Csor.00g213400 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g213400
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	zinc finger CCCH domain-containing protein 14-like
Location	Csor_Chr03: 303092 .. 308537 (-)
RNA-Seq Expression	Csor.00g213400
Synteny	Csor.00g213400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTGCCTTCAATTCTAATGGTTCCTTTAAGAAGCATAAGCAAGGTTCGTTTCTTTTGTTTTGTTTTTTTTTTTGTTTTATTTTCTGTTTTTGGGATTGTGTTCGTTGTTCTGTTTGTTGGAGTGTTAGTTCGATGCTTTGTCTCGTTCGTTTGTACCACTAGTTTGAGCTTTATCTGGTTGCTTATATCTGGGAGGAGAGAACATTTATGTGCTTAGCTAGTGCTTTGCTTTGTTCGTTGTTGGGGGAGGATGGTTTTTTGGCCTCTGTTTGTTATTCGTTTCTTTTCTGAAGTTGGAACTTTTCGCTTTTACTGTCTCACTGGTTCTTCTTTTATTTGTTTCTACGGATTTTTGAGTTAGTGGCGCCACGTGTTCGCGCTCCGTGATCTACCCGTATGTATGCGTTTGATCCGATGTCATTTTACTATACTTCTTCAACTAGGGATAACTGGAATACTCCTTTAGTAAGTGCATCTGCTTTAAGTAATTGAAGACGGTTGTTGGTTGTAGGTTATGAGAGGGGTTAGATATAACTAGTGGTGTAATAGGAGGGTTAGTAATTGGACGACTCTTAGAATTGTGCCTGTTAGTGGTGAGATGTGGGACCATGTGAGGGTTTTAGTCTCCATTGTCATCCTTTAGCAAAGTGTGCGTAGGGTTCAGTATCGAATTACAAGTATGGTGGAGCGTGGAGCCTGCCCTTTTCTTGTTTTCCATCACTTCTGTGTTTTTCATCAACATTCTCAACAGACCATGGTTTGGTCTCTCTCCACTTTTAACACCTCAGAATCGATCATTATTGCTTTATCCAGTAGTATGTTGAGAATGTTGATGAAAAGCAAAGATTTGGGAAAGAATCTCTCTTGTTGAGTGCCTCTTATTTCAACTATTCTCCTTGGACTAGAATCTAAAATTGGTAATGCAGATTTGAATCCAATTTTTTTCCATTTATTGTGAACTTGAAATTGTCGTAAAAAAATTCCAATCAGTTTGATCCCTCCTTTTGTTTTATTTAATGTTCTGCCTTGATCCACTTGGCTACATAAGCCCCTACCCCCGCACAGGTTTAAGTCTCCAGTTTTTTGTTCTTTATTCTTGATTACAACTTTCAAGTCTTATGGTAGAACCCTTGGTTTTTAAAGCTCTAGGATTGTTGAAACTCAGAAGTACTGATCACCATCCATTAAAATCGCTAGTTACCCTGTCATTAGGTGACTAGCTCCTCAGCCTTCCAGCATATTTGAGTTGTATACACTTTGAAGGGAATATGGGTTGAATATGGAAAAGATCTATTTAAAAAATTATGACTTTAAGAACAATTCCTGAATATCTTGTTCATTTGCTGCAATATTTTTTCTTTGAGCGATGAGCGAGGGAAACAATTGTTTGCATCATATTTATTTATGGAAAAGGTACACTTTGGATCAAGAAAAAAAAAATTAAAATTGTTCTCGGAACAATTTTATTTTATCCTTAGATCAGTCATTAAGCTTGGAGTGGAGGGTTAAAATACTTCATCTACCATTGACAAAATTTGGATCTAGGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAATAAACTTTGTTTTGGTGTTGGGCCTTATTGTATATATAAACCTAGGTAACCCCACAATTCAACTGAAACAGTTGAAGTTACCAATCATATATTTAGATTGTTACCCTACAGCAACAGAAAGCTACAAATTATTGAGTAATTGTTTTAGTTGCCTAAATAATTTAAGTGTGAAGATGTATTAAATCATTAGAGTAAAAATCTTAACAAACTGTAACTGAGAAAGAATAATTAATGTTTTGCAACAGAACTGGAGTCCTTATCAACTGTAGGGGGCAAATCGAAGCCATGCACCAAGTTTTTCAGGTTCATATCTTACCTACCTAAATAAGTATTTAAGCTGCATATTATCTCTCCCTAATCATCTAAACTTGTTGTAAGAATTTAATTGATCATGAATTACAAGATAAAGCTGAGTAATTGCGCCTCTGAAAACTGGGAATACAGGTATAAATTATTACTCTAAGCCTTCAACCAAGTCAATAAAACACAAAACACAGAGGCTCTCTCTCTCTCTGTTTCATTTATATTTTGCACTGCACGTGGGATACCATCTCATTCTCATTGGTTACAAATTAGTTTGATCCGTTCTTTTTTATTTTATTTTTATTATTTTTATTTTTTTTATTTAAATTTTGGTTGATTATTATTCCCTTTTGGTCCAGTTCTATTTTACTAGCTTGCGTCCATCATTTATCTTTGTAATGAGGTTTTGAGCCCTAATTTTTTTTTTGTCTACACATCTCTTATCTGAATAGAGATGACTTATCTTCCTTTCCCTTATGAATCTCTAGTAGAGAGAAATATGGTCAGCGTCTAACCTTTAAGCACAAATTGTTTTTTAATAAAAGAAGAATAGAGGAAAAAAATCAATTTTGTACCCCTAAACTTTGAGGCTTGTATCAAATAAAACTCCAGAGTAATAATTGTATAAATTTGATTCCTAAACTTTCATAAGTGAATCAATGTAGACCCTATATTAGTGAGTTATAACAATTTTAACTTAGTTTCATTTCAAATCAACTCATAGTTGGGTAAATATAATTCTTCTTCCAAAAGTCTGCTAAAATAGTAGGAAAACGTATCACGTAATTCTTCCTTAATAAGTAAAGAAAAATAGAGGAAGAAGAAAAGATGGAACCACTCATAAATAGTGAGAGTGCTACTATCCATTTGATTCTTCTCCATTTGATTCTTCTCTATTAATGCATTAAAGGTCTTAAAATAGAATCCTAATGAAGGGTTTAAATTGATTCACTTGAAAGTTCAGATTTTCATTGATACAATTATTAGTTTGAGGTTTTAATTGATGCAACTCTAAAATTTGGAGGTGTAATTTGATTTTTATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTATTACAGTTGCCTTTGCATCGTTTTTCCTTCTAGCAGCTAATTTAACTAGAGCATGCCATTTGCTTCAATTTTTAGTACCTCTATTTAATATTCTTCAGTATATTGATGGCTTGTAGAAATATGGTTAGAAAGTATGGGTGGAGGGGTTGAGGCTTAAAAGTATTTTGAGATCTGTGTTCCAATTTGCCACATTGTATTCCGTCGATGTTTGAGTTGTTTGTTATCAGCTGTGAGTTTTCTAGTATTAATGGATCATGCTGATGGCTTGTCCTTATCTTTGTCTTTGTTGGCACTCCATGTCTTTCAATCTCTTTTTTTCGCTGCTATAAATCATTGTAAGCGAGCATCTTTATTCTTTTAAAAAGGACACAGGCCTCTATTTTTTCTTGTCCCAGTAACAATAGATTTTCTAATTGTTTGTGACGATCTACTAAGTGCCTATAGTTTTGAATTTCTTGAATGGATTAGACCACTCACCAAGATTTCAACTCATGTCTGAAATAGATTTTCTTGTAGGGCAATAATTAGCCATAAGAGCCTCCTATTCACTCTCCTGATTGCATTGTGTTTAATCTTTTATCAAGATGTGAAGATTTAGTTTGGGTTATTTGATTTGCTTAAGCTTCTCTTTGAGGTGTGGCAATTTGATTTGGTTACTTGATATGCTTTAAACGCTTGCCAACCTTATACTTGATACACGGGGTCCTACTTAAGATACTAGGTTGAACGTTTAAAAATAGTTTTCTGTTACCAAGTATAATTCTTTTTTTTTTTAATATGGATAACCTGTTTGGCAGGATATATTTTCATCAGAATAAATAACGGTAGAAACTAGAAATGAAAAAGAACAGAAAATAGTTTCATACTATGGATTTAGAACATAGTTTCTAAAGTAATATGTAGTCTAATGTTGGGACTGTTTGGAAGCTGTTTCTAAAAAATGAAGTCTTGTTTCCAAAAATGAAAAGAATTAACTGTGGTTTTAAGTTTCAAACGTTGGTGGTGGTGGGTTTTTTACTTTAATTTCTGCGCTAATTCTTAAAAATAATTTTGATCTTATAATAAAATAAACATATATATTTTGGTAGCACGGTGAGGGAGAAAACTGTTCTAAAAAGGATGGGACCTTTTAGCACTAACAGGGAGTTGGGGCTTGATGGGAGGTTGGTTGACAGATTTGGTACTTTTCACCCCAAAGGGGAGAAAAACTGCTAAAGGTTGCCAAGTTAATTGCAAAAGACACAAAAGGTCTTTGTGAGGAAGCTCGAGTATTCTTTCTATTTGCAACTTCGTTTCTAGTGGGGCTGCACTTAACAAAAAGGCTGTTTATAGTTTCTTTTTCCAGTAGAGCAGATCTTTGTTTTATTTGTTTCGTTCTAAAGTTTCTTTCTAGACTGAAGAAAGCCATTTTTCAAAACTACCCGAAATATCTCAGAAATTTTTTATGCTATTTCTCAATAACATACAACTTCTGGAGGAGTTTGGGCATTTAGAAAGAGGAAAACATGATATTACTTTATGTCAAAAGATATGCATGCGGTTCTTGCGGAGATTGATTTCTCCTCTTTGTATGCTTGTGTTTGATTTCTCCGAGTGAATACTAATCTTTAGATTTATGAATTTCCGAGGGATTCTGGTTTGGAGGTTTGGTTGATCTTACAGTTGTGTTATTCATCTTTTTGGATTTCAGCACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTTTTGCATTACGTTCCTGGTGGTTATAATGCTGTTGCTCAAATGATGAATCTTGCTCCTGTTGGTTCTCAACCATCCAGAAATATGGCTGCCCCTCCTGTCTCCAACGGCGGGTCCTCTGCTCCGTCCCAAATCAAAACTCGCATGTGCAACAAGTTCAACAGCGCTGAAGGCTGCAAGTTCGGTGATAAATGTAACTTTGCCCATGGAGAGTGGGAACTCGGGAGGCCTACCCCTCCATCTCACGATAATCCCCGTGGTATGGGAGGACATATGGTTGGTCGTATGGGTGGGCGAATGGACCTGCCACCACCAGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACTGCGAAGATTAGTATAGATGCATCCCTCGCCGGAGCGATCATTGGGAAGGGTGGGATTAACTCGAAACAGATTTGTCGCCAAACGGGTGCCAAACTCTCCATCAGGGACCATGAATCAGACCCAAATCTCAGGAACATAGAACTGGAGGGCACTTTTGAGCAAATTAACGAAGCAAGTGCAATGGTGAGGGAGCTCATTATCACAGTTTCAATGTCAGGACCCGGCAAAGGCCATGGTGCGATGGGAGGAGGAGGCCCTGCTCCTTCAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGAGCTGCCGAGTTACGTAAGTCTGGAGTATGA

mRNA sequence

ATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTGCCTTCAATTCTAATGGTTCCTTTAAGAAGCATAAGCAAGAACTGGAGTCCTTATCAACTGTAGGGGGCAAATCGAAGCCATGCACCAAGTTTTTCAGCACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTTTTGCATTACGTTCCTGGTGGTTATAATGCTGTTGCTCAAATGATGAATCTTGCTCCTGTTGGTTCTCAACCATCCAGAAATATGGCTGCCCCTCCTGTCTCCAACGGCGGGTCCTCTGCTCCGTCCCAAATCAAAACTCGCATGTGCAACAAGTTCAACAGCGCTGAAGGCTGCAAGTTCGGTGATAAATGTAACTTTGCCCATGGAGAGTGGGAACTCGGGAGGCCTACCCCTCCATCTCACGATAATCCCCGTGGTATGGGAGGACATATGGTTGGTCGTATGGGTGGGCGAATGGACCTGCCACCACCAGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACTGCGAAGATTAGTATAGATGCATCCCTCGCCGGAGCGATCATTGGGAAGGGTGGGATTAACTCGAAACAGATTTGTCGCCAAACGGGTGCCAAACTCTCCATCAGGGACCATGAATCAGACCCAAATCTCAGGAACATAGAACTGGAGGGCACTTTTGAGCAAATTAACGAAGCAAGTGCAATGGTGAGGGAGCTCATTATCACAGTTTCAATGTCAGGACCCGGCAAAGGCCATGGTGCGATGGGAGGAGGAGGCCCTGCTCCTTCAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGAGCTGCCGAGTTACGTAAGTCTGGAGTATGA

