Csor.00g217960 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g217960
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Membrane fusion protein Use1
Location	Csor_Chr10: 1766012 .. 1770796 (+)
RNA-Seq Expression	Csor.00g217960
Synteny	Csor.00g217960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGAAAGAGTATCGGATTTGGGGAAGACGGCGGCGGAGGAGACGACGGTGGACTTTTGATTTTAGAAGCGAAGAGAAAGCTCTCTGGCTGTTTTTGACTACGAGCAAGGTGGAGTGAGGAGGAAGGCGAAAATTTCCACGTCAGCATAAGGAAAATAAAAAACTTAATCTTAATTAATGAATAATTAAACGCAAACAATTAAGTATTAAATTAAAGCTTAATAAATATTTGATAATAAAATTACGTTTTAACGTTTCACGTAGATTTAATAATAAAATTAATAAAAAATAAAAAAAAGAAAGTAAGAAAAAGCCCCTTCTCATTTTCTTGTTCGCTCTTGGCTCCCAGCGACCGGCAGCCGTACCCTCGCCTCCGATATATTTCTTCCGGCAGCCCCTTGGCGGGAAATTTTATTTCTTCTCGTCGTATCTCCCTTTCTGCTGCTGCCTCACGCCGACACGCCGATTTCTGTGTGTTTAGAGAGGTTAGTTTTAAGTTCTACCTGTTATCGTGATCTTAATTTGTTCTGTTTGAAATATCAAATCCTGTCGCTGCTGCTTTTGTTTCTCGACATTGGATCGGACAGAATTAGATAATATTGGAAATGGATCTCAGTTTACTGGTTAATTGGTTTAGATTTGAAGCCTAAGTAGCAGGCGATTGGGAGCGTGTAAATTAAATTTCTTGAATGTGAATTAGTTTTTATCGCGGAGTTCTTTTGTGATTGAGCTAAGATAAGATTTGATGATGGATTGTAACAAAGAAAAAGAAAAGATCTCGGTTTTGTTCTGTTCTTCTGAGGTCGTAATTGTTATTACTTCACTTCCATGGAAACGAAATTGTAAGTTTTACATTTTTTGTAGATTTCATTGATGTAGACTTCCGAATCCTGTGCTTCATTATACTGATGATTCATAGAGGCATACTCTAATGGCAATTCCTTACCGTGTTTAGATACTACATAACTGGATTGTGCGGATGCGTGCGTGTGATTGTTGAATAGCTTGGAATGTTCACTTTTCTCTTGAATCTGTAGGATTCTTTTCCTCTTTTCTAAATGGGTTTAAGTAAAACTGAAATCAACTTGAAGCGGCTGCTGGCAACTGCCCCTCATCAGAAGGATCAGGCTAAACTTATACACGTACGTCCAGATGATTGAGTGAAAGTTTCAATTGGTTTGATTTTTAGTCATGTAAAAGTGATTTGAAGATCATTATTCATTTTGGCCCAACTATTCTTGCAGTATGTGACTACTCTAAGAGAACAGTTGGAGCAACTTGCAGAAGAGAAAACACCCGATGGTATATCAAGGTTGGTATGATTCATCCCTCACTTCCCCATTGTTTCCAGTGTCAATCCACCATAGATATAACAGTCCAAGCCCATTGTTAGCAGATATTGTCCTCTTTGAGTTTTCCCTTTCGGGCTTTCCCTCAAGGTTTTTAAAAAGCGTCGCTACGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTTTTCTCCACAACCGATGTGGGATCTCACAATCCACCTCCTTCGGGGCCCAGCGTCCTTACTGGCACACCGTCTTGTGTCCACCCCCCTCGGGGCTCAGCCTCCATGCAAGCACACCGCACGGTGTTTGGCTTTGATAGCATTTGTAACGGCCGAAGCCCACCGCTAGTAGATATTGCCTCTTTAAGCTTCCCTCAAGGTTTTTAAAACGCTGCTAGGGAGAGGTTTCCACCCTTATAAAGAAAGCTTTGTTTTCCTCCCCAACCGAGGTGGGATCTCACATTATAACTTGGACTATTTTTTATTACTTTTGTACTCTCAATTTGCACGAGGTTAGATTCAACCTCATTGAACATAAACTGTTCTAGGAGCTTGTTTTGGTAAATATCTTTTCTGAGATTTTCTAATCTGGTCCCCCGTACTATGTGCTGTTAGTTTCTTTGTGCAGAGTTTCCAAGGCTTTGCTTGGTGATTATGCAGAGAAGATAGAGGCCATTGCTTCAAAATTAGCTGTTCCTTTGGTACACTTACATGGGTTTGGTTGTTTTAAATCTGTTCTATGTTAAGTTTCAAGATTATGGAACTTCCCGGCATCAAAATCCCCTATCTGAATCAGTTTTTGTGTTAGCTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGAAGTTTTTTTTTCTTCCCTCTCTCCTTGGAATTTAAAGCATCTTTCCCGTCAAAAAGATTGAAATTCTCTTGTGGTGTTTCTGTACCAATATCACTCATCTGGATCCATCTTTTGCTTGAATTTTTTGTGTATATACCAAGGATAATATTAAATGGTTACTTCATCTTTGATGGTTTGTGTTCTTGTGCTTGCATGTGGTGCAGTCTTGTCTCTTTTACTTAATGTTTTGGTCAACTTGCAGCCTGATGAGGAAGAGTCTTCTGAGCCCTCTACAAGTACTTCTGTTAAAGAATTTTCTTCTGTGACAGAAGGAGAAATAAACGCCCCCCATTCACCTCCGGGGCTAAGGAGGAGATTTCTGTGCGTGGCTCACATTAGGATTTATGTGACACTGAATCGTTATTGAAGTTTCTTTTTATCAAACCAATGTTATTATATTACTGTGTAGGCCTTCTTCCTCTGTTGTGGAGGATAGATCTCATGGGACCATCAAAGAAGACTCGTCAGCACCTGTCAAGTTGGATGCTGCAGCAATATCCCACATCGAGAAACACAGGTACTGGTAGTTTCAAGTATTTTTAATAAATCTTGCACTTTTTCCCCGTATAGCTTACTATGATATATGATGAATCTTATGTAAGGTTAGTTATTAAATAAAGAATATAGATTACAATAGATTACAATACAAATTCAGATAAGAAACCAATCAAGGGAAAAAACCCTATACGTAATGGCTATACCAAGATAAAAATTTCATTAGGGAGATCTGTGAGTTCTGATGAAACATCTACGACTTTCAATAATACTTAAATGAAGTGGACAATCGAGGCTCGATAATGTGGCTACTAGAACTGACTATAGGAAAAAAAAAACATTGGCTTTAGTTGCATGTTGTTTGTTGACATTACTTTCCTTATGCTTACAGTCTATCATGAAAACCATTATTTATTCACTTTGGTAGGAAGCTTCAAGAGGACTTGACCGATGAAATGGTTGGGCTAGCGAGGCAATTGAAAGAGAGCAGTCTGATAATGAGCAAATCTTTGGAAAGCACTGAAAAGGTACATGTTCTCTACTAATTGTTCGCTGTCGACGTAGTAGAAAGTGGAGATTTTATGCATCTGATTTCTTTAAAATACACACGAACACTAGAAAAATCAAAATAAATTTTTTTGCTTCTTCTCCATATTCAAAGCGTACTATGATGAATTCTCGCTCTTCAGTGAGTTAGCTGCTTTATATAAATGTCATGGAATTGAAGGCTTTCTGTTTCTGGGACATGCATTCAGAGGGCTGTTTTCCTTAAAGTTGAAATTTGTATTAAATCTAACTCTGGAATTAACTCTGCAAAGTGAATTAGAACTCAATGAAGGGCTAAATACTGCCATAATCGCCTACTTCAACTTTTGGGAATCTGACCTTTCGTCAGAAGATTAGAAGTTGTGGAATACAATGGAAGTTCTCTTGTACTCTCTTATTTGCGCCAGTACTGCCAATGTCTGGGGACTTTAAGATCTCGAACCGTAACAGCACAAATCCACTGCTAGCATATATTGTTCTCTTTGGGTTTTTCCTTTCGGACTTTCCCTCAAGATTCTTAAAATGTGTCTGCTGGGGAGAGGTTTCCACACTCTTATAAGAAATGTTTCGTTCTCCTCTTCAACCGACGTGGGATCTCACAATCCATCCCCTTTGGGGGCCCAGCGTTCTCATTGGCATGCTGCTCGGTGTCTGGCTTTGATACCATTTGTAACAACCCAAGCCCACTCCTAGCAGATATTGTCCTCTTTCTAGGCTTTCTTTTTCGAGCTTCCTATGCGTCTGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGTTTCGTTCTCCTCTCCAACTGACGTGGGATCTCACACGACCTGAAGTTTTGGATCGTCATTGAAATTTTTTGGTAGAATGGGGAGGGGGGGTTGTTATAAAGGCGTGATTGATACTATTCTTCAACTTCATGGCCATCACTAAAGCCTCGACATAAATTTAGGATCTCTAGGTTGTTAATGTGCGAGATGATCTTCTAATACCTTCATTCTTATCATATTGGATGATATTTCAAGTAAATATGCGGTTTGGATATGGCCATGGATTACTCACTTGAGTCCATTGCATGATTCAATCACAAGCGTAGCCAGCTTTGTGGACCTTGTTACTTCAGCGCTGTCGTCCCCTTTCCTTTTTCCCAGCAAGTTGTACTCTCTGTCTTTAGTTTTTTTGCTTTCAATGAATAATTTAATTTTTATCTGAAAAGAAGTTTTTTACATGGGAGCATCTTTTCAAAAATTACCTCTGCAGTCAGTGATAGTAACAGTGGCACCCATTCACCCTGTATATAACTTCGTGTCTACTCCAAATTTTAAACATTTTTCTTCCTGATGTAATAGTAAACTTGATCATTCTCTTCAAACAGATACTGGATTCCACAGAGAAGGCCGTTGAGGATAGCTTAGCAACCACCGGTCGGGTCAATAAACGTGCCGTTCAGATTTACTCGGAGAGCTCAAAAACATCATGCTTCACTTGGTTGGCTATCTTCGTAATGACCTGTGTTTTCGTAATGGTTGTTCTTCTCATTCGAGTTACTTGA

