Csor.00g213920 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g213920
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	wall-associated receptor kinase-like 2
Location	Csor_Chr10: 3929326 .. 3930162 (-)
RNA-Seq Expression	Csor.00g213920
Synteny	Csor.00g213920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCTCCTTTGCATCCTATTGTTGTTTGTGTTTCATCCTCTTCCTTTCCCTCTTTCCCATCCAATCAGTCAGCCAATACCCATATTTAGGCACTGCAAACCAGACATCCGGGTGCTCTATCAATGATACCAATTCAACACCAAATGGATATTATTCATGTAAGCATTTTCCTGCTGGCTCGTGTTCTTCCTATTTGATTGCAAAATCCAAGTCTCACAATCATGACTTGGGTTTCTACGATACATCATTTGGAAACACTAATTTGGTGATGAAGGCAGTTGATTGTAGCTGTGGTCGGGGTCATTTGTATGGGAATATCACGGAATATAATACTACGAGTGGTGATAGTTATGAAACAATAGCCAATCATGTTTTTTATGGCTTCACCAGCTGTTCTATGTTGAGAAGCTTTAACCCCAACCATTCTATTGATATCAATGCTTCCTCAACAGAAGAAGGAATCAGTGTTGAAGTTCCGTTGCGATGCGCTTGTCCTACCCAGGATCAGAAGAATGTTGGGATTCACTCATTGGCTGTGTATATGGTACAACCAAATGAGAGCATTACATCAATAGCCAGGGATTTGTTGGTTGACAAAGACACCATTTTGGATGCAAACATGCTTTCCAATACAACCCAACTCTACCCATTTACGCCTCTTTTGGTTCCGTTGAACAAATACGAGACTTGCAAACTCGACCCATCTAACTCAGACGCCTGTGTATCTCCGTATTTGGAGTCATATCTCAAATATGCTGCTACTATTGGTGTCATCATCATCATTGCATTTGGTCCGTCTCTTTCTCTTGCCTTGTTTACAATTTTTGTATGA

mRNA sequence

ATGGAAGCCTCCTTTGCATCCTATTGTTGTTTGTGTTTCATCCTCTTCCTTTCCCTCTTTCCCATCCAATCAGTCAGCCAATACCCATATTTAGGCACTGCAAACCAGACATCCGGGTGCTCTATCAATGATACCAATTCAACACCAAATGGATATTATTCATGTAAGCATTTTCCTGCTGGCTCGTGTTCTTCCTATTTGATTGCAAAATCCAAGTCTCACAATCATGACTTGGGTTTCTACGATACATCATTTGGAAACACTAATTTGGTGATGAAGGCAGTTGATTGTAGCTGTGGTCGGGGTCATTTGTATGGGAATATCACGGAATATAATACTACGAGTGGTGATAGTTATGAAACAATAGCCAATCATGTTTTTTATGGCTTCACCAGCTGTTCTATGTTGAGAAGCTTTAACCCCAACCATTCTATTGATATCAATGCTTCCTCAACAGAAGAAGGAATCAGTGTTGAAGTTCCGTTGCGATGCGCTTGTCCTACCCAGGATCAGAAGAATGTTGGGATTCACTCATTGGCTGTGTATATGGTACAACCAAATGAGAGCATTACATCAATAGCCAGGGATTTGTTGGTTGACAAAGACACCATTTTGGATGCAAACATGCTTTCCAATACAACCCAACTCTACCCATTTACGCCTCTTTTGGTTCCGTTGAACAAATACGAGACTTGCAAACTCGACCCATCTAACTCAGACGCCTGTGTATCTCCGTATTTGGAGTCATATCTCAAATATGCTGCTACTATTGGTGTCATCATCATCATTGCATTTGGTCCGTCTCTTTCTCTTGCCTTGTTTACAATTTTTGTATGA

Coding sequence (CDS)

ATGGAAGCCTCCTTTGCATCCTATTGTTGTTTGTGTTTCATCCTCTTCCTTTCCCTCTTTCCCATCCAATCAGTCAGCCAATACCCATATTTAGGCACTGCAAACCAGACATCCGGGTGCTCTATCAATGATACCAATTCAACACCAAATGGATATTATTCATGTAAGCATTTTCCTGCTGGCTCGTGTTCTTCCTATTTGATTGCAAAATCCAAGTCTCACAATCATGACTTGGGTTTCTACGATACATCATTTGGAAACACTAATTTGGTGATGAAGGCAGTTGATTGTAGCTGTGGTCGGGGTCATTTGTATGGGAATATCACGGAATATAATACTACGAGTGGTGATAGTTATGAAACAATAGCCAATCATGTTTTTTATGGCTTCACCAGCTGTTCTATGTTGAGAAGCTTTAACCCCAACCATTCTATTGATATCAATGCTTCCTCAACAGAAGAAGGAATCAGTGTTGAAGTTCCGTTGCGATGCGCTTGTCCTACCCAGGATCAGAAGAATGTTGGGATTCACTCATTGGCTGTGTATATGGTACAACCAAATGAGAGCATTACATCAATAGCCAGGGATTTGTTGGTTGACAAAGACACCATTTTGGATGCAAACATGCTTTCCAATACAACCCAACTCTACCCATTTACGCCTCTTTTGGTTCCGTTGAACAAATACGAGACTTGCAAACTCGACCCATCTAACTCAGACGCCTGTGTATCTCCGTATTTGGAGTCATATCTCAAATATGCTGCTACTATTGGTGTCATCATCATCATTGCATTTGGTCCGTCTCTTTCTCTTGCCTTGTTTACAATTTTTGTATGA

Protein sequence

MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPAGSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYETIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLAVYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSDACVSPYLESYLKYAATIGVIIIIAFGPSLSLALFTIFV

Homology

[Close]

BLAST of Csor.00g213920 vs. ExPASy Swiss-Prot
Match: O64825 (LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 77/264 (29.17%), Postives = 124/264 (46.97%), Query Frame = 0


Query: 4   SFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPAGSC 63
           SF+ +  +  +L LS F   + +Q PY+G +  T+ CS++D  ++  G YSC      +C
Sbjct: 3   SFSFHLLVFILLSLSSF---ATAQQPYVGIS--TTDCSVSDNTTSVFG-YSCNGLNK-TC 62

Query: 64  SSYLIAKSK--------------------SHNHDLGFYDTSFGNTNLVMKAVDCSCGRGH 123
            +Y+I +S                     S  +D     TSF +   V+  + CSC    
Sbjct: 63  QAYVIFRSTPSFSTVTSISSLFSVDPSLVSSLNDAS-PSTSFPSGQQVIIPLTCSCTGDD 122

Query: 124 LYGNITEYNTTSGDSYETIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLR 183
              NIT Y     DSY  IAN    G ++C  L   N     ++++ S   G+ + VP+R
Sbjct: 123 SQSNIT-YTIQPNDSYFAIANDTLQGLSTCQALAKQN-----NVSSQSLFPGMRIVVPIR 182

Query: 184 CACPTQDQKNV-GIHSLAVYMVQPNESITSIARDLLVDKDTILDANMLS-NTTQLYPFTP 243
           CACPT  Q N  G+  L  Y V   ++I  I+    V+    L AN +S   ++++PFT 
Sbjct: 183 CACPTAKQINEDGVKYLMSYTVVFEDTIAIISDRFGVETSKTLKANEMSFENSEVFPFTT 242

Query: 244 LLVPLNKYETCKLDPSNSDACVSP 246
           +L+PL         P+N+++ + P
Sbjct: 243 ILIPLVN------PPANTNSLIPP 246

[Close]

BLAST of Csor.00g213920 vs. ExPASy Swiss-Prot
Match: O22808 (Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.7e-11
Identity = 68/246 (27.64%), Postives = 107/246 (43.50%), Query Frame = 0


Query: 11  LCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPAGSCSSYL--- 70
           L  +LF ++ P +  +Q PY+   N    C +   ++  NG ++C   P  SC SYL   
Sbjct: 13  LFLLLFFAVSPAK--AQQPYVN--NHQLACEVRVYDNITNG-FTCNGPP--SCRSYLTFW 72

Query: 71  ----------IAKSKSHN-------HDLGFYDTSFGNTNLVMKAVDCSC--GRGHLYGNI 130
                     IAK  + +       ++L    T      LV+   +CSC    G  Y + 
Sbjct: 73  SQPPYNTADSIAKLLNVSAAEIQSINNLPTATTRIPTRELVVIPANCSCSSSSGGFYQHN 132

Query: 131 TEYNTTSG---DSYETIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCA 190
             YN +     ++Y ++AN  +   ++C  + S N              G+++ VPLRCA
Sbjct: 133 ATYNLSGNRGDETYFSVANDTYQALSTCQAMMSQN-----RYGERQLTPGLNLLVPLRCA 192

Query: 191 CPTQDQKNVGIHSLAVYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVP 232
           CPT  Q   G   L  Y+V   +SI+ IA         I + N L+ +  ++ FTP+LVP
Sbjct: 193 CPTAKQTTAGFKYLLTYLVAMGDSISGIAEMFNSTSAAITEGNELT-SDNIFFFTPVLVP 245

[Close]

BLAST of Csor.00g213920 vs. ExPASy Swiss-Prot
Match: Q6UD73 (LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.0e-06
Identity = 39/144 (27.08%), Postives = 68/144 (47.22%), Query Frame = 0


Query: 73  SHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYETIANHVFYGFTS 132
           S+N D+ F  +   +   +     C C  G   G++ EY T  GD Y+ IAN  +   T+
Sbjct: 66  SYNRDVVFDKSGLISYTRINVPFPCECIGGEFLGHVFEYTTKEGDDYDLIANTYYASLTT 125

Query: 133 CSMLRSFN---PNHSIDINASSTEEGISVEVPLRCAC-PTQDQKNVGIHSLAVYMVQPNE 192
             +L+ FN   PNH I + A        + V + C+C  +Q  K+ G+     Y ++ ++
Sbjct: 126 VELLKKFNSYDPNH-IPVKA-------KINVTVICSCGNSQISKDYGL--FVTYPLRSDD 185

Query: 193 SITSIARDLLVDKDTILDANMLSN 213
           ++  IA    +D+  I + N  +N
Sbjct: 186 TLAKIATKAGLDEGLIQNFNQDAN 199

[Close]

BLAST of Csor.00g213920 vs. NCBI nr
Match: KAG6590080.1 (LysM domain receptor-like kinase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 564 bits (1453), Expect = 8.39e-203
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60
           MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA
Sbjct: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60

Query: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE 120
           GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE
Sbjct: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE 120

Query: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA 180
           TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA
Sbjct: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA 180

Query: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD 240
           VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD
Sbjct: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD 240

Query: 241 ACVSPYLESYLKYAATIGVIIIIAFGPSLSLALFTIFV 278
           ACVSPYLESYLKYAATIGVIIIIAFGPSLSLALFTIFV
Sbjct: 241 ACVSPYLESYLKYAATIGVIIIIAFGPSLSLALFTIFV 278

[Close]

BLAST of Csor.00g213920 vs. NCBI nr
Match: XP_022961349.1 (wall-associated receptor kinase-like 2 [Cucurbita moschata])

HSP 1 Score: 520 bits (1338), Expect = 8.84e-180
Identity = 256/271 (94.46%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60
           MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA
Sbjct: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60

Query: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE 120
           GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAV CSCG GHLYGNITEYNTTSGDSYE
Sbjct: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVGCSCGGGHLYGNITEYNTTSGDSYE 120

Query: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA 180
           TIANHVFYGFTSCSMLRSFNPNHS+DINASSTE GISVEVPLRCACPTQDQK VGIHSLA
Sbjct: 121 TIANHVFYGFTSCSMLRSFNPNHSMDINASSTE-GISVEVPLRCACPTQDQKKVGIHSLA 180

Query: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD 240
           VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLN YETCKLDPSNSD
Sbjct: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNTYETCKLDPSNSD 240

Query: 241 ACVSPYLESYLKYAATIGVIIIIAFGPSLSL 271
           ACVSPYLE YLKYAATIG II IAF   + +
Sbjct: 241 ACVSPYLEWYLKYAATIGFIIFIAFASGIGM 270

[Close]

BLAST of Csor.00g213920 vs. NCBI nr
Match: KAG6590079.1 (LysM domain receptor-like kinase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 450 bits (1157), Expect = 1.34e-157
Identity = 227/264 (85.98%), Postives = 239/264 (90.53%), Query Frame = 0


Query: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60
           MEASFAS+CCLCFILFLSLFPIQ VSQ+PYLGT+NQTSGCSINDTNSTPNGYYSC +  +
Sbjct: 1   MEASFASHCCLCFILFLSLFPIQCVSQHPYLGTSNQTSGCSINDTNSTPNGYYSCAYVSS 60

Query: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE 120
            SCSSYLIAK KSHNHDLGFYDTSFGNTNLVMKAV CSCG  HLYGNITEYNTTSGDSYE
Sbjct: 61  SSCSSYLIAKYKSHNHDLGFYDTSFGNTNLVMKAVGCSCGGDHLYGNITEYNTTSGDSYE 120

Query: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA 180
           TIANHVF+GFTSCSMLRSFNPNHSIDINASSTE GISVEV LRCACPT+DQKN GI SL 
Sbjct: 121 TIANHVFHGFTSCSMLRSFNPNHSIDINASSTE-GISVEVRLRCACPTKDQKNSGIESLV 180

Query: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD 240
           VYMVQPNESI+SIARDL+VDKDTILDANMLSNTTQLYPFTPLLVPLN YETCKLDPSNS+
Sbjct: 181 VYMVQPNESISSIARDLVVDKDTILDANMLSNTTQLYPFTPLLVPLNTYETCKLDPSNSN 240

Query: 241 ACVSPYLESYLKYAATIGVIIIIA 264
            C   Y +SY K A  IG+I IIA
Sbjct: 241 VC-DRYRDSYFK-ALIIGIIYIIA 261

[Close]

BLAST of Csor.00g213920 vs. NCBI nr
Match: XP_022987096.1 (wall-associated receptor kinase-like 2 [Cucurbita maxima])

HSP 1 Score: 458 bits (1179), Expect = 7.58e-156
Identity = 230/271 (84.87%), Postives = 244/271 (90.04%), Query Frame = 0


Query: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60
           MEASFASYCCLCFILFLSLFPIQSVS+YPYLGTANQTSGCSINDTNSTPNGYYSC + P 
Sbjct: 1   MEASFASYCCLCFILFLSLFPIQSVSKYPYLGTANQTSGCSINDTNSTPNGYYSCAYVPY 60

Query: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE 120
            SCSSYLIAKSKSHN DLGFYD S GNTNL+MKAV CSCG  HLYGNI EYNTTSGDSYE
Sbjct: 61  SSCSSYLIAKSKSHNQDLGFYDKSIGNTNLLMKAVGCSCGGDHLYGNIMEYNTTSGDSYE 120

Query: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA 180
           TIANHVFYGFTSCSMLRSFNPNHSIDINASSTE GISVEV LRCACPTQDQKN+GI SLA
Sbjct: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTE-GISVEVWLRCACPTQDQKNLGIQSLA 180

Query: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD 240
           VYMVQPNESI+SIARDLLV++D+IL+ANMLSNTTQLYPFTPLLVPLN  ETCK+DPSNSD
Sbjct: 181 VYMVQPNESISSIARDLLVEQDSILEANMLSNTTQLYPFTPLLVPLNTSETCKIDPSNSD 240

Query: 241 ACVSPYLESYLKYAATIGVIIIIAFGPSLSL 271
           ACVS YL+SYLK+ A I  II I F   + +
Sbjct: 241 ACVSRYLKSYLKFVA-IAAIISITFAIGIGM 269

[Close]

BLAST of Csor.00g213920 vs. NCBI nr
Match: XP_022987476.1 (protein LYK5-like [Cucurbita maxima])

HSP 1 Score: 422 bits (1085), Expect = 5.61e-147
Identity = 224/278 (80.58%), Postives = 237/278 (85.25%), Query Frame = 0


Query: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60
           MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSC   P 
Sbjct: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCD-VPY 60

Query: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE 120
            SCSSYLIAKSKSHN DLGFYD S GNTNL+MKAV CSCG  HLY NITEYNTTSGDS+E
Sbjct: 61  SSCSSYLIAKSKSHNQDLGFYDKSIGNTNLLMKAVGCSCGEDHLYRNITEYNTTSGDSFE 120

Query: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA 180
           TIANHVF GFTSC          SI INASSTE GISVEV LRCACPTQDQKN+GI SLA
Sbjct: 121 TIANHVFDGFTSC----------SIGINASSTE-GISVEVWLRCACPTQDQKNLGIQSLA 180

Query: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD 240
           VYMVQPNESI+SIARDLLV++D+IL+ANMLSNTTQLYPFTPLLVPLN  ET K+DPSNSD
Sbjct: 181 VYMVQPNESISSIARDLLVEQDSILEANMLSNTTQLYPFTPLLVPLNTSETFKIDPSNSD 240

Query: 241 ACVSPYLESYLKYAATIGVIIIIAFGPSLSLALFTIFV 278
           ACVS +L+  +  A+ I     IAFGPSLSLALFTIFV
Sbjct: 241 ACVSQHLDLVVIVASIIS----IAFGPSLSLALFTIFV 262

[Close]

BLAST of Csor.00g213920 vs. ExPASy TrEMBL
Match: A0A6J1HDS3 (wall-associated receptor kinase-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111461865 PE=4 SV=1)

HSP 1 Score: 520 bits (1338), Expect = 4.28e-180
Identity = 256/271 (94.46%), Postives = 259/271 (95.57%), Query Frame = 0


Query: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60
           MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA
Sbjct: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60

Query: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE 120
           GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAV CSCG GHLYGNITEYNTTSGDSYE
Sbjct: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVGCSCGGGHLYGNITEYNTTSGDSYE 120

Query: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA 180
           TIANHVFYGFTSCSMLRSFNPNHS+DINASSTE GISVEVPLRCACPTQDQK VGIHSLA
Sbjct: 121 TIANHVFYGFTSCSMLRSFNPNHSMDINASSTE-GISVEVPLRCACPTQDQKKVGIHSLA 180

Query: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD 240
           VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLN YETCKLDPSNSD
Sbjct: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNTYETCKLDPSNSD 240

Query: 241 ACVSPYLESYLKYAATIGVIIIIAFGPSLSL 271
           ACVSPYLE YLKYAATIG II IAF   + +
Sbjct: 241 ACVSPYLEWYLKYAATIGFIIFIAFASGIGM 270

[Close]

BLAST of Csor.00g213920 vs. ExPASy TrEMBL
Match: A0A6J1JD61 (wall-associated receptor kinase-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111484752 PE=4 SV=1)

HSP 1 Score: 458 bits (1179), Expect = 3.67e-156
Identity = 230/271 (84.87%), Postives = 244/271 (90.04%), Query Frame = 0


Query: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60
           MEASFASYCCLCFILFLSLFPIQSVS+YPYLGTANQTSGCSINDTNSTPNGYYSC + P 
Sbjct: 1   MEASFASYCCLCFILFLSLFPIQSVSKYPYLGTANQTSGCSINDTNSTPNGYYSCAYVPY 60

Query: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE 120
            SCSSYLIAKSKSHN DLGFYD S GNTNL+MKAV CSCG  HLYGNI EYNTTSGDSYE
Sbjct: 61  SSCSSYLIAKSKSHNQDLGFYDKSIGNTNLLMKAVGCSCGGDHLYGNIMEYNTTSGDSYE 120

Query: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA 180
           TIANHVFYGFTSCSMLRSFNPNHSIDINASSTE GISVEV LRCACPTQDQKN+GI SLA
Sbjct: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTE-GISVEVWLRCACPTQDQKNLGIQSLA 180

Query: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD 240
           VYMVQPNESI+SIARDLLV++D+IL+ANMLSNTTQLYPFTPLLVPLN  ETCK+DPSNSD
Sbjct: 181 VYMVQPNESISSIARDLLVEQDSILEANMLSNTTQLYPFTPLLVPLNTSETCKIDPSNSD 240

Query: 241 ACVSPYLESYLKYAATIGVIIIIAFGPSLSL 271
           ACVS YL+SYLK+ A I  II I F   + +
Sbjct: 241 ACVSRYLKSYLKFVA-IAAIISITFAIGIGM 269

[Close]

BLAST of Csor.00g213920 vs. ExPASy TrEMBL
Match: A0A6J1JEB2 (protein LYK5-like OS=Cucurbita maxima OX=3661 GN=LOC111485017 PE=4 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 2.71e-147
Identity = 224/278 (80.58%), Postives = 237/278 (85.25%), Query Frame = 0


Query: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPA 60
           MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSC   P 
Sbjct: 1   MEASFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCD-VPY 60

Query: 61  GSCSSYLIAKSKSHNHDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYE 120
            SCSSYLIAKSKSHN DLGFYD S GNTNL+MKAV CSCG  HLY NITEYNTTSGDS+E
Sbjct: 61  SSCSSYLIAKSKSHNQDLGFYDKSIGNTNLLMKAVGCSCGEDHLYRNITEYNTTSGDSFE 120

Query: 121 TIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLA 180
           TIANHVF GFTSC          SI INASSTE GISVEV LRCACPTQDQKN+GI SLA
Sbjct: 121 TIANHVFDGFTSC----------SIGINASSTE-GISVEVWLRCACPTQDQKNLGIQSLA 180

Query: 181 VYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSD 240
           VYMVQPNESI+SIARDLLV++D+IL+ANMLSNTTQLYPFTPLLVPLN  ET K+DPSNSD
Sbjct: 181 VYMVQPNESISSIARDLLVEQDSILEANMLSNTTQLYPFTPLLVPLNTSETFKIDPSNSD 240

Query: 241 ACVSPYLESYLKYAATIGVIIIIAFGPSLSLALFTIFV 278
           ACVS +L+  +  A+ I     IAFGPSLSLALFTIFV
Sbjct: 241 ACVSQHLDLVVIVASIIS----IAFGPSLSLALFTIFV 262

[Close]

BLAST of Csor.00g213920 vs. ExPASy TrEMBL
Match: A0A6J1DGL8 (wall-associated receptor kinase-like 1 OS=Momordica charantia OX=3673 GN=LOC111019885 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 4.04e-53
Identity = 120/257 (46.69%), Postives = 161/257 (62.65%), Query Frame = 0


Query: 17  LSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPAGSCSSYLIAKSKSH-N 76
           L  FP+QS+ Q PY+G  NQT+ CS+NDT ST  GY         SC SYLI +S S  +
Sbjct: 8   LFFFPLQSLCQQPYIG--NQTN-CSMNDT-STSKGYICTDSI--FSCQSYLIFRSDSLLS 67

Query: 77  HDLGFYDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSYETIANHVFYGFTSCSM 136
           +DL   + + G   L     DC C  G  Y  I  Y    GDSYE I N +F GFTSCS+
Sbjct: 68  YDLYLLNFTLGKNTLFRTTADCGCW-GLYYHYIAYYTIKKGDSYEKIVNDIFQGFTSCSV 127

Query: 137 LRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSLAVYMVQPNESITSIAR 196
           LRS + +++ID N SS   G  ++VPL CACPT+ QK  G+  LAVYM+QPNESI S+AR
Sbjct: 128 LRSVSLDYAID-NTSSV--GRRLQVPLGCACPTKAQKAKGVEFLAVYMLQPNESIGSVAR 187

Query: 197 DLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSNSDAC--VSPYLES---Y 256
           D  V+++ IL+ANMLS ++Q +PFTP+L+PLNK  TC++DPS+   C  + P   +   Y
Sbjct: 188 DFGVEEEGILEANMLSMSSQTFPFTPILIPLNKNVTCRIDPSSYYDCNAIPPPTSNDNDY 247

Query: 257 LKYAATI---GVIIIIA 264
           + Y   I   GVI++++
Sbjct: 248 ILYIVLIAIGGVIVLVS 254

[Close]

BLAST of Csor.00g213920 vs. ExPASy TrEMBL
Match: A0A6J1DGN3 (lysM domain receptor-like kinase 4 OS=Momordica charantia OX=3673 GN=LOC111019906 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 2.55e-46
Identity = 107/239 (44.77%), Postives = 147/239 (61.51%), Query Frame = 0


Query: 15  LFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGY------YSCKHFPAGSCSSYLI 74
           LFLSLF  QS+ Q  Y+G  N+T+ CS N+T STP GY      YSC        SSYL 
Sbjct: 8   LFLSLFLRQSLCQQSYVG--NETN-CS-NNTTSTPKGYVCIDSIYSCS-------SSYLT 67

Query: 75  AKSK------SHNHDL--GF-YDTSFGNTNLVMKAVDCSCGRGHLYGNITEYNTTSGDSY 134
            +SK      S   DL  G+ Y T+  N +L   ++ CSC R   Y  I+ Y    GDSY
Sbjct: 68  FRSKPPYDTQSTISDLFAGYVYKTTLNNGSLFATSISCSCVR-RSYRTISYYTIKRGDSY 127

Query: 135 ETIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCACPTQDQKNVGIHSL 194
           E IA  ++ G  SCS L+S N       N SS +  + ++VPLRCACPT+ Q+  G+ +L
Sbjct: 128 EKIAYDIYQGLVSCSALKSQNQQDYAVDNTSSID--MILQVPLRCACPTKAQEANGVKAL 187

Query: 195 AVYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVPLNKYETCKLDPSN 238
            VYM+QP+ESI S+ARD  V++ ++L+AN LSNT+++YPFTP+LVPLN+ + C++ P +
Sbjct: 188 YVYMLQPDESIGSVARDFGVEEHSVLEANKLSNTSRIYPFTPILVPLNQTDICRIHPDS 232

[Close]

BLAST of Csor.00g213920 vs. TAIR 10
Match: AT2G23770.1 (protein kinase family protein / peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 82.0 bits (201), Expect = 8.1e-16
Identity = 77/264 (29.17%), Postives = 124/264 (46.97%), Query Frame = 0


Query: 4   SFASYCCLCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPAGSC 63
           SF+ +  +  +L LS F   + +Q PY+G +  T+ CS++D  ++  G YSC      +C
Sbjct: 3   SFSFHLLVFILLSLSSF---ATAQQPYVGIS--TTDCSVSDNTTSVFG-YSCNGLNK-TC 62

Query: 64  SSYLIAKSK--------------------SHNHDLGFYDTSFGNTNLVMKAVDCSCGRGH 123
            +Y+I +S                     S  +D     TSF +   V+  + CSC    
Sbjct: 63  QAYVIFRSTPSFSTVTSISSLFSVDPSLVSSLNDAS-PSTSFPSGQQVIIPLTCSCTGDD 122

Query: 124 LYGNITEYNTTSGDSYETIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLR 183
              NIT Y     DSY  IAN    G ++C  L   N     ++++ S   G+ + VP+R
Sbjct: 123 SQSNIT-YTIQPNDSYFAIANDTLQGLSTCQALAKQN-----NVSSQSLFPGMRIVVPIR 182

Query: 184 CACPTQDQKNV-GIHSLAVYMVQPNESITSIARDLLVDKDTILDANMLS-NTTQLYPFTP 243
           CACPT  Q N  G+  L  Y V   ++I  I+    V+    L AN +S   ++++PFT 
Sbjct: 183 CACPTAKQINEDGVKYLMSYTVVFEDTIAIISDRFGVETSKTLKANEMSFENSEVFPFTT 242

Query: 244 LLVPLNKYETCKLDPSNSDACVSP 246
           +L+PL         P+N+++ + P
Sbjct: 243 ILIPLVN------PPANTNSLIPP 246

[Close]

BLAST of Csor.00g213920 vs. TAIR 10
Match: AT2G33580.1 (Protein kinase superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 5.5e-12
Identity = 68/246 (27.64%), Postives = 107/246 (43.50%), Query Frame = 0


Query: 11  LCFILFLSLFPIQSVSQYPYLGTANQTSGCSINDTNSTPNGYYSCKHFPAGSCSSYL--- 70
           L  +LF ++ P +  +Q PY+   N    C +   ++  NG ++C   P  SC SYL   
Sbjct: 13  LFLLLFFAVSPAK--AQQPYVN--NHQLACEVRVYDNITNG-FTCNGPP--SCRSYLTFW 72

Query: 71  ----------IAKSKSHN-------HDLGFYDTSFGNTNLVMKAVDCSC--GRGHLYGNI 130
                     IAK  + +       ++L    T      LV+   +CSC    G  Y + 
Sbjct: 73  SQPPYNTADSIAKLLNVSAAEIQSINNLPTATTRIPTRELVVIPANCSCSSSSGGFYQHN 132

Query: 131 TEYNTTSG---DSYETIANHVFYGFTSCSMLRSFNPNHSIDINASSTEEGISVEVPLRCA 190
             YN +     ++Y ++AN  +   ++C  + S N              G+++ VPLRCA
Sbjct: 133 ATYNLSGNRGDETYFSVANDTYQALSTCQAMMSQN-----RYGERQLTPGLNLLVPLRCA 192

Query: 191 CPTQDQKNVGIHSLAVYMVQPNESITSIARDLLVDKDTILDANMLSNTTQLYPFTPLLVP 232
           CPT  Q   G   L  Y+V   +SI+ IA         I + N L+ +  ++ FTP+LVP
Sbjct: 193 CPTAKQTTAGFKYLLTYLVAMGDSISGIAEMFNSTSAAITEGNELT-SDNIFFFTPVLVP 245

The following BLAST results are available for this feature:

BLAST of Csor.00g213920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64825	1.1e-14	29.17	LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 ...	[more]
O22808	7.7e-11	27.64	Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1	[more]
Q6UD73	2.0e-06	27.08	LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 S...	[more]

BLAST of Csor.00g213920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6590080.1	8.39e-203	100.00	LysM domain receptor-like kinase 4, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022961349.1	8.84e-180	94.46	wall-associated receptor kinase-like 2 [Cucurbita moschata]	[more]
KAG6590079.1	1.34e-157	85.98	LysM domain receptor-like kinase 4, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022987096.1	7.58e-156	84.87	wall-associated receptor kinase-like 2 [Cucurbita maxima]	[more]
XP_022987476.1	5.61e-147	80.58	protein LYK5-like [Cucurbita maxima]	[more]

BLAST of Csor.00g213920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDS3	4.28e-180	94.46	wall-associated receptor kinase-like 2 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1JD61	3.67e-156	84.87	wall-associated receptor kinase-like 2 OS=Cucurbita maxima OX=3661 GN=LOC1114847...	[more]
A0A6J1JEB2	2.71e-147	80.58	protein LYK5-like OS=Cucurbita maxima OX=3661 GN=LOC111485017 PE=4 SV=1	[more]
A0A6J1DGL8	4.04e-53	46.69	wall-associated receptor kinase-like 1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1DGN3	2.55e-46	44.77	lysM domain receptor-like kinase 4 OS=Momordica charantia OX=3673 GN=LOC11101990...	[more]

BLAST of Csor.00g213920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23770.1	8.1e-16	29.17	protein kinase family protein / peptidoglycan-binding LysM domain-containing pro...	[more]
AT2G33580.1	5.5e-12	27.64	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 181..225 e-value: 4.8E-4 score: 29.4
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 182..225 e-value: 7.5E-6 score: 25.9
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 180..224 score: 9.636722
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 181..224 e-value: 1.1075E-4 score: 37.0797
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 178..233 e-value: 8.3E-7 score: 30.7
None	No IPR available	PANTHER	PTHR45927	LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED	coord: 13..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g213920.m01	Csor.00g213920.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity