTTTCAGGTTCATTGTATGACTGCCTGCTGAGCTCAAAATTTGTGCGACATTGTTTCCTCGTCGTATGCTCTCACTGCACGTCCTTTGGAGTTTATAGACCGATTTCGTGTCTGACCTACACTGGATTTGGGAGCGACGACGAACATTTTCTGATCTGTTTTCCGCCTTTCATTGATTTTGATTGGTGTTTTTTTTTTTTTTTTTTTTTTTTCCTCTGGTTTTTTATTGTTTACTAGGGCGTGAGATGTATGGAGATTCTAGATATTGTTTCTGTTTTGAAGTTTTTCTTCCTTGTCAATGTGAGTCATATTGTTAGTGTTTCTTGAGTGTCATAACTTGCATGTTGGTTTAGATTTTAGTTCATTTTCTTGTCTCCTGAGAAATTAGCAAGAGAACGGCTAATGTCAATGTTTTGTGGAATTTTGTAATGCTTAATCGAAGATTACGAGGTGTTTTCTGGTGAATGATATGTGAACGATAGATTTTCAAGTAAATTTAGGTCTGAAGAATCTAATCTGAAATTGTGTGTTTGAGACACTCATTCAAATAAATCATGTCTATTACATAATTATTGTGTTTTGGAGACACTCACCGTTTTCAGTTATGATTTATTTGTGTGTACTGAGATTAAGAACTTATTAACTGCTGTGCCAACTCGTCATTACTCTTAAAATCATCCTGTCTTAATCATTAACAGAGCCCAATTTGAAGTTTGTGAGCAGCAAAGAACAATGTCCAATCCAAAAGTGTTCTTCGATATTTTGATTGGGAAGATGAAAGCAGGGCGGATTGTTATGGAGCTGTTTGCAGACACAACGCCAAAAACTGCAGAGAATTTCCGAGCCCTCTGTACCGGAGAGAAGGGGATGGGAAGATCAGGGAAGCTATTGCACTACAAAGGCTCAACATTCCACCGTATAATCCCCAACTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAGTCTATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAACACACTGGACCGGGAATTCTATCGATGGCGAATGCTGGACCAAACACCAACGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGGATGGGAAGCATGTTGTGTTTGGGAAAGTTGTGGATGGTTATAGTGTGGTAAAGGCGATGGAGAATGTGGGTTCAGACAGTGGGAGTACTAAGCAAACAGTTGTGATTGAGGACTGTGGGCAGGTAGCTGACAGTTGA ATGGGGAATACTCATCCTTCACTGCTTCGAAGAGCCCAATTTGAAGTTTGTGAGCAGCAAAGAACAATGTCCAATCCAAAAGTGTTCTTCGATATTTTGATTGGGAAGATGAAAGCAGGGCGGATTGTTATGGAGCTGTTTGCAGACACAACGCCAAAAACTGCAGAGAATTTCCGAGCCCTCTGTACCGGAGAGAAGGGGATGGGAAGATCAGGGAAGCTATTGCACTACAAAGGCTCAACATTCCACCGTATAATCCCCAACTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAGTCTATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAACACACTGGACCGGGAATTCTATCGATGGCGAATGCTGGACCAAACACCAACGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGGATGGGAAGCATGTTGTGTTTGGGAAAGTTGTGGATGGTTATAGTGTGGTAAAGGCGATGGAGAATGTGGGTTCAGACAGTGGGAGTACTAAGCAAACAGTTGTGATTGAGGACTGTGGGCAGGTAGCTGACAGTTGA ATGGGGAATACTCATCCTTCACTGCTTCGAAGAGCCCAATTTGAAGTTTGTGAGCAGCAAAGAACAATGTCCAATCCAAAAGTGTTCTTCGATATTTTGATTGGGAAGATGAAAGCAGGGCGGATTGTTATGGAGCTGTTTGCAGACACAACGCCAAAAACTGCAGAGAATTTCCGAGCCCTCTGTACCGGAGAGAAGGGGATGGGAAGATCAGGGAAGCTATTGCACTACAAAGGCTCAACATTCCACCGTATAATCCCCAACTTCATGTGCCAAGGAGGAGATTTCACAAAGGGTAATGGAACAGGAGGAGAGTCTATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAACACACTGGACCGGGAATTCTATCGATGGCGAATGCTGGACCAAACACCAACGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTCCATGGCTGGATGGGAAGCATGTTGTGTTTGGGAAAGTTGTGGATGGTTATAGTGTGGTAAAGGCGATGGAGAATGTGGGTTCAGACAGTGGGAGTACTAAGCAAACAGTTGTGATTGAGGACTGTGGGCAGGTAGCTGACAGTTGA MGNTHPSLLRRAQFEVCEQQRTMSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGMGRSGKLLHYKGSTFHRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTEKTPWLDGKHVVFGKVVDGYSVVKAMENVGSDSGSTKQTVVIEDCGQVADS Homology
BLAST of Csor.00g225790 vs. ExPASy Swiss-Prot
Match: Q38867 (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana OX=3702 GN=CYP19-3 PE=2 SV=2) HSP 1 Score: 313.5 bits (802), Expect = 1.6e-84 Identity = 143/171 (83.63%), Postives = 158/171 (92.40%), Query Frame = 0
BLAST of Csor.00g225790 vs. ExPASy Swiss-Prot
Match: Q39613 (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 1.8e-78 Identity = 137/172 (79.65%), Postives = 150/172 (87.21%), Query Frame = 0
BLAST of Csor.00g225790 vs. ExPASy Swiss-Prot
Match: Q8W171 (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.0e-77 Identity = 135/170 (79.41%), Postives = 149/170 (87.65%), Query Frame = 0
BLAST of Csor.00g225790 vs. ExPASy Swiss-Prot
Match: O49886 (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 4.3e-77 Identity = 135/172 (78.49%), Postives = 149/172 (86.63%), Query Frame = 0
BLAST of Csor.00g225790 vs. ExPASy Swiss-Prot
