Csor.00g217070 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g217070
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr10: 2196030 .. 2196374 (+)
RNA-Seq ExpressionCsor.00g217070
SyntenyCsor.00g217070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCAACGAAGCTTATTACAAGAACCAAGAAAATCTTGATTTTCCGGGAAAATGTTTCTGAAAGGAAAATTCCCTGTAGTCTGAATCTATGCGATTACACATTATACCTCGATTCTCGGATTCTCGGATCCTCGGATTCGATTTTCCCTGTTCCAATAGCCCTAATTTCTCTCTCACCATGTTGTCTGGCTTATCATGGCGATGATTCGAGTTCTTTCACCGGAGTACTCCGCCGGAATATCCTTCATCCATCGGAGCATCGGTGGGCGGATAAACACACCGGATCCTCTTCGGCCATGAAGATCAGTATCAAAAGAAGGTTTACAGATGGTTCCCAGTAG

mRNA sequence

ATGAACTCAACGAAGCTTATTACAAGAACCAAGAAAATCTTGATTTTCCGGGAAAATGTTTCTGAAAGGAAAATTCCCTGTAGTCTGAATCTATGCGATTACACATTATACCTCGATTCTCGGATTCTCGGATCCTCGGATTCGATTTTCCCTGTTCCAATAGCCCTAATTTCTCTCTCACCATGTTGTCTGGCTTATCATGGCGATGATTCGAGTTCTTTCACCGGAGTACTCCGCCGGAATATCCTTCATCCATCGGAGCATCGGTGGGCGGATAAACACACCGGATCCTCTTCGGCCATGAAGATCAGTATCAAAAGAAGGTTTACAGATGGTTCCCAGTAG

Coding sequence (CDS)

ATGAACTCAACGAAGCTTATTACAAGAACCAAGAAAATCTTGATTTTCCGGGAAAATGTTTCTGAAAGGAAAATTCCCTGTAGTCTGAATCTATGCGATTACACATTATACCTCGATTCTCGGATTCTCGGATCCTCGGATTCGATTTTCCCTGTTCCAATAGCCCTAATTTCTCTCTCACCATGTTGTCTGGCTTATCATGGCGATGATTCGAGTTCTTTCACCGGAGTACTCCGCCGGAATATCCTTCATCCATCGGAGCATCGGTGGGCGGATAAACACACCGGATCCTCTTCGGCCATGAAGATCAGTATCAAAAGAAGGTTTACAGATGGTTCCCAGTAG

Protein sequence

MNSTKLITRTKKILIFRENVSERKIPCSLNLCDYTLYLDSRILGSSDSIFPVPIALISLSPCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSAMKISIKRRFTDGSQ
Homology
[Close]
BLAST of Csor.00g217070 vs. NCBI nr
Match: KAG6589765.1 (hypothetical protein SDJN03_15188, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023436.1 hypothetical protein SDJN02_14461, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 234 bits (597), Expect = 1.06e-77
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MNSTKLITRTKKILIFRENVSERKIPCSLNLCDYTLYLDSRILGSSDSIFPVPIALISLS 60
           MNSTKLITRTKKILIFRENVSERKIPCSLNLCDYTLYLDSRILGSSDSIFPVPIALISLS
Sbjct: 1   MNSTKLITRTKKILIFRENVSERKIPCSLNLCDYTLYLDSRILGSSDSIFPVPIALISLS 60

Query: 61  PCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSAMKISIKRRFTDGSQ 114
           PCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSAMKISIKRRFTDGSQ
Sbjct: 61  PCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSAMKISIKRRFTDGSQ 114

[Close]
BLAST of Csor.00g217070 vs. NCBI nr
Match: KAG6587814.1 (hypothetical protein SDJN03_16379, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 57.4 bits (137), Expect = 7.46e-08
Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 0 

Query: 49  IFPVP-IALISLS---PCCLAYHGDDSSSFTGVLRRNILHPSEHRWADKHTGSSSAMKIS 107
           +FP+  I L+ LS   P   A +  D  S TG+L RN+LHP EH+  DK TGSS A KIS
Sbjct: 7   LFPITLICLLLLSESFPVSSADYDQDWKSLTGILHRNVLHPLEHQRLDKDTGSSLAEKIS 66

The following BLAST results are available for this feature:
BLAST of Csor.00g217070 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g217070 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589765.11.06e-77100.00hypothetical protein SDJN03_15188, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6587814.17.46e-0852.38hypothetical protein SDJN03_16379, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g217070 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g217070 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g217070.m01Csor.00g217070.m01mRNA