Coding sequence (CDS)

ATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTGCCTTCAATTCTAATGGTTCCTTTAAGAAGCATAAGCAAGAACTGGAGTCCTTATCAACTGTAGGGGGCAAATCGAAGCCATGCACCAAGTTTTTCAGCACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTTTTGCATTACGTTCCTGGTGGTTATAATGCTGTTGCTCAAATGATGAATCTTGCTCCTGTTGGTTCTCAACCATCCAGAAATATGGCTGCCCCTCCTGTCTCCAACGGCGGGTCCTCTGCTCCGTCCCAAATCAAAACTCGCATGTGCAACAAGTTCAACAGCGCTGAAGGCTGCAAGTTCGGTGATAAATGTAACTTTGCCCATGGAGAGTGGGAACTCGGGAGGCCTACCCCTCCATCTCACGATAATCCCCGTGGTATGGGAGGACATATGGTTGGTCGTATGGGTGGGCGAATGGACCTGCCACCACCAGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACTGCGAAGATTAGTATAGATGCATCCCTCGCCGGAGCGATCATTGGGAAGGGTGGGATTAACTCGAAACAGATTTGTCGCCAAACGGGTGCCAAACTCTCCATCAGGGACCATGAATCAGACCCAAATCTCAGGAACATAGAACTGGAGGGCACTTTTGAGCAAATTAACGAAGCAAGTGCAATGGTGAGGGAGCTCATTATCACAGTTTCAATGTCAGGACCCGGCAAAGGCCATGGTGCGATGGGAGGAGGAGGCCCTGCTCCTTCAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGAGCTGCCGAGTTACGTAAGTCTGGAGTATGA

Protein sequence

MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKCNFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV

Homology

[Close]

BLAST of Csor.00g213400 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.7e-88
Identity = 182/304 (59.87%), Postives = 214/304 (70.39%), Query Frame = 0


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFLHYVPG 63
           RKRG+P+ A   NG+  K  +E ES  T VG KSKPCTKFFST+GCPFGE CHFLH+ PG
Sbjct: 6   RKRGKPDGA---NGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 65

Query: 64  GYNAVAQMMNL-APVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKCN 123
           GY AVA+M NL  P  + P   M        G   P+ +KTR+CNK+N+AEGCK+GDKC+
Sbjct: 66  GYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDGPPTPT-VKTRLCNKYNTAEGCKWGDKCH 125

Query: 124 FAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPA------ASFGASATAKIS 183
           FAHGE ELG+P       P  MG    G        PPP P+      ASFGASATAKIS
Sbjct: 126 FAHGERELGKPMLMDSSMPPPMGPRPTGHFA-----PPPMPSPAMSTPASFGASATAKIS 185

Query: 184 IDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRE 243
           +DASLAG IIG+GG+N+KQI R TGAKL+IRDHESD NL+NIELEGTF+QI  ASAMVRE
Sbjct: 186 VDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAMVRE 245

Query: 244 LIITVSMSGPGKGHGAMG----GGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAE 296
           LI+++    P +G   +G    GGGP   GSN+KTKLC+NF KGSCTFG+RCHFAHG  E
Sbjct: 246 LIVSIGGGAPPQGKKPVGGSHRGGGP---GSNFKTKLCENFTKGSCTFGDRCHFAHGENE 297

[Close]

BLAST of Csor.00g213400 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 6.4e-88
Identity = 185/304 (60.86%), Postives = 214/304 (70.39%), Query Frame = 0


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFLHYVPG 63
           RKR RP+ A N   +  K  +E ES  T +  K KPCTKFFST GCPFGE CHF H+VPG
Sbjct: 8   RKRSRPDTA-NGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPG 67

Query: 64  GYNAVAQMMNLA-PVGSQPSRNMAAPPVSNGGSSAP-SQIKTRMCNKFNSAEGCKFGDKC 123
           GY AVA+ +NL  P    P+R  A    + GG+S P S  KTRMC K+N+AEGCKFGDKC
Sbjct: 68  GYQAVAKTLNLGNPAVPAPAR--APMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKC 127

Query: 124 NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPG----PAASFGASATAKISI 183
           +FAHGE ELG+P   SH++   M   M GR GGR + PPP     PA +FGASATAKIS+
Sbjct: 128 HFAHGERELGKPAYMSHES--AMAPPMGGRYGGRPEPPPPAAMGPPAGNFGASATAKISV 187

Query: 184 DASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVREL 243
           DASLAG IIGKGG+N+KQICR TG KLSIRDHESD NL+NIELEG F+QI +AS MV EL
Sbjct: 188 DASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGEL 247

Query: 244 IITVSMSGPG-KGHGAMGGGGPAPSG-----SNYKTKLCDNFAKGSCTFGERCHFAHGAA 295
           I T+S S P  K  G+  G  PA  G     SNYKTKLC+NF KG+CTFG+RCHFAHG  
Sbjct: 248 IATISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFVKGTCTFGDRCHFAHGEN 306

[Close]

BLAST of Csor.00g213400 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 8.3e-80
Identity = 169/300 (56.33%), Postives = 203/300 (67.67%), Query Frame = 0


Query: 5   KRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYVPGGY 64
           KR  PE    +NG+ K+ +    S   VG K KPCTKFFST+GCPFG SCHFLH  PGGY
Sbjct: 7   KRAAPE---GTNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGY 66

Query: 65  NAVAQMMNL--APVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKCNF 124
            A A+M +     V + P R    P   NG  +  S +KTRMCNK+N+AEGCK+G KC+F
Sbjct: 67  QAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPT--SSVKTRMCNKYNTAEGCKWGSKCHF 126

Query: 125 AHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPP-PG----PAASFGASATAKISID 184
           AHGE ELG+P    +  P  MG           + PP PG    P ++FGASATAKIS+D
Sbjct: 127 AHGERELGKPMLLDNSMPHPMGSM-------PFEAPPMPGPDIVPPSTFGASATAKISVD 186

Query: 185 ASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELI 244
           ASLAG IIGKGG N+K I R TGAKL+IRD+ES+PNL+NIELEGTF+QI  ASAMV ELI
Sbjct: 187 ASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELI 246

Query: 245 ITVSMSGP---GKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK 295
           + +S + P     G G+  GG     GSN+KTKLC+NF KGSCTFG+RCHFAHG +ELRK
Sbjct: 247 VRISGNAPPAKNPGRGSHAGG----PGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRK 290

[Close]

BLAST of Csor.00g213400 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.1e-75
Identity = 168/300 (56.00%), Postives = 192/300 (64.00%), Query Frame = 0


Query: 1   MDMRKRGRPEAA--FNSNGSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEAA   NSNG FK+ KQE+ES+ST +G KSKPCTKFFST+GCPFG++CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFG 120
           HYVPGGYNA AQM NL P  SQ SRNM        GS  P                    
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNMQ-------GSGGPG------------------- 120

Query: 121 DKCNFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISID 180
                                          GR  GR D P  GP + FGAS T+KIS+D
Sbjct: 121 -------------------------------GRFSGRGD-PGSGPVSIFGAS-TSKISVD 180

Query: 181 ASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELI 240
           ASLAGAIIGKGGI+SKQICR+TGAKLSI+DHE DPNL+ IELEGTFEQIN AS MVRELI
Sbjct: 181 ASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELI 239

Query: 241 ITVSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 298
               +    K  G  G  G    GSNYKTK+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 241 --GRLGSVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]

BLAST of Csor.00g213400 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.2e-74
Identity = 166/307 (54.07%), Postives = 198/307 (64.50%), Query Frame = 0


Query: 1   MDMRKRGRPEA-AFNSN-GSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEA +FNSN G +KK KQE+ES ST +G KSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFG 120
           HYVPGGYNAV+QM N+ P   Q SRNM      NGG             +F+        
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNMQGS--GNGG-------------RFSG------- 120

Query: 121 DKCNFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISID 180
                                  RG  G              PG  ++FG SATA+ S+D
Sbjct: 121 -----------------------RGESG--------------PGHVSNFGDSATARFSVD 180

Query: 181 ASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELI 240
           ASLAGAIIGKGG++SKQICRQTG KLSI+DHE DPNL+NI LEGT EQI+EASAMV++LI
Sbjct: 181 ASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLI 240

Query: 241 ITVSMSGPGKGHGAMGGGG-------PAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAA 298
             ++ +      G +GGGG       P P GSN+KTK+C+ F+KG+CTFG+RCHFAHG A
Sbjct: 241 GRLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKICERFSKGNCTFGDRCHFAHGEA 247

[Close]