Match: Q38900 (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana OX=3702 GN=CYP19-1 PE=2 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 2.2e-76 Identity = 131/171 (76.61%), Postives = 150/171 (87.72%), Query Frame = 0
BLAST of Csor.00g225790 vs. NCBI nr
Match: KAG6590281.1 (Peptidyl-prolyl cis-trans isomerase CYP19-3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 405 bits (1041), Expect = 9.90e-143 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0
BLAST of Csor.00g225790 vs. NCBI nr
Match: KAG7033434.1 (Peptidyl-prolyl cis-trans isomerase CYP19-3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 384 bits (985), Expect = 8.67e-134 Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 0
BLAST of Csor.00g225790 vs. NCBI nr
Match: XP_022961274.1 (peptidyl-prolyl cis-trans isomerase CYP19-3 [Cucurbita moschata]) HSP 1 Score: 358 bits (919), Expect = 1.82e-124 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Csor.00g225790 vs. NCBI nr
Match: XP_022988225.1 (peptidyl-prolyl cis-trans isomerase CYP19-3-like [Cucurbita maxima] >XP_022988226.1 peptidyl-prolyl cis-trans isomerase CYP19-3-like [Cucurbita maxima]) HSP 1 Score: 358 bits (918), Expect = 2.59e-124 Identity = 172/174 (98.85%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Csor.00g225790 vs. NCBI nr
Match: XP_023532122.1 (peptidyl-prolyl cis-trans isomerase CYP19-3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 353 bits (905), Expect = 2.48e-122 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Csor.00g225790 vs. ExPASy TrEMBL
Match: A0A6J1HDK2 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111461821 PE=3 SV=1) HSP 1 Score: 358 bits (919), Expect = 8.82e-125 Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Csor.00g225790 vs. ExPASy TrEMBL
Match: A0A6J1JJ00 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111485527 PE=3 SV=1) HSP 1 Score: 358 bits (918), Expect = 1.25e-124 Identity = 172/174 (98.85%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Csor.00g225790 vs. ExPASy TrEMBL
Match: A0A6J1DSI0 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111023491 PE=3 SV=1) HSP 1 Score: 339 bits (869), Expect = 3.84e-117 Identity = 160/171 (93.57%), Postives = 167/171 (97.66%), Query Frame = 0
BLAST of Csor.00g225790 vs. ExPASy TrEMBL
Match: A0A059D3H3 (Peptidyl-prolyl cis-trans isomerase OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B02135 PE=3 SV=1) HSP 1 Score: 332 bits (851), Expect = 2.05e-114 Identity = 155/173 (89.60%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of Csor.00g225790 vs. ExPASy TrEMBL
Match: A0A2C9VAY5 (Peptidyl-prolyl cis-trans isomerase OS=Manihot esculenta OX=3983 GN=MANES_09G149200 PE=3 SV=1) HSP 1 Score: 332 bits (851), Expect = 2.05e-114 Identity = 156/173 (90.17%), Postives = 165/173 (95.38%), Query Frame = 0
BLAST of Csor.00g225790 vs. TAIR 10
Match: AT3G56070.1 (rotamase cyclophilin 2 ) HSP 1 Score: 313.5 bits (802), Expect = 1.2e-85 Identity = 143/171 (83.63%), Postives = 158/171 (92.40%), Query Frame = 0
BLAST of Csor.00g225790 vs. TAIR 10
Match: AT3G56070.2 (rotamase cyclophilin 2 ) HSP 1 Score: 313.5 bits (802), Expect = 1.2e-85 Identity = 143/171 (83.63%), Postives = 158/171 (92.40%), Query Frame = 0
BLAST of Csor.00g225790 vs. TAIR 10
Match: AT2G16600.1 (rotamase CYP 3 ) HSP 1 Score: 286.6 bits (732), Expect = 1.5e-77 Identity = 131/171 (76.61%), Postives = 150/171 (87.72%), Query Frame = 0
BLAST of Csor.00g225790 vs. TAIR 10
Match: AT2G21130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 286.6 bits (732), Expect = 1.5e-77 Identity = 132/171 (77.19%), Postives = 149/171 (87.13%), Query Frame = 0
BLAST of Csor.00g225790 vs. TAIR 10
Match: AT4G34870.1 (rotamase cyclophilin 5 ) HSP 1 Score: 277.3 bits (708), Expect = 9.3e-75 Identity = 130/172 (75.58%), Postives = 143/172 (83.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|