Csor.00g221800 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g221800
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Cyclin-dependent kinases regulatory subunit
Location	Csor_Chr02: 8339697 .. 8340650 (+)
RNA-Seq Expression	Csor.00g221800
Synteny	Csor.00g221800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGATGATACTTACGAGTATAGGTCCTGGATTCTTACTCTCAGTTTCTCGTCTTGGAGAATTGTTTGGAAGTGTTTAGTTCTTTGTATTCAATGGCTAACTATATTGATTGATACAGGCATGTGGTGCTCCCACCCGATGTGGCAAAGTTGCTTCCGAAGAATCGCCTTCTCTCGGAAGTAAGCAATTTAGTCTTATTCTTTATTTATGCCTATTAATTTTGTTGCGAAGGGAAGCATTCTCTGACTGTTTTTTTTTTTTAACTTGAATTCGATAGTTGGATTCTTAAATCAGGATTAATAAATGCGTCATCCTTGTTTAGACTGAATTCTCTCTTTCACTCTAAGAAGTTTTTGTTATGTAGTTTTCTAGTCTTTTAAACTTTTCATGGCGATCTTGATTTTCTCTCTTCATTTGGCTGATGATTGTTGAAAATTGAAACGGTGTTTATGTATATTTCGCATAATAGATATATCAAATAGGATTGATAATCCAGGGCTTAAGACTGTTGCGATAGAACCATCCCGGCCTCTCAATCGTGCATTCTCTGTGTGCAACCAGTGAGCAATGGACTTTACAATTAGCATAGGCACAGGAATATCGTTCATTATACCGTCAGTTCCTTTTGATTTTCTTGAATTTCTTAAAGAACATAAGTTAATCATTGTTCTAAACAAAAGGGTGCTTCCCAAATCTGTTCGAGTACTCATTTACTGGAAAGCATGTTGTTGTACTCCTAATCCTATAAATAATCAATCCTATGTGCAGAATGAGTGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGACCTGAGCCGCATATCATGCTATTCCGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAACCTCGCTCAACAGAACGTGCTTGCTGCTAAATGA

mRNA sequence

ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGATGATACTTACGAGTATAGGCATGTGGTGCTCCCACCCGATGTGGCAAAGTTGCTTCCGAAGAATCGCCTTCTCTCGGAAAATGAGTGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGACCTGAGCCGCATATCATGCTATTCCGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAACCTCGCTCAACAGAACGTGCTTGCTGCTAAATGA

Coding sequence (CDS)

ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGATGATACTTACGAGTATAGGCATGTGGTGCTCCCACCCGATGTGGCAAAGTTGCTTCCGAAGAATCGCCTTCTCTCGGAAAATGAGTGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGACCTGAGCCGCATATCATGCTATTCCGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAACCTCGCTCAACAGAACGTGCTTGCTGCTAAATGA

Protein sequence

MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLAAK

Homology

[Close]

BLAST of Csor.00g221800 vs. ExPASy Swiss-Prot
Match: O23249 (Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN=CKS1 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.8e-42
Identity = 78/82 (95.12%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQ 83
          EPHIMLFRRPLNYQQQQEN AQ
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQ 82

[Close]

BLAST of Csor.00g221800 vs. ExPASy Swiss-Prot
Match: A2XCH8 (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica OX=39946 GN=CKS1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-40
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLA 82
          EPHIMLFRRPLN+QQQQE  A
Sbjct: 61 EPHIMLFRRPLNFQQQQEAAA 81

[Close]

BLAST of Csor.00g221800 vs. ExPASy Swiss-Prot
Match: Q6PS57 (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CKS1 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-40
Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLA 82
          EPHIMLFRRPLN+QQQQE  A
Sbjct: 61 EPHIMLFRRPLNFQQQQEAAA 81

[Close]

BLAST of Csor.00g221800 vs. ExPASy Swiss-Prot
Match: Q9SJJ5 (Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CKS2 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.0e-38
Identity = 70/78 (89.74%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYS+KYFDDT+EYRHVVLPP+VAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQE 79
          EPHIMLFRRPLNYQQ+ +
Sbjct: 61 EPHIMLFRRPLNYQQEHQ 78

[Close]

BLAST of Csor.00g221800 vs. ExPASy Swiss-Prot
Match: P55933 (Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum OX=5791 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.5e-29
Identity = 54/66 (81.82%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 4  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPH 63
          IQYSEKY+DD +EYRHV+LPPDVAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPH
Sbjct: 6  IQYSEKYYDDKFEYRHVILPPDVAKEIPKNRLLSEGEWRGLGVQQSQGWVHYALHRPEPH 65

Query: 64 IMLFRR 70
          I+LFRR
Sbjct: 66 ILLFRR 71

[Close]

