Csor.00g218450 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTCACAGAGAAGGAAGAAGGTTTGGTGAAGGAATCATGGGATGTTTTGAGCAAGGATTTGCCTCTCTACAGCCTTCATTTCTTTACTCAGTGAGTATTAATTAATTACCTTTTATTTATTTATTTTTACGAATAAATGGTGGTTTATTTTATTTATTATTTTTACTGTAATAATGGAAGGATATTGGAGATAGCTCCAGCAGCAAAGGGCATGTTTTCTTTCTTAAGGGAATCTGAACAGATTCCTCAGAACAATCCTAAGCTTAAGGCTCATGCACTCAAGGTTTTCAAGATGGTGAGTTTTTATTTTATTTTATTTATTTTATTTATTTTTCGCACAAATTTATTAGACGAAAATTGAGATTTAGAACGATGTGGGTGTGTGAGTTGGAATGGAATTTTGGACTCGTAATTGTCACACCGGTCTTGGGTCATAGTTTTGGTCCGAATTTTAATAGATTTCTACTGAAAAGTTAATTTTCGGGTGGAACTCATTTTTCAGATCTAGTTAGTAAAGTTAAAACATAATTTTACAAACGGAGTTTAAGTTTGGCTTCATAACTTCGAACGATATACAAAATGTAAGCTCAACTCAACCAAATGCTTGTTCGATATATGATGATTAATGTTGAAACTACTAAATTACATTTTTGGTGATGCAAACATTTGAAGTGAGTTGAAATGTTGTTGGATTGTAAACTAAAAGAAAAAAAAATGAAAAAATTGCAGACATGTGAAGCAGCCATTCAGCTGCGAGAGAAGGGGGAAGTGGTGGTCTCTGAGACTACCCTACAATATTTGGGCTCTGTCCACCTTCGTAATGGAGTCATTGATCCACATTTTGAGGTAACCTTTCAAATCACTTAATTTTTTTTTTTTTTTTAAATTTTGTATAATTTTTTCAAAATCTAAATTTAATAGAGTTTAAGGACCTATTAGATAATTATTTAAAGTTTAAGGAACCCAACAACTCTAATTTCAATAATTGAGTGGTGACTGAATCTAAAAAATTTAATGTCGAGACATTCAGGTGGTGAAAGAGGCATTGCTACGAACAGTGAAGAAAGGAATGGGAGAGAAATGGAGCGAGGAAATGGGCAATGCCTGGACCCGGGCTTACGACCAATTGGCTTCAGCAATCAAAGCTGAAATGAAATAA ATGGAATTCACAGAGAAGGAAGAAGGTTTGGTGAAGGAATCATGGGATGTTTTGAGCAAGGATTTGCCTCTCTACAGCCTTCATTTCTTTACTCAGATATTGGAGATAGCTCCAGCAGCAAAGGGCATGTTTTCTTTCTTAAGGGAATCTGAACAGATTCCTCAGAACAATCCTAAGCTTAAGGCTCATGCACTCAAGGTTTTCAAGATGACATGTGAAGCAGCCATTCAGCTGCGAGAGAAGGGGGAAGTGGTGGTCTCTGAGACTACCCTACAATATTTGGGCTCTGTCCACCTTCGTAATGGAGTCATTGATCCACATTTTGAGGTGGTGAAAGAGGCATTGCTACGAACAGTGAAGAAAGGAATGGGAGAGAAATGGAGCGAGGAAATGGGCAATGCCTGGACCCGGGCTTACGACCAATTGGCTTCAGCAATCAAAGCTGAAATGAAATAA ATGGAATTCACAGAGAAGGAAGAAGGTTTGGTGAAGGAATCATGGGATGTTTTGAGCAAGGATTTGCCTCTCTACAGCCTTCATTTCTTTACTCAGATATTGGAGATAGCTCCAGCAGCAAAGGGCATGTTTTCTTTCTTAAGGGAATCTGAACAGATTCCTCAGAACAATCCTAAGCTTAAGGCTCATGCACTCAAGGTTTTCAAGATGACATGTGAAGCAGCCATTCAGCTGCGAGAGAAGGGGGAAGTGGTGGTCTCTGAGACTACCCTACAATATTTGGGCTCTGTCCACCTTCGTAATGGAGTCATTGATCCACATTTTGAGGTGGTGAAAGAGGCATTGCTACGAACAGTGAAGAAAGGAATGGGAGAGAAATGGAGCGAGGAAATGGGCAATGCCTGGACCCGGGCTTACGACCAATTGGCTTCAGCAATCAAAGCTGAAATGAAATAA MEFTEKEEGLVKESWDVLSKDLPLYSLHFFTQILEIAPAAKGMFSFLRESEQIPQNNPKLKAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKGMGEKWSEEMGNAWTRAYDQLASAIKAEMK Homology
BLAST of Csor.00g218450 vs. ExPASy Swiss-Prot
Match: O24521 (Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana OX=3702 GN=AHB2 PE=1 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 2.8e-63 Identity = 112/149 (75.17%), Postives = 139/149 (93.29%), Query Frame = 0
BLAST of Csor.00g218450 vs. ExPASy Swiss-Prot
Match: Q941Q2 (Non-symbiotic hemoglobin 2 OS=Brassica napus OX=3708 GN=HB2 PE=3 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 1.4e-62 Identity = 111/149 (74.50%), Postives = 138/149 (92.62%), Query Frame = 0
BLAST of Csor.00g218450 vs. ExPASy Swiss-Prot
Match: Q93Y92 (Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum OX=3635 GN=HB2 PE=3 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 6.8e-62 Identity = 117/152 (76.97%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of Csor.00g218450 vs. ExPASy Swiss-Prot
Match: Q941P9 (Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum OX=4081 GN=HB2 PE=2 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.0e-57 Identity = 105/150 (70.00%), Postives = 129/150 (86.00%), Query Frame = 0
BLAST of Csor.00g218450 vs. ExPASy Swiss-Prot
Match: P08054 (Hemoglobin-1 OS=Casuarina glauca OX=3522 PE=1 SV=2) HSP 1 Score: 186.0 bits (471), Expect = 3.1e-46 Identity = 85/151 (56.29%), Postives = 115/151 (76.16%), Query Frame = 0
BLAST of Csor.00g218450 vs. NCBI nr
Match: KAG6601197.1 (Non-symbiotic hemoglobin 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 301 bits (770), Expect = 6.90e-103 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of Csor.00g218450 vs. NCBI nr
Match: XP_022956839.1 (non-symbiotic hemoglobin 2 [Cucurbita moschata]) HSP 1 Score: 297 bits (760), Expect = 2.31e-101 Identity = 148/151 (98.01%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of Csor.00g218450 vs. NCBI nr
Match: XP_023531346.1 (non-symbiotic hemoglobin 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 296 bits (757), Expect = 6.63e-101 Identity = 147/151 (97.35%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of Csor.00g218450 vs. NCBI nr
Match: XP_022984835.1 (non-symbiotic hemoglobin 2 [Cucurbita maxima]) HSP 1 Score: 284 bits (726), Expect = 3.54e-96 Identity = 141/151 (93.38%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of Csor.00g218450 vs. NCBI nr
Match: XP_038891898.1 (non-symbiotic hemoglobin 2 [Benincasa hispida]) HSP 1 Score: 283 bits (723), Expect = 1.02e-95 Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of Csor.00g218450 vs. ExPASy TrEMBL
Match: A0A6J1H076 (non-symbiotic hemoglobin 2 OS=Cucurbita moschata OX=3662 GN=LOC111458415 PE=3 SV=1) HSP 1 Score: 297 bits (760), Expect = 1.12e-101 Identity = 148/151 (98.01%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of Csor.00g218450 vs. ExPASy TrEMBL
Match: A0A6J1J9P1 (non-symbiotic hemoglobin 2 OS=Cucurbita maxima OX=3661 GN=LOC111482997 PE=3 SV=1) HSP 1 Score: 284 bits (726), Expect = 1.71e-96 Identity = 141/151 (93.38%), Postives = 146/151 (96.69%), Query Frame = 0
BLAST of Csor.00g218450 vs. ExPASy TrEMBL
Match: A0A0A0KTH6 (GLOBIN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G621920 PE=3 SV=1) HSP 1 Score: 275 bits (702), Expect = 7.83e-93 Identity = 134/151 (88.74%), Postives = 145/151 (96.03%), Query Frame = 0
BLAST of Csor.00g218450 vs. ExPASy TrEMBL
Match: A0A5A7SU63 (Non-symbiotic hemoglobin 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002270 PE=3 SV=1) HSP 1 Score: 274 bits (700), Expect = 1.58e-92 Identity = 135/151 (89.40%), Postives = 144/151 (95.36%), Query Frame = 0
BLAST of Csor.00g218450 vs. ExPASy TrEMBL
Match: A0A1S3BFZ4 (non-symbiotic hemoglobin 2 OS=Cucumis melo OX=3656 GN=LOC103489422 PE=3 SV=1) HSP 1 Score: 274 bits (700), Expect = 1.58e-92 Identity = 135/151 (89.40%), Postives = 144/151 (95.36%), Query Frame = 0
BLAST of Csor.00g218450 vs. TAIR 10
Match: AT3G10520.1 (haemoglobin 2 ) HSP 1 Score: 242.7 bits (618), Expect = 2.0e-64 Identity = 112/149 (75.17%), Postives = 139/149 (93.29%), Query Frame = 0
BLAST of Csor.00g218450 vs. TAIR 10
Match: AT2G16060.1 (hemoglobin 1 ) HSP 1 Score: 161.4 bits (407), Expect = 5.7e-40 Identity = 81/148 (54.73%), Postives = 103/148 (69.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|