Csor.00g215140 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g215140
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr10: 3184897 .. 3185466 (+)
RNA-Seq ExpressionCsor.00g215140
SyntenyCsor.00g215140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACAAGGCATTCCCACCAACGATTTCTTCCTCCTCTCCAATTCCTCCAAACAAATCACACAAACATCATCACTTTCAATCTCTTCAAATCTCACCCTCATCAACATCATCTCGATACCACGACTCCGATCACAACTCATTACTCCATCTTCCACTCGTCCATCGTAAAACATCCCGACATTCCAAACTTTCAGCGTAACAGTCAAACGAAAAACTCTCCCAAACGCATTCAAATCTTCCCTCACTCGAATTTCAATCCACTTCCGTTTGATCTCATCCGCTACCTTCTTAACATCAACGAGCTCGCTATAATCATCGAAGTGAACCGACAAACGGTTTTGCAACACGGGGTTGTTGTCGCGATCGATAACGGCAAGGGGAAGCTGGCAGATTGGGAAAGGAAGGCGTCGGTATCTATGGGCGGTGAAGGAAATTACGGTGTTGTTATTGGCTACTTGGATGTGACGGCATTTGACTTCGACACGGAATTTGAGGCTGATTTGTTGAAGGGTTTGAGGGGGAAGTGGTTGTTGAAGGTTGGGAGGGGAAGCTGTAACTTGGACTGA

mRNA sequence

ATGAAAACAAGGCATTCCCACCAACGATTTCTTCCTCCTCTCCAATTCCTCCAAACAAATCACACAAACATCATCACTTTCAATCTCTTCAAATCTCACCCTCATCAACATCATCTCGATACCACGACTCCGATCACAACTCATTACTCCATCTTCCACTCGTCCATCGTAAAACATCCCGACATTCCAAACTTTCAGCGTAACAGTCAAACGAAAAACTCTCCCAAACGCATTCAAATCTTCCCTCACTCGAATTTCAATCCACTTCCGTTTGATCTCATCCGCTACCTTCTTAACATCAACGAGCTCGCTATAATCATCGAAGTGAACCGACAAACGGTTTTGCAACACGGGGTTGTTGTCGCGATCGATAACGGCAAGGGGAAGCTGGCAGATTGGGAAAGGAAGGCGTCGGTATCTATGGGCGGTGAAGGAAATTACGGTGTTGTTATTGGCTACTTGGATGTGACGGCATTTGACTTCGACACGGAATTTGAGGCTGATTTGTTGAAGGGTTTGAGGGGGAAGTGGTTGTTGAAGGTTGGGAGGGGAAGCTGTAACTTGGACTGA

Coding sequence (CDS)

ATGAAAACAAGGCATTCCCACCAACGATTTCTTCCTCCTCTCCAATTCCTCCAAACAAATCACACAAACATCATCACTTTCAATCTCTTCAAATCTCACCCTCATCAACATCATCTCGATACCACGACTCCGATCACAACTCATTACTCCATCTTCCACTCGTCCATCGTAAAACATCCCGACATTCCAAACTTTCAGCGTAACAGTCAAACGAAAAACTCTCCCAAACGCATTCAAATCTTCCCTCACTCGAATTTCAATCCACTTCCGTTTGATCTCATCCGCTACCTTCTTAACATCAACGAGCTCGCTATAATCATCGAAGTGAACCGACAAACGGTTTTGCAACACGGGGTTGTTGTCGCGATCGATAACGGCAAGGGGAAGCTGGCAGATTGGGAAAGGAAGGCGTCGGTATCTATGGGCGGTGAAGGAAATTACGGTGTTGTTATTGGCTACTTGGATGTGACGGCATTTGACTTCGACACGGAATTTGAGGCTGATTTGTTGAAGGGTTTGAGGGGGAAGTGGTTGTTGAAGGTTGGGAGGGGAAGCTGTAACTTGGACTGA

Protein sequence

MKTRHSHQRFLPPLQFLQTNHTNIITFNLFKSHPHQHHLDTTTPITTHYSIFHSSIVKHPDIPNFQRNSQTKNSPKRIQIFPHSNFNPLPFDLIRYLLNINELAIIIEVNRQTVLQHGVVVAIDNGKGKLADWERKASVSMGGEGNYGVVIGYLDVTAFDFDTEFEADLLKGLRGKWLLKVGRGSCNLD
Homology
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BLAST of Csor.00g215140 vs. NCBI nr
Match: KAG6589958.1 (hypothetical protein SDJN03_15381, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 387 bits (993), Expect = 1.21e-135
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MKTRHSHQRFLPPLQFLQTNHTNIITFNLFKSHPHQHHLDTTTPITTHYSIFHSSIVKHP 60
           MKTRHSHQRFLPPLQFLQTNHTNIITFNLFKSHPHQHHLDTTTPITTHYSIFHSSIVKHP
Sbjct: 1   MKTRHSHQRFLPPLQFLQTNHTNIITFNLFKSHPHQHHLDTTTPITTHYSIFHSSIVKHP 60

Query: 61  DIPNFQRNSQTKNSPKRIQIFPHSNFNPLPFDLIRYLLNINELAIIIEVNRQTVLQHGVV 120
           DIPNFQRNSQTKNSPKRIQIFPHSNFNPLPFDLIRYLLNINELAIIIEVNRQTVLQHGVV
Sbjct: 61  DIPNFQRNSQTKNSPKRIQIFPHSNFNPLPFDLIRYLLNINELAIIIEVNRQTVLQHGVV 120

Query: 121 VAIDNGKGKLADWERKASVSMGGEGNYGVVIGYLDVTAFDFDTEFEADLLKGLRGKWLLK 180
           VAIDNGKGKLADWERKASVSMGGEGNYGVVIGYLDVTAFDFDTEFEADLLKGLRGKWLLK
Sbjct: 121 VAIDNGKGKLADWERKASVSMGGEGNYGVVIGYLDVTAFDFDTEFEADLLKGLRGKWLLK 180

Query: 181 VGRGSCNLD 189
           VGRGSCNLD
Sbjct: 181 VGRGSCNLD 189

The following BLAST results are available for this feature:
BLAST of Csor.00g215140 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g215140 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589958.11.21e-135100.00hypothetical protein SDJN03_15381, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g215140 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g215140 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g215140.m01Csor.00g215140.m01mRNA