Csor.00g215650 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g215650
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Coiled-coil domain-containing protein 9-like
Location	Csor_Chr10: 2933505 .. 2936016 (-)
RNA-Seq Expression	Csor.00g215650
Synteny	Csor.00g215650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGATATGCCTGCTCAGCTCTAAAACCCTAGTCTTACCGTCGGCGGCTTATCTACCAATGTCCTCTTCATCTTCTACTAGCCATAGTTGCTGTTTTGGCGGCTGCAGATTCTCTTTCCCAAGCAAGCCCATTTCGACTTCTAATTTGATTGTTGTTAGAAGGAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTCGCAATCCACTCGATTTCCCAATTGTATCTTTCTCACCCTTTCCTTGCGTGTTTGATGTTTTCGGTTTGTAATGGAGCTCTTTTTCGTAGGATTTTAATGTTTTTGCTTCCCGTTCATGGAGATTATGCTTACCCTTTTTATGTAGCTTAGCTAGTATATTTGCTGGATTAAGTTGGGTGGATAATTGGAGCGTTTCCTAGGATTTGATATAATTATTGTTAAATTTTGTCTCTGAAGGTTGTTTAAAATGCTTGTTCATGAGTTATCTTGCCAGGTTCTTCCTGCAACTGTACCTGTCTGCTTGTTTTGGCTATGTCTGCATTTTCCATGGAAAGTATCCATCCCTTGAGCTCAATTGAAAATGGGCGATTTCTATCTTTGGACGAGGGGCACCAACCATTATAATGTTTACTTATTTGCATTGTCACAGATTTCATGAGAATGGGCCATAATTTGTTGCCTGGATATTTTGACTTCATATTTGTGATAGTTCTTGTATATTGTATTGCACTGTGTAAATGCTTATTGCACTGTAGTTGTTGAACTGAGATTGAAAGAAGATATTGGCAGTCCTCACGATTGTTTGTCGCGCAATTTAATAGTTATATTGATACTTCACCATTTCAGTTTTGGGGGTGTTTTGTTTGTTCAATTTGTTTTCTGTTCTTCTGCCGGGTTTCTACTTGATGATTTTGGAAAATCAACTGACATCATCAGGTTGTTCATAAATTTATCTTGAATCATTTTTGTAAGGGCGCATTTTTTGGTGGTCAATTCGTTTTCTAATTTGAAATTGCTGATGTTCTTACCTGACAAACGAAGTTTGGTTAGTAACTAGTTAGAAAAGTCTATGAAGTGCTTGAGTAGGCTATAGCTGGTGTTCTTTACATTGAATGCTTCTTGACTATTTGGTTGCAGGAGTGGGAGAGGCCAAAGCCAGGGCGTAGGCCAGACATTTTTCCTCAGTTTAGCCCCATGAAAACACCATTGCCACCACCATTGCCGTGTGATCCCCCTGAAGAGGATGAGGAGGAGGAAGAGAAAAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCCGAGAAGCAGTAGATGATTTTGAAGAACTCCTTGAGTTTTTTGCCCCTTTTCCATCTTCACTTTGTTTTTTTGATAGGCTGAAAGCAATAGATATCCCCAGGGGACGATGAGCTGAGATAGTCAACTATGAACCAAACATGTTTGACTGCTACTACTGATATTGCAATTCTATATTAAATTAAAAATCTTTTTAGGATTTCCCATTCTCTGGAGTTTCAACCCCTACTTTAGGCAGTTCATTTTACGAATAATTATCATGAATGATATGCCTTCTCACCCGTTTCCTGTCACAATGTTAGTATGTTTCAACTGTTATATTTGAGTTTTGTTTCAGAGCAAATTTCTAGAAGCTGCCGCAGGCCAGCACAGGGCGCTTCACATTATTATATGACAAATCCCAGAACGATTTGTTGTAATTGGTTTCTTTTCTTTTCTATTTATATATTATTACTAATATTGAATGCGACTCCTTGTTGTTTTTCCAAGAACGTGACTGAATGCAATTATTAATTATTAGTGAAAAGCCTTTCCCCTTCTTACGAGCCCGTCGTTATTAGCTATGGCTAAATGACAGATGATTGTGTAATTCAGAGTAAGTATAAATTTGTCTGGTGCATGCTTGTGGTTGGATTTATGTAGCCTTTGACTTTATAGATACCCACTTTCTATTTAGTATATAGTGGCTCTCACTTTGCAGGATTCATAATAGAAGTACTTGAAAATTCCCATCTTTAAAAATTCGTTGGCTGCAAACTAACTTCTTGGATACAAGTCAAACTTGCATTCTTTGCCAGAAATATTGAAAGTGCGCAGGTCCCAGTGGCAGCAGTTGATGATTTGCAGCTTTTCTCTTCTTTGAAGAATCATCCATCCACAGGGCATCTGCTTTGGCTTCCTCTCTTATTCAAACTCATGGTATGTACTATCAACTTCAATTAGCCAGTTTTTTCATCTTTCTTGATTCTTCAGTTTCTTTTCTTTTCTTTGTTTGATAGCAACACGTAGGTATCTGATATTCAATACTTGGGTTAGTTTCCTTATATCCTCGGCTGTCAGGTTTTGAACAATGAACCTTCTCTTTTTCCCTTCTTGGTCGCAGAATCTTACTCCCACTCTGTTCAGGTCACTGGTAAGGCTGCTACTATCTCTAATTGTCCAGCCTGCAGCCTCTGTCTCAACCTTGCTTTTTTACAGTGA

mRNA sequence

ATGGCGTCGATATGCCTGCTCAGCTCTAAAACCCTAGTCTTACCGTCGGCGGCTTATCTACCAATGTCCTCTTCATCTTCTACTAGCCATAGTTGCTGTTTTGGCGGCTGCAGATTCTCTTTCCCAAGCAAGCCCATTTCGACTTCTAATTTGATTGTTGTTAGAAGGAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTCGCAATCCACTCGATTTCCCAATTGAGTGGGAGAGGCCAAAGCCAGGGCGTAGGCCAGACATTTTTCCTCAGTTTAGCCCCATGAAAACACCATTGCCACCACCATTGCCGTGTGATCCCCCTGAAGAGGATGAGGAGGAGGAAGAGAAAAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCCGAGAAGCAAAATATTGAAAGTGCGCAGGTCCCAGTGGCAGCAGTTGATGATTTGCAGCTTTTCTCTTCTTTGAAGAATCATCCATCCACAGGGCATCTGCTTTGGCTTCCTCTCTTATTCAAACTCATGAATCTTACTCCCACTCTGTTCAGGTCACTGTGA

Coding sequence (CDS)

ATGGCGTCGATATGCCTGCTCAGCTCTAAAACCCTAGTCTTACCGTCGGCGGCTTATCTACCAATGTCCTCTTCATCTTCTACTAGCCATAGTTGCTGTTTTGGCGGCTGCAGATTCTCTTTCCCAAGCAAGCCCATTTCGACTTCTAATTTGATTGTTGTTAGAAGGAGAACGGGGAGGCATGTGGTTCGAATGGCCCCGGAGGAAGAGAAGATCACTCGTCGCAATCCACTCGATTTCCCAATTGAGTGGGAGAGGCCAAAGCCAGGGCGTAGGCCAGACATTTTTCCTCAGTTTAGCCCCATGAAAACACCATTGCCACCACCATTGCCGTGTGATCCCCCTGAAGAGGATGAGGAGGAGGAAGAGAAAAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCCGAGAAGCAAAATATTGAAAGTGCGCAGGTCCCAGTGGCAGCAGTTGATGATTTGCAGCTTTTCTCTTCTTTGAAGAATCATCCATCCACAGGGCATCTGCTTTGGCTTCCTCTCTTATTCAAACTCATGAATCTTACTCCCACTCTGTTCAGGTCACTGTGA

Protein sequence

MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQNIESAQVPVAAVDDLQLFSSLKNHPSTGHLLWLPLLFKLMNLTPTLFRSL

Homology

[Close]

BLAST of Csor.00g215650 vs. NCBI nr
Match: KAG6589907.1 (hypothetical protein SDJN03_15330, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362 bits (930), Expect = 6.64e-126
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR
Sbjct: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQNIESAQVPVAAVDDLQLFSSLKNHPSTGHLLWLPLLF 180
           EEEKKEEEEENPDKENPDEPEKQNIESAQVPVAAVDDLQLFSSLKNHPSTGHLLWLPLLF
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQNIESAQVPVAAVDDLQLFSSLKNHPSTGHLLWLPLLF 180

Query: 181 KLMNLTPTLFRSL 193
           KLMNLTPTLFRSL
Sbjct: 181 KLMNLTPTLFRSL 193

[Close]

BLAST of Csor.00g215650 vs. NCBI nr
Match: XP_022960823.1 (uncharacterized protein LOC111461515 isoform X1 [Cucurbita moschata])

HSP 1 Score: 266 bits (680), Expect = 1.49e-88
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASICLLSSKTLVLPSAAYLP+SSSSST+HSCCFGGCRFSFPSKPISTSNLIVVRRRTGR
Sbjct: 1   MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 143

[Close]

BLAST of Csor.00g215650 vs. NCBI nr
Match: KAG7023577.1 (hypothetical protein SDJN02_14603 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266 bits (680), Expect = 1.49e-88
Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVR RTGR
Sbjct: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRGRTGR 60

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 143

[Close]

BLAST of Csor.00g215650 vs. NCBI nr
Match: XP_023516602.1 (uncharacterized protein LOC111780429 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023516603.1 uncharacterized protein LOC111780429 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023516604.1 uncharacterized protein LOC111780429 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264 bits (674), Expect = 1.22e-87
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASICLLSSKTLVLPSAAYLP+SSSSSTSHSCCFGGCRFSFP+KPIS SNLI+VRRRTGR
Sbjct: 1   MASICLLSSKTLVLPSAAYLPISSSSSTSHSCCFGGCRFSFPNKPISASNLIIVRRRTGR 60

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 143

[Close]

BLAST of Csor.00g215650 vs. NCBI nr
Match: XP_022987895.1 (uncharacterized protein LOC111485300 isoform X1 [Cucurbita maxima])

HSP 1 Score: 256 bits (655), Expect = 9.24e-85
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASICLLSSKTL LPSAAYLP+SSSS TSHSCCFGGCRFSFP+KPI TSNLI+VRRRTGR
Sbjct: 1   MASICLLSSKTLALPSAAYLPISSSS-TSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGR 60

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of Csor.00g215650 vs. ExPASy TrEMBL
Match: A0A6J1HA36 (uncharacterized protein LOC111461515 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461515 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 7.19e-89
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASICLLSSKTLVLPSAAYLP+SSSSST+HSCCFGGCRFSFPSKPISTSNLIVVRRRTGR
Sbjct: 1   MASICLLSSKTLVLPSAAYLPISSSSSTTHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 143

[Close]

BLAST of Csor.00g215650 vs. ExPASy TrEMBL
Match: A0A6J1JI28 (uncharacterized protein LOC111485300 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485300 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 4.47e-85
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASICLLSSKTL LPSAAYLP+SSSS TSHSCCFGGCRFSFP+KPI TSNLI+VRRRTGR
Sbjct: 1   MASICLLSSKTLALPSAAYLPISSSS-TSHSCCFGGCRFSFPNKPIPTSNLIIVRRRTGR 60

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
           HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of Csor.00g215650 vs. ExPASy TrEMBL
Match: A0A6J1F0T5 (uncharacterized protein LOC111441100 OS=Cucurbita moschata OX=3662 GN=LOC111441100 PE=4 SV=1)

HSP 1 Score: 229 bits (585), Expect = 2.04e-74
Identity = 126/143 (88.11%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASIC  SSKTLVLPSAAYLP+SSSS TSHS C  GCR SFP++PI+ SNLI+ RRRTGR
Sbjct: 1   MASICPFSSKTLVLPSAAYLPVSSSS-TSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGR 60

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
            VVRMAPEEEK+TRRNPLDFPIEW+RPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  LVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of Csor.00g215650 vs. ExPASy TrEMBL
Match: A0A5D3BLF1 (Coiled-coil domain-containing protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00600 PE=4 SV=1)

HSP 1 Score: 231 bits (588), Expect = 6.58e-74
Identity = 125/143 (87.41%), Postives = 131/143 (91.61%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASI L SSKTLV PSA YL +SSSSSTSHSCC GGCR SFP KP+STSNLI  RRRTGR
Sbjct: 67  MASISLFSSKTLVSPSATYLRISSSSSTSHSCCLGGCRCSFPIKPLSTSNLIFGRRRTGR 126

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
            VVRMAPEEEK+TRRNPLDFPIEWERP+PGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 127 QVVRMAPEEEKLTRRNPLDFPIEWERPRPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 186

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENP+ PE+Q
Sbjct: 187 EEEKKEEEEENPDKENPEGPEQQ 209

[Close]

BLAST of Csor.00g215650 vs. ExPASy TrEMBL
Match: A0A6J1HQ01 (uncharacterized protein LOC111465629 OS=Cucurbita maxima OX=3661 GN=LOC111465629 PE=4 SV=1)

HSP 1 Score: 228 bits (581), Expect = 8.28e-74
Identity = 125/143 (87.41%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSSSSTSHSCCFGGCRFSFPSKPISTSNLIVVRRRTGR 60
           MASICL SSKTLVLPSAAYL +SSSS TSHS C  GCR SFP++PI+ SNLI+ +RRTGR
Sbjct: 1   MASICLFSSKTLVLPSAAYLQVSSSS-TSHSFCVRGCRCSFPNRPIANSNLIIGKRRTGR 60

Query: 61  HVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120
            VVRMAPEEEK+TRRNPLDFPIEW+RPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE
Sbjct: 61  LVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 120

Query: 121 EEEKKEEEEENPDKENPDEPEKQ 143
           EEEKKEEEEENPDKENPDEPEKQ
Sbjct: 121 EEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of Csor.00g215650 vs. TAIR 10
Match: AT2G17240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-33
Identity = 93/145 (64.14%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 1   MASICLLSSKTLVLPSAAYLPMSSS-SSTSHSC-CFGGCRFSFPSKPISTSNLIVVRRRT 60
           MAS+C  S++ L  PS   L   +  SS S S  C     F+F S   S+S     R R 
Sbjct: 1   MASLC--SARFLPSPSLDILSTKTKISSDSRSLGCSSSRVFAFSSVHRSSSR----RNRN 60

Query: 61  GRHVVRMAPEEEKITRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEED 120
              VV MAPEEEK+TRRNPLDFPIEWERPKPGRRPDIFP+FSPMKTPLPPP+P DPPEED
Sbjct: 61  QLQVVSMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKTPLPPPMPYDPPEED 120

Query: 121 EEEEEKKEEEEENPDKENPDEPEKQ 144
           EEEEEKKEEEEENPD+E  ++PEKQ
Sbjct: 121 EEEEEKKEEEEENPDQEEEEQPEKQ 139

[Close]

BLAST of Csor.00g215650 vs. TAIR 10
Match: AT3G24506.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17240.1); Has 4864 Blast hits to 709 proteins in 125 species: Archae - 0; Bacteria - 592; Metazoa - 786; Fungi - 33; Plants - 410; Viruses - 61; Other Eukaryotes - 2982 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-28
Identity = 77/130 (59.23%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 21  PMSSSS----STSHSCCFGGCRFSFPSKPISTSNLIVVRR-RTGRHVVRMAPEEEKITRR 80
           P+SSSS    + S    F      F    I+     + R+ R    VV MAPEEEK+TRR
Sbjct: 20  PLSSSSLNRAAPSIFSPFSRINHGFSCSFIAVQRFALSRKTRKQLQVVAMAPEEEKLTRR 79

Query: 81  NPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEE-EENPDK 140
           NPLDFPIEWERPKPGRRPDIFP+FSPMK+PLPPP+P DPPEE+EEEEEKKEEE E++P+K
Sbjct: 80  NPLDFPIEWERPKPGRRPDIFPKFSPMKSPLPPPMPYDPPEEEEEEEEKKEEETEDDPEK 139

Query: 141 ENPDEPEKQN 145
           E+ D+P+ ++
Sbjct: 140 EDEDQPDNRS 149

The following BLAST results are available for this feature:

BLAST of Csor.00g215650 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g215650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589907.1	6.64e-126	100.00	hypothetical protein SDJN03_15330, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960823.1	1.49e-88	98.60	uncharacterized protein LOC111461515 isoform X1 [Cucurbita moschata]	[more]
KAG7023577.1	1.49e-88	99.30	hypothetical protein SDJN02_14603 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023516602.1	1.22e-87	97.20	uncharacterized protein LOC111780429 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022987895.1	9.24e-85	95.80	uncharacterized protein LOC111485300 isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g215650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HA36	7.19e-89	98.60	uncharacterized protein LOC111461515 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JI28	4.47e-85	95.80	uncharacterized protein LOC111485300 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F0T5	2.04e-74	88.11	uncharacterized protein LOC111441100 OS=Cucurbita moschata OX=3662 GN=LOC1114411...	[more]
A0A5D3BLF1	6.58e-74	87.41	Coiled-coil domain-containing protein 9-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1HQ01	8.28e-74	87.41	uncharacterized protein LOC111465629 OS=Cucurbita maxima OX=3661 GN=LOC111465629...	[more]

BLAST of Csor.00g215650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17240.1	1.0e-33	64.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G24506.1	3.8e-28	59.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..135
None	No IPR available	PANTHER	PTHR35713:SF4	SUBFAMILY NOT NAMED	coord: 11..141
None	No IPR available	PANTHER	PTHR35713	ARGININE/SERINE-RICH-LIKE SPLICING FACTOR	coord: 11..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g215650.m01	Csor.00g215650.m01	mRNA