Csor.00g213900 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACATGGTAAGTGAGTTGTATCATAAATAATATAAATAATTAAAATATGTGAATTTAACCATATTGGGAAAAATTGTGAGTTATAGTATAGCTGACACATTAATCCAATCATGATAAATAAATTAGAGACTGATCCATAAATTATTTTAATAGACGGGTGCTAAAATTTAGTCTTGATCGAAAATAATGGATCTTATTGTTGTTCGGGTTAAAAAAATACATTTTATAACAAGAATTTTAAAAATGTTGTGACCCGTGCTCTTTAATGATGAGATATTAAATAGACGTGTAATACTATAAATACGGTTGAAATACTATGACTTAAGGTGTTTGTGGGTTGGGTCGGGTCCGATTGTGTGATGTCCCACATTGGTTGAGGAGGAGAACAAGCCACGATTTATGGGTGTGGAAACCTTCCTCTAGCATACGTGTTTAAAAACCTTGAGGGGAAACTCGAAAGAGAAAGTCCAAAGAGGACAATATCTACTAGCGGTGGATCTGGGTCGTTACAAATGGTATTAGAGTCAGGTTCCGGACGATGTGCCAGCGTTTTCGCTCTTCTTCGAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCCAAAGGGGAGTGGATTTGGGAGTGATCCCACATCGATTGAAGGAAGGAAAAGTGCCAGCAAGGACAATATTTACGTGGTTGATCTGGATCGTTATAGATCGTTTGTTACATTTTTTTAGACCCAACCTGAATGTTTGAGTTATAAATTTTATCAGAACTTTTATTAAATAATGAACCTAACTCAACTCAACTCTGTTCAGAGTTATTTTGATTATTTATTCAAATTTTTATTATAATAAAAGTAAAATATTAGTCCGTAAAACATTTTTTTTATTAATTTTTACACATTTAATTAAAATTTATCATTTATTTTCAATATATATTTGAAAAAGTTATTTTTAAGAGCGGTAAGAGAACGCTCATGTTTTCTAAAATATTTCTCTCAAATGTAACTCGATGCTCGAACATACGTCGTTATTGTCCGCAAAGTGTGAATTTCAGACGGATTAACTTGTTCGCTGGGTTATAACGAGTGTTGCATCATTGCTGTATCGTTGCTACAAGAGTGAAATTGAAATAGGGGTCGAGAAATAAATTTAAATATTTTTAAAATCATCAAAATTAAAATTTTAGAAATTTATTATACCAATTTAAATCCATTATTTCTTTTTTTTTTTTTTTTTGTAAAAAAAAATTAATTTTGTTGGGAAATTTACCTTTGCCTTTCTTCTTCTTCGCTTAGGTCTTCTCCGCTTTATTTTCTTCCAGTACCAGTAAACCGCCGCCGCCAGCTTCCGACGATTGCGTTCCCTCTGTAGCAGCTAAACGCCAAACCAAACTTTCAATCTTTAGGTATTCCTTTATTTCAATGTTGGAGCACACTAGAATTTTGCAGTAATTGTTTAATTTATCTGCCGACTGATTCCTTACCGTGTTTCGATTGGCCCTGCTTCATTTTACACTTGCAACGCTCTGATACTTTCTGCATCGATTTGATATAGTTTCAAGCGGTTTCACCTTTTTCTTGAATTATATGATAGTTCTTGCAAAATCTTTATGGGATTCTTCAATGATTCTTCGAAAGAGTGTAGAGAGCGAGAGAGAACTTGAAACTTTTTCGATTTTTCAATTATATGTGATTATTATGGATCTATTTTTTATTTGGTTGCTGTTTTTCCCCTAAATTTTGACAGAATCTGGTATTCTTGATTCTTTATGAACTTTTGAAGATCAAGGATGTTGCCAACTGATGACTTGAAGAAGATATCTTTCACTCATTCTATAAGGGATGGAGATTTAGTCATTGTTTATGAGAGACATGATGTCATGAAGGCTGTGAAAGTATGTGAAAATTCAACATTTCAGAATAGGTTTGGTATGTTTAAACATTCTGATTGGATTGGAAAGCCATTTGGGTCCAAGGTGTTGAGTAACAAAGGTGGCTTTGTTTACCTATTAGCCCCAACTCCTGAATTATGGACTTTGGTTCTAAGCCACAGGACACAGATTCTATACATTGCGGACATTAGTTTTGTAATTATGTTCTTAGAGATAGTTCCTGGTTGTTTGATTCTAGAATCAGGGACTGGCAGTGGATCTTTGACGACGTCTTTAGCTAGGGCTGTAGCGCCTACCGGACATGTCTATACGTTTGATTTTCATGAACAGAGAGCTGCCTCGGCAAGGTAGGAACCGGGATCTTTTATATGTTGTCAAGTTATACCCTGCTGAGTAATTGTGTTCTATGATAATTTGCTTGTCTACCTCTTTTTTCAGAGAGGATTTTGAGAAGACTGGCTTGACCAGCTTAGTCACTGTGGGAGTTAGAGATGTTCAAGGTCAGGGCTTCCCTGAAGAGTTTGTTGGATTGGCAGATTCAGTTTTCTTGGATCTACCTCAACCTTGGTTGGCCATTCCTTCAGCTGAGAGAATGCTGAAACAAGACGGCGTATTATGCTCGTTCTCTCCATGTATCGAGCAAGTTCAACGGTCGGCCGAAACTCTACGATCTAAGTTTACAGGTTGTTCCGAATGACCCATTTATATACCTTCATTCCTATAGATATGTTGATATGTATTATTCACTATTGTCGTCGTCGTCGTCCCTTTTGTGTAGATATAAGAACATTTGAGGTATTGCTTCGGACTTACGAGGTTCGAGAAGGTAAAACAGAGAGCAGCCAGGTTGAAGGAGGTGGTTCTGTCGAGCTTCCACCGTGCAAGAAGCGGGTGAGATCAAAGGAAGCTAACGACACGAACGGTGATTCGAGTACGGTCATGGTTAGGCCATGTAGTGAGGCCAGAGGTCACACTGGTTATCTAACATTTGCAAGACTCAGGTGCCTCTCATAA