BLAST of Csor.00g213400 vs. NCBI nr
Match: XP_022928715.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata] >KAG6603175.1 Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033487.1 Zinc finger CCCH domain-containing protein 14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 606 bits (1563), Expect = 6.23e-219
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASL 180
           NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASL
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASL 180

Query: 181 AGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITV 240
           AGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITV
Sbjct: 181 AGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITV 240

Query: 241 SMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           SMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 SMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297

[Close]

BLAST of Csor.00g213400 vs. NCBI nr
Match: XP_023545090.1 (zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 603 bits (1554), Expect = 1.47e-217
Identity = 295/297 (99.33%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPV+NGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVTNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASL 180
           NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASL
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASL 180

Query: 181 AGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITV 240
           AGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITV
Sbjct: 181 AGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITV 240

Query: 241 SMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           SMSGPGK HGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 SMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297

[Close]

BLAST of Csor.00g213400 vs. NCBI nr
Match: XP_022967865.1 (zinc finger CCCH domain-containing protein 31 [Cucurbita maxima])

HSP 1 Score: 597 bits (1538), Expect = 4.19e-215
Identity = 295/298 (98.99%), Postives = 296/298 (99.33%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGG-HMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180
           NFAHGEWELGRPTPPSHDNPRGMGG HMVGRMGGRMDLPPPGPAASFGASATAKISIDAS
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180

Query: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIIT 240
           LAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAMVRELIIT
Sbjct: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT 240

Query: 241 VSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           VSMSGPGK HGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 298

[Close]

BLAST of Csor.00g213400 vs. NCBI nr
Match: XP_008442098.1 (PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo])

HSP 1 Score: 565 bits (1456), Expect = 1.66e-202
Identity = 282/305 (92.46%), Postives = 289/305 (94.75%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP V+NGGSSAPSQ+KTRMCNKFN+AEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPTPPSHDNPRGMGG-------HMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRP PPSHDNPR MGG       HMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 297
           VRELIITVSM+GPGK  G MGGG PAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 VRELIITVSMAGPGKASGGMGGG-PAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

[Close]

BLAST of Csor.00g213400 vs. NCBI nr
Match: XP_038882544.1 (zinc finger CCCH domain-containing protein 31 [Benincasa hispida])

HSP 1 Score: 562 bits (1449), Expect = 1.73e-201
Identity = 277/302 (91.72%), Postives = 287/302 (95.03%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRP+AAFN+NG+FKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPDAAFNTNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYN VAQMMNLAPVGSQPSRNM APPV+NGGSSAPSQ+K+RMCNK+N+AEGCKFGDKC
Sbjct: 61  PGGYNVVAQMMNLAPVGSQPSRNMPAPPVTNGGSSAPSQVKSRMCNKYNTAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGG-----HMVGRMGGRMDLPPPGPAASFGASATAKIS 180
           NFAHGEWELGRP PPSHDNPR MGG     HMVGRMGGRMDLPPPGPAASFGASATAKIS
Sbjct: 121 NFAHGEWELGRPNPPSHDNPRAMGGGGGGGHMVGRMGGRMDLPPPGPAASFGASATAKIS 180

Query: 181 IDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRE 240
           IDASLAGAIIGKGGINSKQICRQTGAKLSIRDHE DPNLRNIELEGTFEQINEASAMVRE
Sbjct: 181 IDASLAGAIIGKGGINSKQICRQTGAKLSIRDHELDPNLRNIELEGTFEQINEASAMVRE 240

Query: 241 LIITVSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS 297
           LIITVSM+GPGK  G MGGG PAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS
Sbjct: 241 LIITVSMTGPGKAPGGMGGG-PAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS 300

[Close]

BLAST of Csor.00g213400 vs. ExPASy TrEMBL
Match: A0A6J1ESD4 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111435541 PE=4 SV=1)

HSP 1 Score: 606 bits (1563), Expect = 3.02e-219
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASL 180
           NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASL
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASL 180

Query: 181 AGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITV 240
           AGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITV
Sbjct: 181 AGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITV 240

Query: 241 SMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           SMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 SMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297

[Close]

BLAST of Csor.00g213400 vs. ExPASy TrEMBL
Match: A0A6J1HVM0 (zinc finger CCCH domain-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111467244 PE=4 SV=1)

HSP 1 Score: 597 bits (1538), Expect = 2.03e-215
Identity = 295/298 (98.99%), Postives = 296/298 (99.33%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGG-HMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180
           NFAHGEWELGRPTPPSHDNPRGMGG HMVGRMGGRMDLPPPGPAASFGASATAKISIDAS
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180

Query: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIIT 240
           LAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAMVRELIIT
Sbjct: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT 240

Query: 241 VSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           VSMSGPGK HGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 298

[Close]

BLAST of Csor.00g213400 vs. ExPASy TrEMBL
Match: A0A1S3B4W9 (zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LOC103486060 PE=4 SV=1)

HSP 1 Score: 565 bits (1456), Expect = 8.02e-203
Identity = 282/305 (92.46%), Postives = 289/305 (94.75%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP V+NGGSSAPSQ+KTRMCNKFN+AEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPTPPSHDNPRGMGG-------HMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRP PPSHDNPR MGG       HMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 297
           VRELIITVSM+GPGK  G MGGG PAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 VRELIITVSMAGPGKASGGMGGG-PAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

[Close]

BLAST of Csor.00g213400 vs. ExPASy TrEMBL
Match: A0A0A0KZ79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1)

HSP 1 Score: 561 bits (1447), Expect = 1.96e-201
Identity = 280/306 (91.50%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP V+NGG SAPSQ+KTRMCNK+N+AEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPTPPSHDNPRGMGG--------HMVGRMGGRMDLPPPGPAASFGASAT 180
           CNFAHGEWELGRP PPSHDNPR MGG        HMVGRMGGRMDLPPPGPAASFGASAT
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180

Query: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240
           AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA
Sbjct: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240

Query: 241 MVRELIITVSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAE 297
           MVRELIITVSM+GPGK  G MGGG PAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAE
Sbjct: 241 MVRELIITVSMAGPGKASGGMGGG-PAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAE 300

[Close]

BLAST of Csor.00g213400 vs. ExPASy TrEMBL
Match: A0A6J1EBA5 (zinc finger CCCH domain-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111432553 PE=4 SV=1)

HSP 1 Score: 546 bits (1406), Expect = 2.31e-195
Identity = 275/298 (92.28%), Postives = 284/298 (95.30%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKR RPE+AFNSNG+FKKHKQELE LSTVG KSKPCTKFFSTAGCPFGESCHFLH+V
Sbjct: 1   MDMRKR-RPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120
           PGGYN VAQMMNL PVGSQPSRNMAAPP V+NGGSSAPSQ+KTRMCNK+N+AEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180
           CNFAHGEWELGRP  PSHDNPR MGGHMVGRMGGRMDLP PGPAASFGASATAKISIDAS
Sbjct: 121 CNFAHGEWELGRP--PSHDNPRAMGGHMVGRMGGRMDLPQPGPAASFGASATAKISIDAS 180

Query: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIIT 240
           LAGAIIGKGGINSKQICRQTGAKLSIRDHESD NLRNIELEGTFEQINEASAMVRELIIT
Sbjct: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELIIT 240

Query: 241 VSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           VSM+GPGK  GAMGGG PAPSGSNYKTK+CDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSMAGPGKAPGAMGGG-PAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 294

[Close]

BLAST of Csor.00g213400 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 283.9 bits (725), Expect = 1.5e-76
Identity = 168/300 (56.00%), Postives = 192/300 (64.00%), Query Frame = 0


Query: 1   MDMRKRGRPEAA--FNSNGSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEAA   NSNG FK+ KQE+ES+ST +G KSKPCTKFFST+GCPFG++CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFG 120
           HYVPGGYNA AQM NL P  SQ SRNM        GS  P                    
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNMQ-------GSGGPG------------------- 120

Query: 121 DKCNFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISID 180
                                          GR  GR D P  GP + FGAS T+KIS+D
Sbjct: 121 -------------------------------GRFSGRGD-PGSGPVSIFGAS-TSKISVD 180

Query: 181 ASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELI 240
           ASLAGAIIGKGGI+SKQICR+TGAKLSI+DHE DPNL+ IELEGTFEQIN AS MVRELI
Sbjct: 181 ASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELI 239

Query: 241 ITVSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 298
               +    K  G  G  G    GSNYKTK+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 241 --GRLGSVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]

BLAST of Csor.00g213400 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 279.3 bits (713), Expect = 3.7e-75
Identity = 166/307 (54.07%), Postives = 198/307 (64.50%), Query Frame = 0


Query: 1   MDMRKRGRPEA-AFNSN-GSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEA +FNSN G +KK KQE+ES ST +G KSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFG 120
           HYVPGGYNAV+QM N+ P   Q SRNM      NGG             +F+        
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNMQGS--GNGG-------------RFSG------- 120