mRNA sequence

ATGAAGAGAAAGAGTATCGGATTTGGGGAAGACGGCGGCGGAGGAGACGACGCGACCGGCAGCCGTACCCTCGCCTCCGATATATTTCTTCCGGCAGCCCCTTGGCGGGAAATTTTATTTCTTCTCGTCGTATCTCCCTTTCTGCTGCTGCCTCACGCCGACACGCCGATTTCTGTGTGTTTAGAGAGGATTCTTTTCCTCTTTTCTAAATGGAAGGATCAGGCTAAACTTATACACTATGTGACTACTCTAAGAGAACAGTTGGAGCAACTTGCAGAAGAGAAAACACCCGATGGTATATCAAGAGTTTCCAAGGCTTTGCTTGGTGATTATGCAGAGAAGATAGAGGCCATTGCTTCAAAATTAGCTGTTCCTTTGCCTGATGAGGAAGAGTCTTCTGAGCCCTCTACAAGTACTTCTGTTAAAGAATTTTCTTCTGTGACAGAAGGAGAAATAAACGCCCCCCATTCACCTCCGGGGCTAAGGAGGAGATTTCTGCCTTCTTCCTCTGTTGTGGAGGATAGATCTCATGGGACCATCAAAGAAGACTCGTCAGCACCTGTCAAGTTGGATGCTGCAGCAATATCCCACATCGAGAAACACAGGAAGCTTCAAGAGGACTTGACCGATGAAATGGTTGGGCTAGCGAGGCAATTGAAAGAGAGCAGTCTGATAATGAGCAAATCTTTGGAAAGCACTGAAAAGATACTGGATTCCACAGAGAAGGCCGTTGAGGATAGCTTAGCAACCACCGGTCGGGTCAATAAACGTGCCGTTCAGATTTACTCGGAGAGCTCAAAAACATCATGCTTCACTTGGTTGGCTATCTTCGTAATGACCTGTGTTTTCGTAATGGTTGTTCTTCTCATTCGAGTTACTTGA