BLAST of Csor.00g221800 vs. NCBI nr
Match: XP_022957804.1 (cyclin-dependent kinases regulatory subunit 1 [Cucurbita moschata] >XP_022996399.1 cyclin-dependent kinases regulatory subunit 1 [Cucurbita maxima] >XP_023534106.1 cyclin-dependent kinases regulatory subunit 1 isoform X3 [Cucurbita pepo subsp. pepo] >KAG6606027.1 Cyclin-dependent kinases regulatory subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035974.1 Cyclin-dependent kinases regulatory subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 187 bits (475), Expect = 7.00e-60
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
          EPHIMLFRRPLNYQQQQENLAQQNVLAAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89

[Close]

BLAST of Csor.00g221800 vs. NCBI nr
Match: XP_038902899.1 (cyclin-dependent kinases regulatory subunit 1-like [Benincasa hispida])

HSP 1 Score: 183 bits (465), Expect = 2.35e-58
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD YEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
          EPHIMLFRRPLNYQQQQENLAQQNVLAAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89

[Close]

BLAST of Csor.00g221800 vs. NCBI nr
Match: XP_022944260.1 (cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata] >XP_023513375.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182 bits (462), Expect = 6.75e-58
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD +EYRHVVLPPDVAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDIHEYRHVVLPPDVAKLLPKNRLLSENEWRALGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
          EPHIMLFRRPLNYQQQQENLAQQNVLAAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89

[Close]

BLAST of Csor.00g221800 vs. NCBI nr
Match: XP_022986411.1 (cyclin-dependent kinases regulatory subunit 1-like [Cucurbita maxima])

HSP 1 Score: 181 bits (459), Expect = 1.94e-57
Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD +EYRHVVLPPDVAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDIHEYRHVVLPPDVAKLLPKNRLLSENEWRALGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
          EPHIMLFRRPLNYQQQQENLAQQN+LAAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENLAQQNMLAAK 89

[Close]

BLAST of Csor.00g221800 vs. NCBI nr
Match: XP_028756892.1 (cyclin-dependent kinases regulatory subunit 1 [Prosopis alba] >XP_028788395.1 cyclin-dependent kinases regulatory subunit 1 [Prosopis alba])

HSP 1 Score: 181 bits (459), Expect = 1.94e-57
Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
          EPHIMLFRRPLNYQQQQEN AQQN++AAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQQNMVAAK 89

[Close]

BLAST of Csor.00g221800 vs. ExPASy TrEMBL
Match: A0A6J1K8L9 (Cyclin-dependent kinases regulatory subunit OS=Cucurbita maxima OX=3661 GN=LOC111491633 PE=3 SV=1)

HSP 1 Score: 187 bits (475), Expect = 3.39e-60
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
          EPHIMLFRRPLNYQQQQENLAQQNVLAAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89

[Close]

BLAST of Csor.00g221800 vs. ExPASy TrEMBL
Match: A0A6J1H322 (Cyclin-dependent kinases regulatory subunit OS=Cucurbita moschata OX=3662 GN=LOC111459235 PE=3 SV=1)

HSP 1 Score: 187 bits (475), Expect = 3.39e-60
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
          EPHIMLFRRPLNYQQQQENLAQQNVLAAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89

[Close]

BLAST of Csor.00g221800 vs. ExPASy TrEMBL
Match: A0A6J1FYK0 (Cyclin-dependent kinases regulatory subunit OS=Cucurbita moschata OX=3662 GN=LOC111448764 PE=3 SV=1)

HSP 1 Score: 182 bits (462), Expect = 3.27e-58
Identity = 86/89 (96.63%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD +EYRHVVLPPDVAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDIHEYRHVVLPPDVAKLLPKNRLLSENEWRALGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
          EPHIMLFRRPLNYQQQQENLAQQNVLAAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89

[Close]

BLAST of Csor.00g221800 vs. ExPASy TrEMBL
Match: A0A6J1JB14 (Cyclin-dependent kinases regulatory subunit OS=Cucurbita maxima OX=3661 GN=LOC111484154 PE=3 SV=1)

HSP 1 Score: 181 bits (459), Expect = 9.38e-58
Identity = 85/89 (95.51%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDD +EYRHVVLPPDVAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSEKYFDDIHEYRHVVLPPDVAKLLPKNRLLSENEWRALGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
          EPHIMLFRRPLNYQQQQENLAQQN+LAAK
Sbjct: 61 EPHIMLFRRPLNYQQQQENLAQQNMLAAK 89

[Close]

BLAST of Csor.00g221800 vs. ExPASy TrEMBL
Match: A0A6A3D0T7 (Cyclin-dependent kinases regulatory subunit OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001644pilonHSYRG00603 PE=3 SV=1)