ATGAACATGGTCTTCTCCGCTTTATTTTCTTCCAGTACCAGTAAACCGCCGCCGCCAGCTTCCGACGATTGCGTTCCCTCTGTAGCAGCTAAACGCCAAACCAAACTTTCAATCTTTAGATCAAGGATGTTGCCAACTGATGACTTGAAGAAGATATCTTTCACTCATTCTATAAGGGATGGAGATTTAGTCATTGTTTATGAGAGACATGATGTCATGAAGGCTGTGAAAGTATGTGAAAATTCAACATTTCAGAATAGGTTTGAATCAGGGACTGGCAGTGGATCTTTGACGACGTCTTTAGCTAGGGCTGTAGCGCCTACCGGACATGTCTATACGTTTGATTTTCATGAACAGAGAGCTGCCTCGGCAAGAGAGGATTTTGAGAAGACTGGCTTGACCAGCTTAGTCACTGTGGGAGTTAGAGATGTTCAAGGTCAGGGCTTCCCTGAAGAGTTTGTTGGATTGGCAGATTCAGTTTTCTTGGATCTACCTCAACCTTGGTTGGCCATTCCTTCAGCTGAGAGAATGCTGAAACAAGACGGCGTATTATGCTCGTTCTCTCCATGTATCGAGCAAGTTCAACGGTCGGCCGAAACTCTACGATCTAAGTTTACAGATATAAGAACATTTGAGGTATTGCTTCGGACTTACGAGGTTCGAGAAGGTAAAACAGAGAGCAGCCAGGTTGAAGGAGGTGGTTCTGTCGAGCTTCCACCGTGCAAGAAGCGGGTGAGATCAAAGGAAGCTAACGACACGAACGGTGATTCGAGTACGGTCATGGTTAGGCCATGTAGTGAGGCCAGAGGTCACACTGGTTATCTAACATTTGCAAGACTCAGGTGCCTCTCATAA ATGAACATGGTCTTCTCCGCTTTATTTTCTTCCAGTACCAGTAAACCGCCGCCGCCAGCTTCCGACGATTGCGTTCCCTCTGTAGCAGCTAAACGCCAAACCAAACTTTCAATCTTTAGATCAAGGATGTTGCCAACTGATGACTTGAAGAAGATATCTTTCACTCATTCTATAAGGGATGGAGATTTAGTCATTGTTTATGAGAGACATGATGTCATGAAGGCTGTGAAAGTATGTGAAAATTCAACATTTCAGAATAGGTTTGAATCAGGGACTGGCAGTGGATCTTTGACGACGTCTTTAGCTAGGGCTGTAGCGCCTACCGGACATGTCTATACGTTTGATTTTCATGAACAGAGAGCTGCCTCGGCAAGAGAGGATTTTGAGAAGACTGGCTTGACCAGCTTAGTCACTGTGGGAGTTAGAGATGTTCAAGGTCAGGGCTTCCCTGAAGAGTTTGTTGGATTGGCAGATTCAGTTTTCTTGGATCTACCTCAACCTTGGTTGGCCATTCCTTCAGCTGAGAGAATGCTGAAACAAGACGGCGTATTATGCTCGTTCTCTCCATGTATCGAGCAAGTTCAACGGTCGGCCGAAACTCTACGATCTAAGTTTACAGATATAAGAACATTTGAGGTATTGCTTCGGACTTACGAGGTTCGAGAAGGTAAAACAGAGAGCAGCCAGGTTGAAGGAGGTGGTTCTGTCGAGCTTCCACCGTGCAAGAAGCGGGTGAGATCAAAGGAAGCTAACGACACGAACGGTGATTCGAGTACGGTCATGGTTAGGCCATGTAGTGAGGCCAGAGGTCACACTGGTTATCTAACATTTGCAAGACTCAGGTGCCTCTCATAA MNMVFSALFSSSTSKPPPPASDDCVPSVAAKRQTKLSIFRSRMLPTDDLKKISFTHSIRDGDLVIVYERHDVMKAVKVCENSTFQNRFESGTGSGSLTTSLARAVAPTGHVYTFDFHEQRAASAREDFEKTGLTSLVTVGVRDVQGQGFPEEFVGLADSVFLDLPQPWLAIPSAERMLKQDGVLCSFSPCIEQVQRSAETLRSKFTDIRTFEVLLRTYEVREGKTESSQVEGGGSVELPPCKKRVRSKEANDTNGDSSTVMVRPCSEARGHTGYLTFARLRCLS Homology
BLAST of Csor.00g213900 vs. ExPASy Swiss-Prot
Match: Q86JJ0 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a OS=Dictyostelium discoideum OX=44689 GN=trmt61a PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 7.0e-36 Identity = 90/211 (42.65%), Postives = 124/211 (58.77%), Query Frame = 0
BLAST of Csor.00g213900 vs. ExPASy Swiss-Prot
Match: Q80XC2 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Mus musculus OX=10090 GN=Trmt61a PE=1 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.5e-33 Identity = 94/239 (39.33%), Postives = 131/239 (54.81%), Query Frame = 0
BLAST of Csor.00g213900 vs. ExPASy Swiss-Prot
Match: Q96FX7 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens OX=9606 GN=TRMT61A PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.8e-32 Identity = 94/242 (38.84%), Postives = 130/242 (53.72%), Query Frame = 0
BLAST of Csor.00g213900 vs. ExPASy Swiss-Prot
Match: Q6AY46 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus OX=10116 GN=Trmt61a PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.8e-32 Identity = 91/239 (38.08%), Postives = 130/239 (54.39%), Query Frame = 0
BLAST of Csor.00g213900 vs. ExPASy Swiss-Prot
Match: A6H791 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Bos taurus OX=9913 GN=TRMT61A PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.2e-29 Identity = 83/192 (43.23%), Postives = 111/192 (57.81%), Query Frame = 0
BLAST of Csor.00g213900 vs. NCBI nr
Match: KAG6590082.1 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 563 bits (1450), Expect = 3.83e-202 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
BLAST of Csor.00g213900 vs. NCBI nr
Match: KAG7023752.1 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 452 bits (1164), Expect = 3.59e-158 Identity = 241/309 (77.99%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Csor.00g213900 vs. NCBI nr
Match: XP_022961161.1 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A isoform X2 [Cucurbita moschata] >XP_022961162.1 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A isoform X2 [Cucurbita moschata]) HSP 1 Score: 452 bits (1164), Expect = 3.59e-158 Identity = 241/309 (77.99%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Csor.00g213900 vs. NCBI nr
Match: XP_022987109.1 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 451 bits (1159), Expect = 2.07e-157 Identity = 240/309 (77.67%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Csor.00g213900 vs. NCBI nr
Match: XP_022961159.1 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A isoform X1 [Cucurbita moschata] >XP_022961160.1 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A isoform X1 [Cucurbita moschata]) HSP 1 Score: 451 bits (1160), Expect = 2.24e-157 Identity = 240/308 (77.92%), Postives = 240/308 (77.92%), Query Frame = 0
BLAST of Csor.00g213900 vs. ExPASy TrEMBL
Match: A0A6J1H9F4 (tRNA (adenine(58)-N(1))-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111461754 PE=3 SV=1) HSP 1 Score: 452 bits (1164), Expect = 1.74e-158 Identity = 241/309 (77.99%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Csor.00g213900 vs. ExPASy TrEMBL
Match: A0A6J1JHY4 (tRNA (adenine(58)-N(1))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111484759 PE=3 SV=1) HSP 1 Score: 451 bits (1159), Expect = 1.00e-157 Identity = 240/309 (77.67%), Postives = 241/309 (77.99%), Query Frame = 0
BLAST of Csor.00g213900 vs. ExPASy TrEMBL
Match: A0A6J1HBB8 (tRNA (adenine(58)-N(1))-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111461754 PE=3 SV=1) HSP 1 Score: 451 bits (1160), Expect = 1.08e-157 Identity = 240/308 (77.92%), Postives = 240/308 (77.92%), Query Frame = 0
BLAST of Csor.00g213900 vs. ExPASy TrEMBL
Match: A0A6J1J9F9 (tRNA (adenine(58)-N(1))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111484759 PE=3 SV=1) HSP 1 Score: 449 bits (1155), Expect = 6.25e-157 Identity = 239/308 (77.60%), Postives = 240/308 (77.92%), Query Frame = 0
BLAST of Csor.00g213900 vs. ExPASy TrEMBL
Match: A0A5A7TJ63 (tRNA (adenine(58)-N(1))-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00040 PE=4 SV=1) HSP 1 Score: 415 bits (1066), Expect = 1.08e-142 Identity = 221/317 (69.72%), Postives = 237/317 (74.76%), Query Frame = 0
BLAST of Csor.00g213900 vs. TAIR 10
Match: AT5G14600.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 320.5 bits (820), Expect = 1.4e-87 Identity = 180/319 (56.43%), Postives = 204/319 (63.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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