Coding sequence (CDS)

ATGAAGAGAAAGAGTATCGGATTTGGGGAAGACGGCGGCGGAGGAGACGACGCGACCGGCAGCCGTACCCTCGCCTCCGATATATTTCTTCCGGCAGCCCCTTGGCGGGAAATTTTATTTCTTCTCGTCGTATCTCCCTTTCTGCTGCTGCCTCACGCCGACACGCCGATTTCTGTGTGTTTAGAGAGGATTCTTTTCCTCTTTTCTAAATGGAAGGATCAGGCTAAACTTATACACTATGTGACTACTCTAAGAGAACAGTTGGAGCAACTTGCAGAAGAGAAAACACCCGATGGTATATCAAGAGTTTCCAAGGCTTTGCTTGGTGATTATGCAGAGAAGATAGAGGCCATTGCTTCAAAATTAGCTGTTCCTTTGCCTGATGAGGAAGAGTCTTCTGAGCCCTCTACAAGTACTTCTGTTAAAGAATTTTCTTCTGTGACAGAAGGAGAAATAAACGCCCCCCATTCACCTCCGGGGCTAAGGAGGAGATTTCTGCCTTCTTCCTCTGTTGTGGAGGATAGATCTCATGGGACCATCAAAGAAGACTCGTCAGCACCTGTCAAGTTGGATGCTGCAGCAATATCCCACATCGAGAAACACAGGAAGCTTCAAGAGGACTTGACCGATGAAATGGTTGGGCTAGCGAGGCAATTGAAAGAGAGCAGTCTGATAATGAGCAAATCTTTGGAAAGCACTGAAAAGATACTGGATTCCACAGAGAAGGCCGTTGAGGATAGCTTAGCAACCACCGGTCGGGTCAATAAACGTGCCGTTCAGATTTACTCGGAGAGCTCAAAAACATCATGCTTCACTTGGTTGGCTATCTTCGTAATGACCTGTGTTTTCGTAATGGTTGTTCTTCTCATTCGAGTTACTTGA

Protein sequence

MKRKSIGFGEDGGGGDDATGSRTLASDIFLPAAPWREILFLLVVSPFLLLPHADTPISVCLERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT

Homology

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BLAST of Csor.00g217960 vs. NCBI nr
Match: KAG6589676.1 (hypothetical protein SDJN03_15099, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 549 bits (1414), Expect = 2.37e-196
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MKRKSIGFGEDGGGGDDATGSRTLASDIFLPAAPWREILFLLVVSPFLLLPHADTPISVC 60
           MKRKSIGFGEDGGGGDDATGSRTLASDIFLPAAPWREILFLLVVSPFLLLPHADTPISVC
Sbjct: 1   MKRKSIGFGEDGGGGDDATGSRTLASDIFLPAAPWREILFLLVVSPFLLLPHADTPISVC 60

Query: 61  LERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEAIAS 120
           LERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEAIAS
Sbjct: 61  LERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEAIAS 120

Query: 121 KLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTI 180
           KLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTI
Sbjct: 121 KLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTI 180

Query: 181 KEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDST 240
           KEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDST
Sbjct: 181 KEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDST 240

Query: 241 EKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           EKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Sbjct: 241 EKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293

[Close]

BLAST of Csor.00g217960 vs. NCBI nr
Match: KAG7023356.1 (hypothetical protein SDJN02_14381, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 412 bits (1058), Expect = 6.13e-143
Identity = 233/275 (84.73%), Postives = 234/275 (85.09%), Query Frame = 0


Query: 19  TGSRTLASDIFLPAAPWREILFLLVVSPFLLLPHADTPISVCLERILFLFSKWKDQAKLI 78
           TGSRT ASDIFLPAAPWREILF+LVVSPFLL PHADTPISVCLER               
Sbjct: 6   TGSRTRASDIFLPAAPWREILFVLVVSPFLLPPHADTPISVCLER--------------- 65

Query: 79  HYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTS 138
                                   VSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTS
Sbjct: 66  ------------------------VSKALLGDYAEKIEAIASKLAVPLPDEEESSEPSTS 125

Query: 139 TSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHI 198
           TSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHI
Sbjct: 126 TSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKEDSSAPVKLDAAAISHI 185

Query: 199 EKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRA 258
           EKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRA
Sbjct: 186 EKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEKAVEDSLATTGRVNKRA 241

Query: 259 VQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           VQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Sbjct: 246 VQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 241

[Close]

BLAST of Csor.00g217960 vs. NCBI nr
Match: XP_022987340.1 (uncharacterized protein LOC111484922 isoform X1 [Cucurbita maxima])

HSP 1 Score: 410 bits (1053), Expect = 3.67e-142
Identity = 224/236 (94.92%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 58  SVCLERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 117
            + L+R+L      KDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA
Sbjct: 7   EINLKRLLATALHQKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 66

Query: 118 IASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSH 177
           IASKLAVPLPDEEESSEPSTSTSVKEFSSV EGEINAPHSPPGLRRRFLPSSSVVEDRSH
Sbjct: 67  IASKLAVPLPDEEESSEPSTSTSVKEFSSVAEGEINAPHSPPGLRRRFLPSSSVVEDRSH 126

Query: 178 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 237
           GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL
Sbjct: 127 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 186

Query: 238 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Sbjct: 187 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 242

[Close]

BLAST of Csor.00g217960 vs. NCBI nr
Match: XP_022921329.1 (uncharacterized protein LOC111429634 isoform X1 [Cucurbita moschata])

HSP 1 Score: 409 bits (1051), Expect = 7.39e-142
Identity = 223/236 (94.49%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 58  SVCLERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 117
            + L+R+L      KDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA
Sbjct: 7   EINLKRLLATAPHQKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 66

Query: 118 IASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSH 177
           IASKLAVPLPDEEESSEPSTSTSVKEFSSV EG+INAPHSPPGLRRRFLPSSSVVEDRSH
Sbjct: 67  IASKLAVPLPDEEESSEPSTSTSVKEFSSVAEGDINAPHSPPGLRRRFLPSSSVVEDRSH 126

Query: 178 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 237
           GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL
Sbjct: 127 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 186

Query: 238 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Sbjct: 187 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 242

[Close]

BLAST of Csor.00g217960 vs. NCBI nr
Match: XP_023515489.1 (uncharacterized protein LOC111779632 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409 bits (1050), Expect = 1.05e-141
Identity = 223/236 (94.49%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 58  SVCLERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 117
            + L+R+L      KDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA
Sbjct: 7   EINLKRLLATAPHQKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 66

Query: 118 IASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSH 177
           IASKLAVPLPDEEESSEPSTSTSVKEFSSV +GEINAPHSPPGLRRRFLPSSSVVEDRSH
Sbjct: 67  IASKLAVPLPDEEESSEPSTSTSVKEFSSVAKGEINAPHSPPGLRRRFLPSSSVVEDRSH 126

Query: 178 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 237
           GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL
Sbjct: 127 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 186

Query: 238 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Sbjct: 187 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 242

[Close]

BLAST of Csor.00g217960 vs. ExPASy TrEMBL
Match: A0A6J1JGJ9 (uncharacterized protein LOC111484922 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484922 PE=3 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 1.78e-142
Identity = 224/236 (94.92%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 58  SVCLERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 117
            + L+R+L      KDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA
Sbjct: 7   EINLKRLLATALHQKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 66

Query: 118 IASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSH 177
           IASKLAVPLPDEEESSEPSTSTSVKEFSSV EGEINAPHSPPGLRRRFLPSSSVVEDRSH
Sbjct: 67  IASKLAVPLPDEEESSEPSTSTSVKEFSSVAEGEINAPHSPPGLRRRFLPSSSVVEDRSH 126

Query: 178 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 237
           GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL
Sbjct: 127 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 186

Query: 238 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Sbjct: 187 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 242

[Close]

BLAST of Csor.00g217960 vs. ExPASy TrEMBL
Match: A0A6J1E043 (uncharacterized protein LOC111429634 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429634 PE=3 SV=1)

HSP 1 Score: 409 bits (1051), Expect = 3.58e-142
Identity = 223/236 (94.49%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 58  SVCLERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 117
            + L+R+L      KDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA
Sbjct: 7   EINLKRLLATAPHQKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 66

Query: 118 IASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSH 177
           IASKLAVPLPDEEESSEPSTSTSVKEFSSV EG+INAPHSPPGLRRRFLPSSSVVEDRSH
Sbjct: 67  IASKLAVPLPDEEESSEPSTSTSVKEFSSVAEGDINAPHSPPGLRRRFLPSSSVVEDRSH 126

Query: 178 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 237
           GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL
Sbjct: 127 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 186

Query: 238 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT
Sbjct: 187 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 242

[Close]

BLAST of Csor.00g217960 vs. ExPASy TrEMBL
Match: A0A1S3AWP3 (uncharacterized protein LOC103483591 OS=Cucumis melo OX=3656 GN=LOC103483591 PE=3 SV=1)

HSP 1 Score: 374 bits (959), Expect = 3.47e-128
Identity = 203/236 (86.02%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 58  SVCLERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 117
            + L+R+L      KDQAKLIHYVTTLREQLEQLAEEKTP+G+SRVSKALLGDY+EKIEA
Sbjct: 7   EINLKRLLATAPHQKDQAKLIHYVTTLREQLEQLAEEKTPEGLSRVSKALLGDYSEKIEA 66

Query: 118 IASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSH 177
           IASKL VPLPD EESSEPSTSTSV+E SSV EG++N P SP GLRRRF P+SS VEDRSH
Sbjct: 67  IASKLIVPLPDVEESSEPSTSTSVREISSVAEGDLNTPSSPTGLRRRF-PASSTVEDRSH 126

Query: 178 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 237
           GTIKEDSSAPVKLDAAAI+HIEKHRKLQEDLTDEMVGLA+QLKESSLIMSKSLE+TEKIL
Sbjct: 127 GTIKEDSSAPVKLDAAAINHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKIL 186

Query: 238 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIF MTC+F+MVVLLIRVT
Sbjct: 187 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFAMTCIFIMVVLLIRVT 241

[Close]

BLAST of Csor.00g217960 vs. ExPASy TrEMBL
Match: A0A5A7U6J9 (Cation exchanger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001610 PE=3 SV=1)

HSP 1 Score: 374 bits (959), Expect = 3.47e-128
Identity = 203/236 (86.02%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 58  SVCLERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 117
            + L+R+L      KDQAKLIHYVTTLREQLEQLAEEKTP+G+SRVSKALLGDY+EKIEA
Sbjct: 7   EINLKRLLATAPHQKDQAKLIHYVTTLREQLEQLAEEKTPEGLSRVSKALLGDYSEKIEA 66

Query: 118 IASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSH 177
           IASKL VPLPD EESSEPSTSTSV+E SSV EG++N P SP GLRRRF P+SS VEDRSH
Sbjct: 67  IASKLIVPLPDVEESSEPSTSTSVREISSVAEGDLNTPSSPTGLRRRF-PASSTVEDRSH 126

Query: 178 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 237
           GTIKEDSSAPVKLDAAAI+HIEKHRKLQEDLTDEMVGLA+QLKESSLIMSKSLE+TEKIL
Sbjct: 127 GTIKEDSSAPVKLDAAAINHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKIL 186

Query: 238 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIF MTC+F+MVVLLIRVT
Sbjct: 187 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFAMTCIFIMVVLLIRVT 241

[Close]

BLAST of Csor.00g217960 vs. ExPASy TrEMBL
Match: A0A6J1C2Z7 (uncharacterized protein LOC111007470 OS=Momordica charantia OX=3673 GN=LOC111007470 PE=3 SV=1)

HSP 1 Score: 371 bits (953), Expect = 2.74e-127
Identity = 206/236 (87.29%), Postives = 219/236 (92.80%), Query Frame = 0


Query: 58  SVCLERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEA 117
            + L+R+L    + KDQAKLIHYVTTLREQLEQLAEEKTP+G+SRVSKALLGDY+EKIEA
Sbjct: 7   EINLKRLLATAPRQKDQAKLIHYVTTLREQLEQLAEEKTPEGLSRVSKALLGDYSEKIEA 66

Query: 118 IASKLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSH 177
           IASKLAVPLPD EESSEPSTS SV+EFSSV EGE+N   S PGLRRRF PSS VV+DRSH
Sbjct: 67  IASKLAVPLPDVEESSEPSTSASVREFSSVVEGEVNT-LSSPGLRRRFQPSS-VVDDRSH 126

Query: 178 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKIL 237
           GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLA+QLKESSLIMSKSLE+TEKIL
Sbjct: 127 GTIKEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLAKQLKESSLIMSKSLENTEKIL 186

Query: 238 DSTEKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 293
           DSTEKAVEDSLATTGRVNKRAV+IYSESSKTSCFTWLAIF MTCVFVMVVLLIRVT
Sbjct: 187 DSTEKAVEDSLATTGRVNKRAVEIYSESSKTSCFTWLAIFAMTCVFVMVVLLIRVT 240

[Close]

BLAST of Csor.00g217960 vs. TAIR 10
Match: AT3G55600.1 (Membrane fusion protein Use1 )

HSP 1 Score: 236.1 bits (601), Expect = 3.6e-62
Identity = 138/233 (59.23%), Postives = 172/233 (73.82%), Query Frame = 0


Query: 61  LERILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEAIAS 120
           L R+L      ++Q+KL+HYV TLREQLEQL+EEKTP+G+ RV+KA + +Y EKIEA+AS
Sbjct: 11  LRRLLSAAPNQQNQSKLMHYVATLREQLEQLSEEKTPEGLPRVTKAKVNEYYEKIEAVAS 70

Query: 121 KLAVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTI 180
           K+A   P+ E S EP    S    S   E E  +P SP  LRRR +P+SS  +++S    
Sbjct: 71  KIASQEPETEVSDEPFAKDSTSGSSPKIEDEPRSPTSPQ-LRRRIVPASS--KEQSFDAA 130

Query: 181 KEDSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDST 240
             DSS P+KLD AA +HI+KHRKLQEDLTDEMV LARQLKE S  +S+S+++TEKILDST
Sbjct: 131 DADSSKPIKLDTAAQAHIDKHRKLQEDLTDEMVVLARQLKERSQAISQSVQNTEKILDST 190

Query: 241 EKAVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 294
           E+A+E SLA+TG    RA +IYS+SSKTSCF WL IF M CVF+MVVLLIRVT
Sbjct: 191 EEAIEQSLASTGHATTRATKIYSQSSKTSCFQWLLIFAMICVFIMVVLLIRVT 240

[Close]

BLAST of Csor.00g217960 vs. TAIR 10
Match: AT1G54110.1 (Membrane fusion protein Use1 )

HSP 1 Score: 213.8 bits (543), Expect = 1.9e-55
Identity = 126/231 (54.55%), Postives = 165/231 (71.43%), Query Frame = 0


Query: 63  RILFLFSKWKDQAKLIHYVTTLREQLEQLAEEKTPDGISRVSKALLGDYAEKIEAIASKL 122
           R+L      ++Q+KL+HYV TLREQLEQL+EEKT +G+ RV+ A + +Y EKIEA+ S++
Sbjct: 12  RLLSAAPNQQNQSKLMHYVATLREQLEQLSEEKTLEGLPRVTNAKVNEYYEKIEAVVSRI 71

Query: 123 AVPLPDEEESSEPSTSTSVKEFSSVTEGEINAPHSPPGLRRRFLPSSSVVEDRSHGTIKE 182
              +P  E S E     S  + S   E +   P+SP  LRRR +P+SS  +++S+     
Sbjct: 72  VAQVPHTEVSDEAFAKDSTNDSSPKVEDDTRTPNSPQ-LRRRIVPASS--KEQSYDA--- 131

Query: 183 DSSAPVKLDAAAISHIEKHRKLQEDLTDEMVGLARQLKESSLIMSKSLESTEKILDSTEK 242
           D S P+KLD AA + + K RKLQEDLTDEMV LARQLKE S ++S+S+++TEKILDSTE+
Sbjct: 132 DPSKPIKLDTAAQAQVNKQRKLQEDLTDEMVVLARQLKERSQMISQSVQNTEKILDSTEE 191

Query: 243 AVEDSLATTGRVNKRAVQIYSESSKTSCFTWLAIFVMTCVFVMVVLLIRVT 294
           A+E SLA+TG    RA +IYSESSKTSCF WL I  MTCVF+MVV+LIRVT
Sbjct: 192 AIEQSLASTGHATVRATKIYSESSKTSCFQWLLILAMTCVFIMVVMLIRVT 236

The following BLAST results are available for this feature:

BLAST of Csor.00g217960 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g217960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589676.1	2.37e-196	100.00	hypothetical protein SDJN03_15099, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023356.1	6.13e-143	84.73	hypothetical protein SDJN02_14381, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022987340.1	3.67e-142	94.92	uncharacterized protein LOC111484922 isoform X1 [Cucurbita maxima]	[more]
XP_022921329.1	7.39e-142	94.49	uncharacterized protein LOC111429634 isoform X1 [Cucurbita moschata]	[more]
XP_023515489.1	1.05e-141	94.49	uncharacterized protein LOC111779632 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g217960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JGJ9	1.78e-142	94.92	uncharacterized protein LOC111484922 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E043	3.58e-142	94.49	uncharacterized protein LOC111429634 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3AWP3	3.47e-128	86.02	uncharacterized protein LOC103483591 OS=Cucumis melo OX=3656 GN=LOC103483591 PE=...	[more]
A0A5A7U6J9	3.47e-128	86.02	Cation exchanger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1C2Z7	2.74e-127	87.29	uncharacterized protein LOC111007470 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Csor.00g217960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55600.1	3.6e-62	59.23	Membrane fusion protein Use1	[more]
AT1G54110.1	1.9e-55	54.55	Membrane fusion protein Use1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..164
None	No IPR available	PANTHER	PTHR13050:SF9	VESICLE TRANSPORT PROTEIN, USE1-RELATED	coord: 59..293
None	No IPR available	CDD	cd15860	SNARE_USE1	coord: 201..257 e-value: 2.16924E-15 score: 67.2044
IPR019150	Vesicle transport protein, Use1	PFAM	PF09753	Use1	coord: 73..293 e-value: 1.8E-51 score: 175.3
IPR019150	Vesicle transport protein, Use1	PANTHER	PTHR13050	USE1-LIKE PROTEIN	coord: 59..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g217960.m01	Csor.00g217960.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane