Csor.00g218810 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g218810
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	WPP domain-associated protein
Location	Csor_Chr04: 7070314 .. 7070832 (+)
RNA-Seq Expression	Csor.00g218810
Synteny	Csor.00g218810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTCTGCGAGAAAGCGAATCGCTTTATAAGAAGGCTTTCATCAGAAGATGCCAAAATCTCAGAAAAGCTGAAAATGAGGTTCTATCATCAATTTCTAATACAGATATTTTTCCTTCATTATACATATTCCCCACGCATTCAAAGATACATCCAATTCTGGAAACAATTTTCTGTCATTTAATTGTTTTCCTACATTTCCTATTTGATATACATTAGGTGGATCTTCTAGGGGATCAAGTGGATATACTTCTTAGATTGATTGAGAAAGTATACTTGATTCTGAATCAACAAACACCGGTCTTGCAGCAATATTCTGATGTAAGAGATCCCCAAGTCTACTTTTCTTTATTCTATGTTTATGTACCAATCTCATAGCAATTAACTTGCATTAATTTTAACTGTTACTTTCTTTCAATATCTCTGCAGGTCTCAGAAATTCTCAGGTTGATCAAGGAGCAGGTAGCAGTACTTAGTACACCACCTAAAAAATTAGATACAAGCTCTGATGTTTAA

mRNA sequence

ATGGCTTCTCTGCGAGAAAGCGAATCGCTTTATAAGAAGGCTTTCATCAGAAGATGCCAAAATCTCAGAAAAGCTGAAAATGAGGTGGATCTTCTAGGGGATCAAGTGGATATACTTCTTAGATTGATTGAGAAAGTATACTTGATTCTGAATCAACAAACACCGGTCTTGCAGCAATATTCTGATGTCTCAGAAATTCTCAGGTTGATCAAGGAGCAGGTAGCAGTACTTAGTACACCACCTAAAAAATTAGATACAAGCTCTGATGTTTAA

Coding sequence (CDS)

ATGGCTTCTCTGCGAGAAAGCGAATCGCTTTATAAGAAGGCTTTCATCAGAAGATGCCAAAATCTCAGAAAAGCTGAAAATGAGGTGGATCTTCTAGGGGATCAAGTGGATATACTTCTTAGATTGATTGAGAAAGTATACTTGATTCTGAATCAACAAACACCGGTCTTGCAGCAATATTCTGATGTCTCAGAAATTCTCAGGTTGATCAAGGAGCAGGTAGCAGTACTTAGTACACCACCTAAAAAATTAGATACAAGCTCTGATGTTTAA

Protein sequence

MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQYSDVSEILRLIKEQVAVLSTPPKKLDTSSDV

Homology

[Close]

BLAST of Csor.00g218810 vs. ExPASy Swiss-Prot
Match: O64584 (WPP domain-associated protein OS=Arabidopsis thaliana OX=3702 GN=WAP PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 4.2e-11
Identity = 33/73 (45.21%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 9   SLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQYSDVSEILR 68
           S YK+   ++C +L+KAE EVDLLGD+V+ LL L+EK+Y+ L+  +P+L+ Y  + EILR
Sbjct: 751 STYKQRLEKKCCDLKKAEAEVDLLGDEVETLLDLLEKIYIALDHYSPILKHYPGIIEILR 810

Query: 69  LIKEQVAVLSTPP 82
           L++ +++  S  P
Sbjct: 811 LVRRELSGESKRP 823

[Close]

BLAST of Csor.00g218810 vs. ExPASy Swiss-Prot
Match: Q5BQN5 (WPP domain-associated protein (Fragment) OS=Solanum lycopersicum OX=4081 GN=WAP PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.2e-09
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 4   LRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 61
           LR +  LY++   +RC +L+ AE EVDLLGD+VD LL L+EK+Y+ L+  +PVLQ Y
Sbjct: 771 LRRTTLLYQQRLEKRCSDLKLAEAEVDLLGDEVDTLLSLVEKIYIALDHYSPVLQHY 827

[Close]

BLAST of Csor.00g218810 vs. NCBI nr
Match: KAG6601162.1 (WPP domain-associated protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169 bits (427), Expect = 1.59e-52
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
          MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY
Sbjct: 1  MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60

Query: 61 SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 90
          SDVSEILRLIKEQVAVLSTPPKKLDTSSDV
Sbjct: 61 SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 90

[Close]