HSP 1 Score: 179 bits (455), Expect = 3.71e-57
Identity = 83/87 (95.40%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQQNVLA 87
          EPHIMLFRRPLNYQQQQENLAQQN++A
Sbjct: 61 EPHIMLFRRPLNYQQQQENLAQQNMVA 87

[Close]

BLAST of Csor.00g221800 vs. TAIR 10
Match: AT2G27960.1 (cyclin-dependent kinase-subunit 1 )

HSP 1 Score: 170.6 bits (431), Expect = 5.6e-43
Identity = 78/82 (95.12%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRP
Sbjct: 1  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRP 60

Query: 61 EPHIMLFRRPLNYQQQQENLAQ 83
          EPHIMLFRRPLNYQQQQEN AQ
Sbjct: 61 EPHIMLFRRPLNYQQQQENQAQ 82

[Close]

BLAST of Csor.00g221800 vs. TAIR 10
Match: AT2G27970.1 (CDK-subunit 2 )

HSP 1 Score: 158.3 bits (399), Expect = 2.9e-39
Identity = 70/78 (89.74%), Postives = 77/78 (98.72%), Query Frame = 0


Query: 1  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRP 60
          MGQIQYS+KYFDDT+EYRHVVLPP+VAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRP
Sbjct: 1  MGQIQYSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRP 60

Query: 61 EPHIMLFRRPLNYQQQQE 79
          EPHIMLFRRPLNYQQ+ +
Sbjct: 61 EPHIMLFRRPLNYQQEHQ 78

The following BLAST results are available for this feature:

BLAST of Csor.00g221800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23249	7.8e-42	95.12	Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
A2XCH8	1.1e-40	95.06	Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica OX=3...	[more]
Q6PS57	1.1e-40	95.06	Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SJJ5	4.0e-38	89.74	Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P55933	4.5e-29	81.82	Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum OX...	[more]

BLAST of Csor.00g221800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957804.1	7.00e-60	100.00	cyclin-dependent kinases regulatory subunit 1 [Cucurbita moschata] >XP_022996399...	[more]
XP_038902899.1	2.35e-58	97.75	cyclin-dependent kinases regulatory subunit 1-like [Benincasa hispida]	[more]
XP_022944260.1	6.75e-58	96.63	cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata] >XP_0235...	[more]
XP_022986411.1	1.94e-57	95.51	cyclin-dependent kinases regulatory subunit 1-like [Cucurbita maxima]	[more]
XP_028756892.1	1.94e-57	95.51	cyclin-dependent kinases regulatory subunit 1 [Prosopis alba] >XP_028788395.1 cy...	[more]

BLAST of Csor.00g221800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8L9	3.39e-60	100.00	Cyclin-dependent kinases regulatory subunit OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H322	3.39e-60	100.00	Cyclin-dependent kinases regulatory subunit OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1FYK0	3.27e-58	96.63	Cyclin-dependent kinases regulatory subunit OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JB14	9.38e-58	95.51	Cyclin-dependent kinases regulatory subunit OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6A3D0T7	3.71e-57	95.40	Cyclin-dependent kinases regulatory subunit OS=Hibiscus syriacus OX=106335 GN=F3...	[more]

BLAST of Csor.00g221800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27960.1	5.6e-43	95.12	cyclin-dependent kinase-subunit 1	[more]
AT2G27970.1	2.9e-39	89.74	CDK-subunit 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000789	Cyclin-dependent kinase, regulatory subunit	PRINTS	PR00296	CYCLINKINASE	coord: 18..32 score: 62.05 coord: 3..17 score: 65.13 coord: 40..54 score: 75.9 coord: 55..69 score: 76.41
IPR000789	Cyclin-dependent kinase, regulatory subunit	SMART	SM01084	CKS_2	coord: 3..72 e-value: 8.5E-48 score: 174.8
IPR000789	Cyclin-dependent kinase, regulatory subunit	PFAM	PF01111	CKS	coord: 4..70 e-value: 9.2E-36 score: 121.9
IPR000789	Cyclin-dependent kinase, regulatory subunit	PROSITE	PS00944	CKS_1	coord: 6..24
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	GENE3D	3.30.170.10		coord: 1..83 e-value: 5.2E-40 score: 137.7
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	SUPERFAMILY	55637	Cell cycle regulatory proteins	coord: 1..83
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 1..86
None	No IPR available	PANTHER	PTHR23415:SF29	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT	coord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g221800.m01	Csor.00g221800.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0045737	positive regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0007346	regulation of mitotic cell cycle
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0061575	cyclin-dependent protein serine/threonine kinase activator activity
molecular_function	GO:0042393	histone binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity