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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGGGCTATAGCTTCGTCAACTTTGGTTGGCTTCAAGAAAAGAAGCGGTTCTCCCCATGTTCTGGATTATTTCTCTTCGCCAGCCAGTGCTGATGACAAAGTCTGCAGAGTCAAAAGTTCTTGGAAGTGAGGCTTTATTAAAGGGCTTTGATGGGGGAGGCTTTTTAGAGTGCAGTCTATGATTATGACGTGCTATTCAGTCTCAATGAAATTTGCCAAAAGGAGTCCAATTCGAGCCATCTTTTGTTGGATGGATTTGGCACCGAGGATCTTCAAAAAGTGGGAATTTATACTAGGCGGGACGGAAGGGCACTGAAAGAGAAAATCGAACATCTTTACGATTTCCTCCTTTAA mRNA sequence ATGAGGGCTATAGCTTCGTCAACTTTGGTTGGCTTCAAGAAAAGAAGCGGTTCTCCCCATGTTCTGGATTATTTCTCTTCGCCAGCCAGTGCTGATGACAAAGTCTGCAGAGTCAAAAGTTCTTGGAATCTCAATGAAATTTGCCAAAAGGAGTCCAATTCGAGCCATCTTTTGTTGGATGGATTTGGCACCGAGGATCTTCAAAAAGTGGGAATTTATACTAGGCGGGACGGAAGGGCACTGAAAGAGAAAATCGAACATCTTTACGATTTCCTCCTTTAA Coding sequence (CDS) ATGAGGGCTATAGCTTCGTCAACTTTGGTTGGCTTCAAGAAAAGAAGCGGTTCTCCCCATGTTCTGGATTATTTCTCTTCGCCAGCCAGTGCTGATGACAAAGTCTGCAGAGTCAAAAGTTCTTGGAATCTCAATGAAATTTGCCAAAAGGAGTCCAATTCGAGCCATCTTTTGTTGGATGGATTTGGCACCGAGGATCTTCAAAAAGTGGGAATTTATACTAGGCGGGACGGAAGGGCACTGAAAGAGAAAATCGAACATCTTTACGATTTCCTCCTTTAA Protein sequence MRAIASSTLVGFKKRSGSPHVLDYFSSPASADDKVCRVKSSWNLNEICQKESNSSHLLLDGFGTEDLQKVGIYTRRDGRALKEKIEHLYDFLL
Homology
BLAST of Csor.00g218180 vs. NCBI nr
Match: KAG6575281.1 (hypothetical protein SDJN03_25920, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 191 bits (485), Expect = 2.79e-61 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 Query: 1 MRAIASSTLVGFKKRSGSPHVLDYFSSPASADDKVCRVKSSWNLNEICQKESNSSHLLLD 60 MRAIASSTLVGFKKRSGSPHVLDYFSSPASADDKVCRVKSSWNLNEICQKESNSSHLLLD Sbjct: 1 MRAIASSTLVGFKKRSGSPHVLDYFSSPASADDKVCRVKSSWNLNEICQKESNSSHLLLD 60
Query: 61 GFGTEDLQKVGIYTRRDGRALKEKIEHLYDFLL 93 GFGTEDLQKVGIYTRRDGRALKEKIEHLYDFLL Sbjct: 61 GFGTEDLQKVGIYTRRDGRALKEKIEHLYDFLL 93
BLAST of Csor.00g218180 vs. NCBI nr
Match: KAG6585885.1 (hypothetical protein SDJN03_18618, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179 bits (454), Expect = 1.50e-56 Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 0 Query: 1 MRAIASSTLVGFKKRSGSPHVLDYFSSPASADDKVCRVKSSWNLNEICQKESNSSHLLLD 60 MRAIASSTLVGFKKRSGSPHVLDYFSSPASADDKV RVKSSWNLNEICQKESNSSHLLLD Sbjct: 1 MRAIASSTLVGFKKRSGSPHVLDYFSSPASADDKVRRVKSSWNLNEICQKESNSSHLLLD 60
Query: 61 GFGTEDLQKVGIYTRRDGRALKEKIEHLYDFLL 93 GFGTEDL+KVGIYT RDGRALKEKIEHLYD LL Sbjct: 61 GFGTEDLKKVGIYTGRDGRALKEKIEHLYDCLL 93
BLAST of Csor.00g218180 vs. NCBI nr
Match: KAG6585942.1 (hypothetical protein SDJN03_18675, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175 bits (444), Expect = 5.03e-55 Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 0 Query: 1 MRAIASSTLVGFKKRSGSPHVLDYFSSPASADDKVCRVKSSWNLNEICQKESNSSHLLLD 60 M+AIASST VGFKKRSGSPHVLDYFS PASADDKV RVKSSWNLNEICQKESNSSHLLLD Sbjct: 1 MKAIASSTFVGFKKRSGSPHVLDYFSWPASADDKVRRVKSSWNLNEICQKESNSSHLLLD 60
Query: 61 GFGTEDLQKVGIYTRRDGRALKEKIEHLYDFLL 93 GFGTEDLQKVGIYT RDGRALKEKIEHLYD LL Sbjct: 61 GFGTEDLQKVGIYTGRDGRALKEKIEHLYDCLL 93
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6575281.1 | 2.79e-61 | 100.00 | hypothetical protein SDJN03_25920, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6585885.1 | 1.50e-56 | 95.70 | hypothetical protein SDJN03_18618, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6585942.1 | 5.03e-55 | 93.55 | hypothetical protein SDJN03_18675, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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