BLAST of Csor.00g218810 vs. NCBI nr
Match: KAG7031963.1 (WPP domain-associated protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167 bits (423), Expect = 9.15e-46
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
           MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQ+PVLQQY
Sbjct: 871 MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQSPVLQQY 930

Query: 61  SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 90
           SDVSEILRLIKEQVAVLSTPPKKLDTSSDV
Sbjct: 931 SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 960

[Close]

BLAST of Csor.00g218810 vs. NCBI nr
Match: XP_022985013.1 (uncharacterized protein LOC111483104 [Cucurbita maxima])

HSP 1 Score: 167 bits (423), Expect = 9.21e-46
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
           MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQ+PVLQQY
Sbjct: 878 MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQSPVLQQY 937

Query: 61  SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 90
           SDVSEILRLIKEQVAVLSTPPKKLDTSSDV
Sbjct: 938 SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 967

[Close]

BLAST of Csor.00g218810 vs. NCBI nr
Match: XP_022956940.1 (uncharacterized protein LOC111458475 [Cucurbita moschata])

HSP 1 Score: 166 bits (419), Expect = 3.19e-45
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
           MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQ+PVLQQY
Sbjct: 871 MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQSPVLQQY 930

Query: 61  SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 90
           SDVSEILRLIKEQVAV STPPKKLDTSSDV
Sbjct: 931 SDVSEILRLIKEQVAVFSTPPKKLDTSSDV 960

[Close]

BLAST of Csor.00g218810 vs. NCBI nr
Match: XP_023542201.1 (uncharacterized protein LOC111802165 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164 bits (416), Expect = 8.18e-45
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
           MASL ESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQ+PVLQQY
Sbjct: 877 MASLLESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQSPVLQQY 936

Query: 61  SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 90
           SDVSEILRLIKEQVAVLSTPPKKLDTSSDV
Sbjct: 937 SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 966

[Close]

BLAST of Csor.00g218810 vs. ExPASy TrEMBL
Match: A0A6J1JCB6 (uncharacterized protein LOC111483104 OS=Cucurbita maxima OX=3661 GN=LOC111483104 PE=4 SV=1)

HSP 1 Score: 167 bits (423), Expect = 4.46e-46
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
           MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQ+PVLQQY
Sbjct: 878 MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQSPVLQQY 937

Query: 61  SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 90
           SDVSEILRLIKEQVAVLSTPPKKLDTSSDV
Sbjct: 938 SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 967

[Close]

BLAST of Csor.00g218810 vs. ExPASy TrEMBL
Match: A0A6J1GZ55 (uncharacterized protein LOC111458475 OS=Cucurbita moschata OX=3662 GN=LOC111458475 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 1.55e-45
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
           MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQ+PVLQQY
Sbjct: 871 MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQSPVLQQY 930

Query: 61  SDVSEILRLIKEQVAVLSTPPKKLDTSSDV 90
           SDVSEILRLIKEQVAV STPPKKLDTSSDV
Sbjct: 931 SDVSEILRLIKEQVAVFSTPPKKLDTSSDV 960

[Close]

BLAST of Csor.00g218810 vs. ExPASy TrEMBL
Match: A0A0A0KRK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623390 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 3.23e-35
Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEV------------------DLLGDQVDILLRL 60
           MASL+E++SLYKKAFIRRCQNLRKAENEV                  D+LGDQVDILL L
Sbjct: 12  MASLQENKSLYKKAFIRRCQNLRKAENEVLFSTSNNTDAFHSLYSQVDILGDQVDILLSL 71

Query: 61  IEKVYLILNQQTPVLQQYSDVSEILRLIKEQVAVLS-TPPKKLDTSSDV 90
           IEK+Y ILNQQ+P LQQY DVSEILR I E+V V++ TPP KLDTSSDV
Sbjct: 72  IEKIYSILNQQSPALQQYFDVSEILRSIAEEVPVIACTPPVKLDTSSDV 120

[Close]

BLAST of Csor.00g218810 vs. ExPASy TrEMBL
Match: A0A5D3CG51 (WPP domain-associated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002740 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 3.93e-31
Identity = 69/92 (75.00%), Postives = 79/92 (85.87%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
           MASL+E++SLYKKAFIRRCQNLRKAENEVD+LGDQVDILL LIEK+Y ILNQQ+P LQQY
Sbjct: 596 MASLQENKSLYKKAFIRRCQNLRKAENEVDILGDQVDILLSLIEKIYSILNQQSPALQQY 655

Query: 61  SDV-----SEILRLIKEQVAVL-STPPKKLDT 86
            DV     SEILR I+E+V V+  TPP+KLDT
Sbjct: 656 FDVISLNVSEILRSIEEEVPVIVCTPPEKLDT 687

[Close]

BLAST of Csor.00g218810 vs. ExPASy TrEMBL
Match: A0A2P6SJG3 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0363431 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.74e-22
Identity = 49/74 (66.22%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
           ++SLR+ ESLY++AF RRCQ+LRKAE EVDLLGDQVD+LL L+EK+Y IL + +PVLQQY
Sbjct: 908 ISSLRKKESLYREAFRRRCQDLRKAETEVDLLGDQVDVLLGLLEKIYTILYRHSPVLQQY 967

Query: 61  SDVSEILRLIKEQV 74
            +VS+IL LIK+++
Sbjct: 968 FEVSDILELIKKEL 981

[Close]

BLAST of Csor.00g218810 vs. TAIR 10
Match: AT5G14990.1 (BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to 6001 proteins in 578 species: Archae - 107; Bacteria - 678; Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16; Other Eukaryotes - 2578 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 1.0e-12
Identity = 36/74 (48.65%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 1   MASLRESESLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQY 60
           +A LR+ ES+Y+ AF+ R +NLRKAE EVDLLGDQVD L++L++K     +Q   +L   
Sbjct: 588 IAELRQRESVYRTAFVLRSENLRKAETEVDLLGDQVDSLVKLLQKTLWTFHQHPLLLCNN 647

Query: 61  SDVSEILRLIKEQV 75
           SD+ EI ++IK+++
Sbjct: 648 SDILEISKMIKKEL 661

[Close]

BLAST of Csor.00g218810 vs. TAIR 10
Match: AT2G34730.1 (myosin heavy chain-related )

HSP 1 Score: 68.6 bits (166), Expect = 3.0e-12
Identity = 33/73 (45.21%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 9   SLYKKAFIRRCQNLRKAENEVDLLGDQVDILLRLIEKVYLILNQQTPVLQQYSDVSEILR 68
           S YK+   ++C +L+KAE EVDLLGD+V+ LL L+EK+Y+ L+  +P+L+ Y  + EILR
Sbjct: 751 STYKQRLEKKCCDLKKAEAEVDLLGDEVETLLDLLEKIYIALDHYSPILKHYPGIIEILR 810

Query: 69  LIKEQVAVLSTPP 82
           L++ +++  S  P
Sbjct: 811 LVRRELSGESKRP 823

The following BLAST results are available for this feature:

BLAST of Csor.00g218810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64584	4.2e-11	45.21	WPP domain-associated protein OS=Arabidopsis thaliana OX=3702 GN=WAP PE=1 SV=2	[more]
Q5BQN5	5.2e-09	52.63	WPP domain-associated protein (Fragment) OS=Solanum lycopersicum OX=4081 GN=WAP ...	[more]

BLAST of Csor.00g218810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601162.1	1.59e-52	100.00	WPP domain-associated protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7031963.1	9.15e-46	98.89	WPP domain-associated protein, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_022985013.1	9.21e-46	98.89	uncharacterized protein LOC111483104 [Cucurbita maxima]	[more]
XP_022956940.1	3.19e-45	97.78	uncharacterized protein LOC111458475 [Cucurbita moschata]	[more]
XP_023542201.1	8.18e-45	97.78	uncharacterized protein LOC111802165 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g218810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCB6	4.46e-46	98.89	uncharacterized protein LOC111483104 OS=Cucurbita maxima OX=3661 GN=LOC111483104...	[more]
A0A6J1GZ55	1.55e-45	97.78	uncharacterized protein LOC111458475 OS=Cucurbita moschata OX=3662 GN=LOC1114584...	[more]
A0A0A0KRK0	3.23e-35	66.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623390 PE=4 SV=1	[more]
A0A5D3CG51	3.93e-31	75.00	WPP domain-associated protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A2P6SJG3	6.74e-22	66.22	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0363431 PE=4...	[more]

BLAST of Csor.00g218810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14990.1	1.0e-12	48.65	BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT2...	[more]
AT2G34730.1	3.0e-12	45.21	myosin heavy chain-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..42
IPR037490	WPP domain-associated protein	PANTHER	PTHR33883	WPP DOMAIN-ASSOCIATED PROTEIN	coord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g218810.m01	Csor.00g218810.m01	mRNA