Csor.00g216080 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g216080
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	Csor_Chr10: 2709039 .. 2709425 (-)
RNA-Seq Expression	Csor.00g216080
Synteny	Csor.00g216080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAATTTCAAGAAAAGAGAAGCATGTCATCGTTGCAGTTACCCCAAGTATGGAGGCCCAGACCCTTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCACTGCCGTCAGCTGCGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGGTTTGCCCTAGGTACATACACAACAATAAACTATACAATAAAAGTTTATCAAAACAGTAA

mRNA sequence

ATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAATTTCAAGAAAAGAGAAGCATGTCATCGTTGCAGTTACCCCAAGTATGGAGGCCCAGACCCTTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCACTGCCGTCAGCTGCGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGGTTTGCCCTAGGTACATACACAACAATAAACTATACAATAAAAGTTTATCAAAACAGTAA

Coding sequence (CDS)

ATGAGCTGGTCAGCAGGAGACTGGATATGCAACGTTTGCCAGAACGTAAATTTCAAGAAAAGAGAAGCATGTCATCGTTGCAGTTACCCCAAGTATGGAGGCCCAGACCCTTCAACTTACAGTTACAACAAGACGGAGGTGTTGGCCGGAGACTGGTACTGCACTGCCGTCAGCTGCGGAGCTCACAATTACGCCAGCCGCCCGAACTGCTTTAGATGTGGTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCGCCTACATGATGGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGGTTTGCCCTAGGTACATACACAACAATAAACTATACAATAAAAGTTTATCAAAACAGTAA

Protein sequence

MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRYIHNNKLYNKSLSKQ

Homology

[Close]

BLAST of Csor.00g216080 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-05
Identity = 40/158 (25.32%), Postives = 54/158 (34.18%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRCSYP---------------------------------KY 65
           GDW C +C   NF++R +C RCS+P                                  Y
Sbjct: 345 GDWNCPMCGFSNFQRRTSCFRCSFPGPTHVSAATGSNTFSPDFPYGNSYGNGSSHFIANY 404

Query: 66  GGP------------------------DPSTYSY-NKTEVLAGDWYCTAVSCGAHNYASR 103
           GG                           S+ S+       AGDW C +  CG HN+A  
Sbjct: 405 GGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFGGNVPFRAGDWKCGSEGCGYHNFAKN 464

[Close]

BLAST of Csor.00g216080 vs. NCBI nr
Match: KAG6589864.1 (hypothetical protein SDJN03_15287, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 296 bits (758), Expect = 8.21e-102
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRYIHNNKL 120
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRYIHNNKL
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRYIHNNKL 120

Query: 121 YNKSLSKQ 128
           YNKSLSKQ
Sbjct: 121 YNKSLSKQ 128

[Close]

BLAST of Csor.00g216080 vs. NCBI nr
Match: XP_022961068.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata] >XP_022961069.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata] >XP_022987897.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima] >XP_022987898.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 266 bits (679), Expect = 1.39e-89
Identity = 116/120 (96.67%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRY---IHN 117
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPR    IHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN 120

[Close]

BLAST of Csor.00g216080 vs. NCBI nr
Match: XP_023516205.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023516206.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265 bits (676), Expect = 4.00e-89
Identity = 115/120 (95.83%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAV+CG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVNCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRY---IHN 117
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPR    IHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN 120

[Close]

BLAST of Csor.00g216080 vs. NCBI nr
Match: XP_004150016.3 (zinc finger Ran-binding domain-containing protein 2 isoform X2 [Cucumis sativus] >KAA0046754.1 zinc finger Ran-binding domain-containing protein 2-like isoform X3 [Cucumis melo var. makuwa] >TYK29693.1 zinc finger Ran-binding domain-containing protein 2-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 260 bits (665), Expect = 1.90e-87
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT VSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRY---IHN 117
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR    +HN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

[Close]

BLAST of Csor.00g216080 vs. NCBI nr
Match: XP_011656267.2 (zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus] >XP_011656275.1 zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 260 bits (665), Expect = 1.97e-87
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT VSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRY---IHN 117
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR    +HN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

[Close]

BLAST of Csor.00g216080 vs. ExPASy TrEMBL
Match: A0A6J1JBM0 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485301 PE=4 SV=1)

HSP 1 Score: 266 bits (679), Expect = 6.75e-90
Identity = 116/120 (96.67%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRY---IHN 117
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPR    IHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN 120

[Close]

BLAST of Csor.00g216080 vs. ExPASy TrEMBL
Match: A0A6J1HCX6 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461687 PE=4 SV=1)

HSP 1 Score: 266 bits (679), Expect = 6.75e-90
Identity = 116/120 (96.67%), Postives = 116/120 (96.67%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRY---IHN 117
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPR    IHN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRIGCGIHN 120

[Close]

BLAST of Csor.00g216080 vs. ExPASy TrEMBL
Match: A0A5D3E0T0 (Zinc finger Ran-binding domain-containing protein 2-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00450 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 9.22e-88
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT VSCG
Sbjct: 1   MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRY---IHN 117
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR    +HN
Sbjct: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 120

[Close]

BLAST of Csor.00g216080 vs. ExPASy TrEMBL
Match: A0A0A0LWE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 9.53e-87
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT VSCG
Sbjct: 70  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 129

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRY---IHN 117
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR    +HN
Sbjct: 130 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 189

[Close]

BLAST of Csor.00g216080 vs. ExPASy TrEMBL
Match: A0A1S3CPF6 (uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502740 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 9.53e-87
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTE LAGDWYCT VSCG
Sbjct: 69  MSWSAGDWICNVCQNVNFKKREACHRCGYPKYGGPDPSTYSYNKTEALAGDWYCTTVSCG 128

Query: 61  AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWVCPRY---IHN 117
           AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDW+CPR    +HN
Sbjct: 129 AHNYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHN 188

[Close]

BLAST of Csor.00g216080 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 2.8e-43
Identity = 74/122 (60.66%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 1   MSWSAGDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCG 60
           MSW+ GDW+C  CQ+ NFKKRE+C +C YPK+GG D STY YN+TEV+AGDWYC A++CG
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 61  AHNYASRPNCFRCGAFKSVYPGD-YGAYMMGSDQYGSD-ASIPPGWKSGDWVCPRY---I 118
           +HNYASR +C+RCG  K  Y    YGA M+    YG+D A+ PPGWK+GDWVCPR    +
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVA---YGNDGAACPPGWKTGDWVCPRVGCGV 119

[Close]

BLAST of Csor.00g216080 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 47/137 (34.31%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRCSYPKYGG------------PDPSTYSYNK-TEVLAGDW 65
           GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +V  GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 66  YCTAVSCGAHNYASRPNCFRCGAFKSVYPGD----------------YGAYMMGSDQYGS 114
           YC    CG HN+A+R +CF+CGA K  +                    G +  G    G 
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

[Close]

BLAST of Csor.00g216080 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 6.6e-21
Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRC-------------SYPKYGGPDPSTYSYNK-TEVLAGD 65
           GDW C  C ++NF++R++C RC              +  +GG   S + +   ++V  GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 66  WYCTAVSCGAHNYASRPNCFRCGAFK-SVYPGDYGAYMMGSDQYGSD--ASIPPG----- 114
           WYCT  +CG HN+ASR  CF+CG FK     G  G  + G   + +D   S  PG     
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

[Close]

BLAST of Csor.00g216080 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 71.6 bits (174), Expect = 5.1e-13
Identity = 44/136 (32.35%), Postives = 58/136 (42.65%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRCSYPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNYA 65
           GDW C  C+N N+  R  C+RC  P+    D +T   +K     GDW CT   C  +NYA
Sbjct: 7   GDWECLGCRNRNYAFRSFCNRCKQPRL-IMDNNTSPNSKWLPRIGDWICT--GCTNNNYA 66

Query: 66  SRPNCFRCGAFKSV-------YPG-----------------DYGAYMMGSDQYGSDASIP 118
           SR  C +CG  K V        PG                 D    ++      + AS+ 
Sbjct: 67  SREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGSLLAFSNATNQASVH 126

[Close]

BLAST of Csor.00g216080 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.3e-04
Identity = 22/83 (26.51%), Postives = 35/83 (42.17%), Query Frame = 0


Query: 6   GDWICNVCQNVNFKKREACHRCS-YPKYGGPDPSTYSYNKTEVLAGDWYCTAVSCGAHNY 65
           GDW C  C+ +NF K   C RC  + +           +   +  GDW C   +C   N+
Sbjct: 236 GDWYCTECKFLNFAKNIRCLRCDVFSEERLKQLKEEQKDHLPLKKGDWICQ--TCNFLNF 295

Query: 66  ASRPNCFRC---GAFKSVYPGDY 85
           +    C RC      + + PG++
Sbjct: 296 SKNTRCLRCKDKPTLRQINPGEW 316

The following BLAST results are available for this feature:

BLAST of Csor.00g216080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	1.3e-05	25.32	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of Csor.00g216080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589864.1	8.21e-102	100.00	hypothetical protein SDJN03_15287, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022961068.1	1.39e-89	96.67	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata] >X...	[more]
XP_023516205.1	4.00e-89	95.83	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. ...	[more]
XP_004150016.3	1.90e-87	92.50	zinc finger Ran-binding domain-containing protein 2 isoform X2 [Cucumis sativus]...	[more]
XP_011656267.2	1.97e-87	92.50	zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus]...	[more]

BLAST of Csor.00g216080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBM0	6.75e-90	96.67	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=...	[more]
A0A6J1HCX6	6.75e-90	96.67	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata O...	[more]
A0A5D3E0T0	9.22e-88	92.50	Zinc finger Ran-binding domain-containing protein 2-like isoform X3 OS=Cucumis m...	[more]
A0A0A0LWE1	9.53e-87	92.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G306810 PE=4 SV=1	[more]
A0A1S3CPF6	9.53e-87	92.50	uncharacterized protein LOC103502740 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Csor.00g216080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	2.8e-43	60.66	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	1.3e-21	34.31	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	6.6e-21	37.40	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	5.1e-13	32.35	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	3.3e-04	26.51	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 6..30 e-value: 1.6E-5 score: 34.4 coord: 50..76 e-value: 5.3E-5 score: 32.6
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 49..77 e-value: 5.9E-7 score: 28.7 coord: 4..32 e-value: 6.2E-7 score: 28.6
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 8..27
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 52..73
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 4..33 score: 9.133901
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 48..79 score: 9.145193
None	No IPR available	GENE3D	4.10.1060.10		coord: 39..79 e-value: 3.1E-11 score: 44.3 coord: 1..35 e-value: 6.3E-11 score: 43.4
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 1..118
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 1..118
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 43..78
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 2..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g216080.m01	Csor.00g216080.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding