Csor.00g218070 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g218070
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	CTP:phosphoethanolamine cytidylyltransferase
Location	Csor_Chr10: 1719360 .. 1719698 (+)
RNA-Seq Expression	Csor.00g218070
Synteny	Csor.00g218070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTTTGATCTCATGCATTTTGGGTCATGCCAATGCGTTGAGGCAAGCTAAGGCGTTGGGAGATGAGTTGGTGGTGGGTGTTGTAAGTGACGAAGAGATCATAGCCAATAAGGGTCCCCCAGTGTTACCAATGGAAGAAAGGTATCCGCTGAAATCTTATTGAATTTGTAGCAAAGCACTGTAAAAGATTTTGTAGGTTCCCGCAATAATTTGCTCAGTTTTTACCTAACCAAGGGCTCCTTGTAGGCTGGCTCTTGTAAGTGGTTTGAAGTGGGTGGATGAAGTTATTGCCAACGCCCCATATGGTGGAGTGCAATTACCGAGCAATTCATGA

mRNA sequence

ATGGCTGTTTTGATCTCATGCATTTTGGGTCATGCCAATGCGTTGAGGCAAGCTAAGGCGTTGGGAGATGAGTTGGTGGTGGGTGTTGTAAGTGACGAAGAGATCATAGCCAATAAGGGTCCCCCAGTGTTACCAATGGAAGAAAGGCTGGCTCTTGTAAGTGGTTTGAAGTGGGTGGATGAAGTTATTGCCAACGCCCCATATGGTGGAGTGCAATTACCGAGCAATTCATGA

Coding sequence (CDS)

ATGGCTGTTTTGATCTCATGCATTTTGGGTCATGCCAATGCGTTGAGGCAAGCTAAGGCGTTGGGAGATGAGTTGGTGGTGGGTGTTGTAAGTGACGAAGAGATCATAGCCAATAAGGGTCCCCCAGTGTTACCAATGGAAGAAAGGCTGGCTCTTGTAAGTGGTTTGAAGTGGGTGGATGAAGTTATTGCCAACGCCCCATATGGTGGAGTGCAATTACCGAGCAATTCATGA

Protein sequence

MAVLISCILGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPYGGVQLPSNS

Homology

[Close]

BLAST of Csor.00g218070 vs. ExPASy Swiss-Prot
Match: Q9ZVI9 (Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=PECT1 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 69
           GH NALRQA+ALGD+LVVGVVSDEEIIANKGPPV P+ ER+ +V  +KWVDEVI++APY
Sbjct: 69  GHCNALRQARALGDQLVVGVVSDEEIIANKGPPVTPLHERMTMVKAVKWVDEVISDAPY 127

[Close]

BLAST of Csor.00g218070 vs. ExPASy Swiss-Prot
Match: Q5EA75 (Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus OX=9913 GN=PCYT2 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.2e-15
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 10 GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 69
          GH+N LRQA+A+GD L+VGV +DEEI  +KGPPV   EER  +V  +KWVDEV+  APY
Sbjct: 37 GHSNQLRQARAMGDHLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPY 95

[Close]

BLAST of Csor.00g218070 vs. ExPASy Swiss-Prot
Match: Q99447 (Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens OX=9606 GN=PCYT2 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.4e-15
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 10 GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 69
          GH+N LRQA+A+GD L+VGV +DEEI  +KGPPV   EER  +V  +KWVDEV+  APY
Sbjct: 37 GHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPY 95

[Close]

BLAST of Csor.00g218070 vs. ExPASy Swiss-Prot
Match: Q922E4 (Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus OX=10090 GN=Pcyt2 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.4e-15
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 10 GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 69
          GH+N LRQA+A+GD L+VGV +DEEI  +KGPPV   EER  +V  +KWVDEV+  APY
Sbjct: 37 GHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPY 95

[Close]

BLAST of Csor.00g218070 vs. ExPASy Swiss-Prot
Match: O88637 (Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.4e-15
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 10 GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 69
          GH+N LRQA+A+GD L+VGV +DEEI  +KGPPV   EER  +V  +KWVDEV+  APY
Sbjct: 37 GHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPY 95

[Close]

BLAST of Csor.00g218070 vs. NCBI nr
Match: KAG6589665.1 (Ethanolamine-phosphate cytidylyltransferase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153 bits (387), Expect = 7.98e-47
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAVLISCILGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVD 60
          MAVLISCILGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVD
Sbjct: 1  MAVLISCILGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVD 60

Query: 61 EVIANAPYGGVQLPSNS 77
          EVIANAPYGGVQLPSNS
Sbjct: 61 EVIANAPYGGVQLPSNS 77

[Close]

BLAST of Csor.00g218070 vs. NCBI nr
Match: MBA0679677.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 120 bits (300), Expect = 1.83e-31
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPYG 69
           GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVD+VIANAPY 
Sbjct: 81  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDQVIANAPYA 140

Query: 70  GVQLPSNS 77
             +   NS
Sbjct: 141 ITEQFMNS 148

[Close]

BLAST of Csor.00g218070 vs. NCBI nr
Match: MBA0795811.1 (hypothetical protein [Gossypium harknessii])

HSP 1 Score: 120 bits (300), Expect = 3.32e-31
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPYG 69
           GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVD+VIANAPY 
Sbjct: 81  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDQVIANAPYA 140

Query: 70  GVQLPSNS 77
             +   NS
Sbjct: 141 ITEQFMNS 148

[Close]

BLAST of Csor.00g218070 vs. NCBI nr
Match: KAG7021673.1 (Ethanolamine-phosphate cytidylyltransferase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119 bits (299), Expect = 4.58e-31
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 68
           GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVI+NAPY
Sbjct: 82  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVISNAPY 140

[Close]

BLAST of Csor.00g218070 vs. NCBI nr
Match: MBA0826110.1 (hypothetical protein [Gossypium armourianum])

HSP 1 Score: 120 bits (300), Expect = 5.99e-31
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPYG 69
           GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVD+VIANAPY 
Sbjct: 81  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDQVIANAPYA 140

Query: 70  GVQLPSNS 77
             +   NS
Sbjct: 141 ITEQFMNS 148

[Close]

BLAST of Csor.00g218070 vs. ExPASy TrEMBL
Match: A0A7J8WX92 (CTP:phosphoethanolamine cytidylyltransferase (Fragment) OS=Gossypium aridum OX=34290 GN=Goari_011434 PE=3 SV=1)

HSP 1 Score: 120 bits (300), Expect = 8.88e-32
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPYG 69
           GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVD+VIANAPY 
Sbjct: 81  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDQVIANAPYA 140

Query: 70  GVQLPSNS 77
             +   NS
Sbjct: 141 ITEQFMNS 148

[Close]

BLAST of Csor.00g218070 vs. ExPASy TrEMBL
Match: A0A7J9GE99 (CTP:phosphoethanolamine cytidylyltransferase OS=Gossypium harknessii OX=34285 GN=Gohar_006644 PE=3 SV=1)

HSP 1 Score: 120 bits (300), Expect = 1.61e-31
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPYG 69
           GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVD+VIANAPY 
Sbjct: 81  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDQVIANAPYA 140

Query: 70  GVQLPSNS 77
             +   NS
Sbjct: 141 ITEQFMNS 148

[Close]

BLAST of Csor.00g218070 vs. ExPASy TrEMBL
Match: A0A7J9IVF5 (CTP:phosphoethanolamine cytidylyltransferase (Fragment) OS=Gossypium armourianum OX=34283 GN=Goarm_010996 PE=3 SV=1)

HSP 1 Score: 120 bits (300), Expect = 2.90e-31
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPYG 69
           GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVD+VIANAPY 
Sbjct: 81  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDQVIANAPYA 140

Query: 70  GVQLPSNS 77
             +   NS
Sbjct: 141 ITEQFMNS 148

[Close]

BLAST of Csor.00g218070 vs. ExPASy TrEMBL
Match: B9SJR7 (CTP:phosphoethanolamine cytidylyltransferase OS=Ricinus communis OX=3988 GN=RCOM_0907340 PE=3 SV=1)

HSP 1 Score: 120 bits (302), Expect = 5.37e-31
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 10 GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 68
          GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY
Sbjct: 34 GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 92

[Close]

BLAST of Csor.00g218070 vs. ExPASy TrEMBL
Match: A0A6J1C103 (CTP:phosphoethanolamine cytidylyltransferase OS=Momordica charantia OX=3673 GN=LOC111007046 PE=3 SV=1)

HSP 1 Score: 120 bits (302), Expect = 9.85e-31
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 68
           GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY
Sbjct: 82  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 140

[Close]

BLAST of Csor.00g218070 vs. TAIR 10
Match: AT2G38670.1 (phosphorylethanolamine cytidylyltransferase 1 )

HSP 1 Score: 100.1 bits (248), Expect = 8.0e-22
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 10  GHANALRQAKALGDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAPY 69
           GH NALRQA+ALGD+LVVGVVSDEEIIANKGPPV P+ ER+ +V  +KWVDEVI++APY
Sbjct: 69  GHCNALRQARALGDQLVVGVVSDEEIIANKGPPVTPLHERMTMVKAVKWVDEVISDAPY 127

[Close]

BLAST of Csor.00g218070 vs. TAIR 10
Match: AT2G32260.1 (phosphorylcholine cytidylyltransferase )

HSP 1 Score: 47.0 bits (110), Expect = 8.0e-06
Identity = 27/62 (43.55%), Postives = 34/62 (54.84%), Query Frame = 0


Query: 10  GHANALRQAKAL---GDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANA 69
           GHA +L QAK        L+VG  +DE     KG  V+  EER   +   KWVDEVI +A
Sbjct: 49  GHARSLEQAKLAFPNNTYLLVGCCNDETTHKYKGRTVMTAEERYESLRHCKWVDEVIPDA 108

[Close]

BLAST of Csor.00g218070 vs. TAIR 10
Match: AT4G15130.1 (phosphorylcholine cytidylyltransferase2 )

HSP 1 Score: 44.3 bits (103), Expect = 5.2e-05
Identity = 26/61 (42.62%), Postives = 33/61 (54.10%), Query Frame = 0


Query: 10 GHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLPMEERLALVSGLKWVDEVIANAP 69
          GHA A+ QAK       L+VG  +DE     KG  V+   ER   +   KWVDEVI +AP
Sbjct: 35 GHARAIEQAKKSFPNTYLLVGCCNDEITNKFKGKTVMTESERYESLRHCKWVDEVIPDAP 94

The following BLAST results are available for this feature:

BLAST of Csor.00g218070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVI9	1.1e-20	76.27	Ethanolamine-phosphate cytidylyltransferase OS=Arabidopsis thaliana OX=3702 GN=P...	[more]
Q5EA75	3.2e-15	61.02	Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus OX=9913 GN=PCYT2 PE=2 ...	[more]
Q99447	5.4e-15	61.02	Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens OX=9606 GN=PCYT2 PE=...	[more]
Q922E4	5.4e-15	61.02	Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus OX=10090 GN=Pcyt2 PE...	[more]
O88637	5.4e-15	61.02	Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcy...	[more]

BLAST of Csor.00g218070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589665.1	7.98e-47	100.00	Ethanolamine-phosphate cytidylyltransferase, partial [Cucurbita argyrosperma sub...	[more]
MBA0679677.1	1.83e-31	88.24	hypothetical protein [Gossypium aridum]	[more]
MBA0795811.1	3.32e-31	88.24	hypothetical protein [Gossypium harknessii]	[more]
KAG7021673.1	4.58e-31	98.31	Ethanolamine-phosphate cytidylyltransferase [Cucurbita argyrosperma subsp. argyr...	[more]
MBA0826110.1	5.99e-31	88.24	hypothetical protein [Gossypium armourianum]	[more]

BLAST of Csor.00g218070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J8WX92	8.88e-32	88.24	CTP:phosphoethanolamine cytidylyltransferase (Fragment) OS=Gossypium aridum OX=3...	[more]
A0A7J9GE99	1.61e-31	88.24	CTP:phosphoethanolamine cytidylyltransferase OS=Gossypium harknessii OX=34285 GN...	[more]
A0A7J9IVF5	2.90e-31	88.24	CTP:phosphoethanolamine cytidylyltransferase (Fragment) OS=Gossypium armourianum...	[more]
B9SJR7	5.37e-31	100.00	CTP:phosphoethanolamine cytidylyltransferase OS=Ricinus communis OX=3988 GN=RCOM...	[more]
A0A6J1C103	9.85e-31	100.00	CTP:phosphoethanolamine cytidylyltransferase OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Csor.00g218070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38670.1	8.0e-22	76.27	phosphorylethanolamine cytidylyltransferase 1	[more]
AT2G32260.1	8.0e-06	43.55	phosphorylcholine cytidylyltransferase	[more]
AT4G15130.1	5.2e-05	42.62	phosphorylcholine cytidylyltransferase2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 7..72 e-value: 8.5E-23 score: 83.0
IPR004821	Cytidyltransferase-like domain	TIGRFAM	TIGR00125	TIGR00125	coord: 9..62 e-value: 6.6E-14 score: 49.8
IPR004821	Cytidyltransferase-like domain	PFAM	PF01467	CTP_transf_like	coord: 9..69 e-value: 3.9E-11 score: 43.3
None	No IPR available	PANTHER	PTHR45780:SF5	CYTIDYLYLTRANSFERASE FAMILY PROTEIN, EXPRESSED	coord: 9..68
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 9..68
IPR044608	Ethanolamine-phosphate cytidylyltransferase	PANTHER	PTHR45780	ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE	coord: 9..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g218070.m01	Csor.00g218070.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006646	phosphatidylethanolamine biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004306	ethanolamine-phosphate cytidylyltransferase activity
molecular_function	GO:0003824	catalytic activity