Csor.00g219640 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g219640
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ferredoxin-thioredoxin reductase, variable chain
Location	Csor_Chr04: 6600478 .. 6601011 (-)
RNA-Seq Expression	Csor.00g219640
Synteny	Csor.00g219640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCACTATGGCGAACAGTATCGGCGTGATACCAACGCCGGCGCCCACGGCCGCTCGTCCTGCCTGTTCTATGACGGTATTCTCTAGTACTGATTTCAAATCGTCCTATTCCCCGTCCGTGAGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCAACTGCTCGGTTACAAGAGGGAGAAGATTCTTCAGCGAAGTTACTGTCAAATCAGATTCCGGTACTTTGTCTTCAGCTGCTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGATGAGACGGATGAAGCGGCTGCCGCTAGAATTGGAGCCAGAGTTAGGGTTAAGGTGCCTTTGAAGTTGTATCATGTTGCTAAGTTACCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGATTATGTACGTGTTTGGAAGGGGAAGCGTGTATCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCAGTCGAAGGCCGTCCACCGGTCAAATTCCTAGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

mRNA sequence

ATGATCACTATGGCGAACAGTATCGGCGTGATACCAACGCCGGCGCCCACGGCCGCTCGTCCTGCCTGTTCTATGACGGTATTCTCTAGTACTGATTTCAAATCGTCCTATTCCCCGTCCGTGAGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCAACTGCTCGGTTACAAGAGGGAGAAGATTCTTCAGCGAAGTTACTGTCAAATCAGATTCCGGTACTTTGTCTTCAGCTGCTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGATGAGACGGATGAAGCGGCTGCCGCTAGAATTGGAGCCAGAGTTAGGGTTAAGGTGCCTTTGAAGTTGTATCATGTTGCTAAGTTACCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGATTATGTACGTGTTTGGAAGGGGAAGCGTGTATCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCAGTCGAAGGCCGTCCACCGGTCAAATTCCTAGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

Coding sequence (CDS)

ATGATCACTATGGCGAACAGTATCGGCGTGATACCAACGCCGGCGCCCACGGCCGCTCGTCCTGCCTGTTCTATGACGGTATTCTCTAGTACTGATTTCAAATCGTCCTATTCCCCGTCCGTGAGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCAACTGCTCGGTTACAAGAGGGAGAAGATTCTTCAGCGAAGTTACTGTCAAATCAGATTCCGGTACTTTGTCTTCAGCTGCTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGATGAGACGGATGAAGCGGCTGCCGCTAGAATTGGAGCCAGAGTTAGGGTTAAGGTGCCTTTGAAGTTGTATCATGTTGCTAAGTTACCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGATTATGTACGTGTTTGGAAGGGGAAGCGTGTATCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCAGTCGAAGGCCGTCCACCGGTCAAATTCCTAGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

Protein sequence

MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

Homology

[Close]

BLAST of Csor.00g219640 vs. ExPASy Swiss-Prot
Match: P80680 (Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.0e-25
Identity = 54/85 (63.53%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 94  DEAAAARIGARVRVKVPLKLYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEF 153
           + AAA +IG RVRV  PL++YHV K P+ D++GMEGV+K YV VWKGKRV+AN P+KVEF
Sbjct: 11  EAAAAPKIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRVTANFPFKVEF 70

Query: 154 VVPVEGRP-PVKFLAHLKEEEFEYV 178
            + VEG+P PV+F AHL+E+EFE+V
Sbjct: 71  ELAVEGQPKPVRFFAHLREDEFEFV 95

[Close]

BLAST of Csor.00g219640 vs. ExPASy Swiss-Prot
Match: P38365 (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=FTRV PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-17
Identity = 64/176 (36.36%), Postives = 93/176 (52.84%), Query Frame = 0


Query: 4   MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR-RF 63
           M   + V+ +    +   A +        F S  + S +  S++       + TR R   
Sbjct: 1   MTTGVAVMSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRARLAI 60

Query: 64  FSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLPEA 123
             EV +KSDS T       S++++   EDE  +    ++G +V+VK PLK+YHV KLPE 
Sbjct: 61  CCEVALKSDSST----GFDSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEV 120

Query: 124 DL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 178
           +L   M GV+K YV  WKGK +S N P+KVE+ + V  R  VK + HLKEEEFE +
Sbjct: 121 ELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 172

[Close]

BLAST of Csor.00g219640 vs. NCBI nr
Match: KAG6601079.1 (hypothetical protein SDJN03_06312, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332 bits (850), Expect = 3.11e-114
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLP 120
           RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177

[Close]

BLAST of Csor.00g219640 vs. NCBI nr
Match: KAG7031885.1 (hypothetical protein SDJN02_05926, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330 bits (847), Expect = 8.91e-114
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLP 120
           RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLK+YHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177

[Close]

BLAST of Csor.00g219640 vs. NCBI nr
Match: XP_022957590.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 329 bits (843), Expect = 3.63e-113
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+TRGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSITRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLP 120
           RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLK+YHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 177

[Close]

BLAST of Csor.00g219640 vs. NCBI nr
Match: XP_023549490.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (837), Expect = 2.98e-112
Identity = 173/177 (97.74%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+ RGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSIRRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLP 120
           RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLK+YHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 177

[Close]

BLAST of Csor.00g219640 vs. NCBI nr
Match: XP_022999561.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 322 bits (824), Expect = 2.86e-110
Identity = 171/177 (96.61%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYS SVSSLSSVVVNPFNCS+TRGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSSSVSSLSSVVVNPFNCSITRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLP 120
           RFFSEVTVKSDSGTLSSAAAVSAA TSLSEDETDEAAAARIGARVRVKVPL +YHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAAAVSAAMTSLSEDETDEAAAARIGARVRVKVPLNVYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 177

[Close]

BLAST of Csor.00g219640 vs. ExPASy TrEMBL
Match: A0A6J1H0Z6 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458936 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 1.76e-113
Identity = 174/177 (98.31%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+TRGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSITRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLP 120
           RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLK+YHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 177

[Close]

BLAST of Csor.00g219640 vs. ExPASy TrEMBL
Match: A0A6J1KDF2 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493885 PE=4 SV=1)

HSP 1 Score: 322 bits (824), Expect = 1.38e-110
Identity = 171/177 (96.61%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYS SVSSLSSVVVNPFNCS+TRGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSSSVSSLSSVVVNPFNCSITRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAKLP 120
           RFFSEVTVKSDSGTLSSAAAVSAA TSLSEDETDEAAAARIGARVRVKVPL +YHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAAAVSAAMTSLSEDETDEAAAARIGARVRVKVPLNVYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 177

[Close]

BLAST of Csor.00g219640 vs. ExPASy TrEMBL
Match: A0A0A0KV36 (FeThRed_A domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 PE=4 SV=1)

HSP 1 Score: 281 bits (720), Expect = 1.13e-94
Identity = 152/181 (83.98%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSV 60
           MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+S SV SLSS+VVNPFNCS+
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60

Query: 61  TRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHV 120
            RGRR FSEV V+SDSGT SSA AVSAATTSLSE+ETDEAAAARIGARVRVKVPLK+YHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEY 177
           AKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEY
Sbjct: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

[Close]

BLAST of Csor.00g219640 vs. ExPASy TrEMBL
Match: A0A1S3BEI2 (ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC103488798 PE=4 SV=1)

HSP 1 Score: 279 bits (713), Expect = 1.31e-93
Identity = 150/181 (82.87%), Postives = 166/181 (91.71%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSV 60
           MI +ANSIG++P P P+    AAR ACSMTVFS++D +SS+S SV SLSSVVVNPFNCS+
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 60

Query: 61  TRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHV 120
            RGRR FSEV+V+SDSGT SSA AVSAATTSLSE+ETDEAAAARIGARVRVKVPLK+YHV
Sbjct: 61  RRGRRLFSEVSVRSDSGTSSSATAVSAATTSLSEEETDEAAAARIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEY 177
           AKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEY
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 180

[Close]

BLAST of Csor.00g219640 vs. ExPASy TrEMBL
Match: A0A6J1CCI1 (ferredoxin-thioredoxin reductase, variable chain OS=Momordica charantia OX=3673 GN=LOC111009968 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 6.76e-91
Identity = 148/179 (82.68%), Postives = 158/179 (88.27%), Query Frame = 0


Query: 1   MITMANSIGVIP--TPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTR 60
           MI +A+SIGVI    PAP AARPACSM VFSS D KSSYS S  SLSSVVVNPFNCS+ R
Sbjct: 1   MINIASSIGVISPSAPAPAAARPACSMPVFSSADTKSSYSLSTVSLSSVVVNPFNCSIRR 60

Query: 61  GRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKLYHVAK 120
           GRR  SEVTV+SDSGT SSA AVSAATTSLS +ETDEAAAARIGARVRV VPLK+YHVAK
Sbjct: 61  GRRICSEVTVRSDSGTSSSATAVSAATTSLSAEETDEAAAARIGARVRVTVPLKVYHVAK 120

Query: 121 LPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 177
           LPE D+ GMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHL+EEEFEY+
Sbjct: 121 LPEVDINGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLREEEFEYI 179

[Close]

BLAST of Csor.00g219640 vs. TAIR 10
Match: AT5G23440.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 )

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-29
Identity = 79/184 (42.93%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 4   MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR--- 63
           M++ I + P  A    RP+ S    S++   ++ +P   +L S +V P +   ++ +   
Sbjct: 1   MSSQIALSPAIAAAIRRPS-SHDCLSASATTATATP--MALKSCIVAPLSLFTSQSQIKH 60

Query: 64  ---RFFSEVTVKSDSGTLSSAAAVSA----ATTSLSEDETDEAAAARIGARVRVKVPLKL 123
              R  S  T++ D   + SA +++A    +++  SE+E +  A A+IG+RVRV  PLK+
Sbjct: 61  SSSRKTSRTTIRCDV-AIKSADSINADANPSSSPSSEEEIEAEAKAKIGSRVRVTAPLKV 120

Query: 124 YHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEE 178
           YHV ++PE DLEGMEG LKDYV VWKGKR+SANLPYK+EF   +EGR  VKF++HLKE+E
Sbjct: 121 YHVNRVPEVDLEGMEGKLKDYVAVWKGKRISANLPYKIEFFKEIEGRGLVKFVSHLKEDE 180

[Close]

BLAST of Csor.00g219640 vs. TAIR 10
Match: AT5G08410.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 )

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-29
Identity = 82/185 (44.32%), Postives = 109/185 (58.92%), Query Frame = 0


Query: 4   MANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR--- 63
           M NS  + P     A RP  S     +     S   S++S SS +  P + S + GR   
Sbjct: 1   MTNSYALSPA-IIAAVRPPASQDYLVAASL--SGRKSINSSSSSIFVPISLSTSYGRSKC 60

Query: 64  -----RFFSEVTVKSDSGTLSSAAAVSAATTSLS---EDETDEAAAARIGARVRVKVPLK 123
                R   + T++ D    S+A+  + A  S S   E E DE A  +IGARVRV VPLK
Sbjct: 61  AFSISRKNPKSTIRCDIAVKSAASVDADADLSSSTSLETEEDEKAKEKIGARVRVTVPLK 120

Query: 124 LYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEE 178
           +YHV ++PE +L GMEG +KDYV +WKGK++SANLP+KV+FV  +EGR PVKF  HLKE+
Sbjct: 121 VYHVVRVPEVELMGMEGFIKDYVVLWKGKKISANLPFKVQFVKEIEGRGPVKFFTHLKED 180

The following BLAST results are available for this feature:

BLAST of Csor.00g219640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P80680	6.0e-25	63.53	Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1	[more]
P38365	2.0e-17	36.36	Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oler...	[more]

BLAST of Csor.00g219640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601079.1	3.11e-114	100.00	hypothetical protein SDJN03_06312, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7031885.1	8.91e-114	99.44	hypothetical protein SDJN02_05926, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022957590.1	3.63e-113	98.31	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]
XP_023549490.1	2.98e-112	97.74	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]
XP_022999561.1	2.86e-110	96.61	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]

BLAST of Csor.00g219640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H0Z6	1.76e-113	98.31	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbit...	[more]
A0A6J1KDF2	1.38e-110	96.61	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like OS=Cucurbit...	[more]
A0A0A0KV36	1.13e-94	83.98	FeThRed_A domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 P...	[more]
A0A1S3BEI2	1.31e-93	82.87	ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1CCI1	6.76e-91	82.68	ferredoxin-thioredoxin reductase, variable chain OS=Momordica charantia OX=3673 ...	[more]

BLAST of Csor.00g219640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23440.1	3.1e-29	42.93	ferredoxin/thioredoxin reductase subunit A (variable subunit) 1	[more]
AT5G08410.1	4.1e-29	44.32	ferredoxin/thioredoxin reductase subunit A (variable subunit) 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.30.30.50		coord: 99..177 e-value: 8.3E-29 score: 101.4
IPR004207	Ferredoxin thioredoxin reductase, alpha chain	PFAM	PF02941	FeThRed_A	coord: 101..173 e-value: 9.1E-26 score: 89.8
IPR044166	Ferredoxin-thioredoxin reductase, variable chain	PANTHER	PTHR46937	FERREDOXIN-THIOREDOXIN REDUCTASE, VARIABLE CHAIN	coord: 22..177
IPR008990	Electron transport accessory-like domain superfamily	SUPERFAMILY	50090	Electron transport accessory proteins	coord: 100..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g219640.m01	Csor.00g219640.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0015979	photosynthesis
biological_process	GO:0030148	sphingolipid biosynthetic process
molecular_function	GO:0017050	D-erythro-sphingosine kinase activity
molecular_function	GO:0003951	NAD+ kinase activity