Query: 121 DKCNFAHGEWELGRPTPPSHDNPRGMGGHMVGRMGGRMDLPPPGPAASFGASATAKISID 180
                                  RG  G              PG  ++FG SATA+ S+D
Sbjct: 121 -----------------------RGESG--------------PGHVSNFGDSATARFSVD 180

Query: 181 ASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELI 240
           ASLAGAIIGKGG++SKQICRQTG KLSI+DHE DPNL+NI LEGT EQI+EASAMV++LI
Sbjct: 181 ASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLI 240

Query: 241 ITVSMSGPGKGHGAMGGGG-------PAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAA 298
             ++ +      G +GGGG       P P GSN+KTK+C+ F+KG+CTFG+RCHFAHG A
Sbjct: 241 GRLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKICERFSKGNCTFGDRCHFAHGEA 247

[Close]

BLAST of Csor.00g213400 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 65.9 bits (159), Expect = 6.4e-11
Identity = 43/119 (36.13%), Postives = 53/119 (44.54%), Query Frame = 0


Query: 35  KSKPCTKFFSTAGCPFGESCHFLH-YVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGG 94
           K + C KF++  GCP+GESC FLH        +VA  +     GS          V  GG
Sbjct: 174 KGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGG 233

Query: 95  SSA---------------------PSQIKTRMCNKFNSAEGCKFGDKCNFAHGEWELGR 132
           SS+                     PS  KTR+CNK+     C FG KC+FAHG  EL R
Sbjct: 234 SSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292

[Close]

BLAST of Csor.00g213400 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-08
Identity = 47/147 (31.97%), Postives = 67/147 (45.58%), Query Frame = 0


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLH----- 63
           R+R RP  A   N +++  ++ +        + K C KF     CP+G+ C+F+H     
Sbjct: 161 RERERPSLAPVVNNNWEDDQKIIL-------RMKLCRKFCFGEECPYGDRCNFIHEDLSK 220

Query: 64  ------------YVPGGYNAVAQ----MMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKT 123
                        +  G  A  Q      NL  V  Q S  + A P++NGG       KT
Sbjct: 221 FREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPA-PMNNGGVVKTVYWKT 280

Query: 124 RMCNKFNSAEGCKFGDKCNFAHGEWEL 130
           R+C KF+    C FGDKC+FAHG+ EL
Sbjct: 281 RLCMKFDITGQCPFGDKCHFAHGQAEL 299

[Close]

BLAST of Csor.00g213400 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 52.8 bits (125), Expect = 5.6e-07
Identity = 45/129 (34.88%), Postives = 58/129 (44.96%), Query Frame = 0


Query: 12  AFNSNGSFKKHKQELESLSTVGGKS----KPCTKFFSTAGCPF-GESCHFLHYVPGGYNA 71
           A NS+G+    K+   S S+  GKS    K C K F    CP+   SCHF H        
Sbjct: 46  AINSDGAESPSKKTRSSSSSEIGKSFFKTKLCFK-FRAGTCPYSASSCHFAHSAEELRLP 105

Query: 72  VAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQI------KTRMCNKFNSAEGCKFGDKC 130
                N     ++ SRN  +  VS G     +Q       KTR+CNK+ +   C FG  C
Sbjct: 106 PPPPPNWQETVTEASRNRESFAVSLGPRGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHC 165

The following BLAST results are available for this feature:

BLAST of Csor.00g213400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7F8R0	3.7e-88	59.87	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q7XPK1	6.4e-88	60.86	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	8.3e-80	56.33	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FG30	2.1e-75	56.00	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9C7C3	5.2e-74	54.07	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Csor.00g213400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928715.1	6.23e-219	100.00	zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata] >KAG6603...	[more]
XP_023545090.1	1.47e-217	99.33	zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967865.1	4.19e-215	98.99	zinc finger CCCH domain-containing protein 31 [Cucurbita maxima]	[more]
XP_008442098.1	1.66e-202	92.46	PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo]	[more]
XP_038882544.1	1.73e-201	91.72	zinc finger CCCH domain-containing protein 31 [Benincasa hispida]	[more]

BLAST of Csor.00g213400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESD4	3.02e-219	100.00	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1HVM0	2.03e-215	98.99	zinc finger CCCH domain-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A1S3B4W9	8.02e-203	92.46	zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KZ79	1.96e-201	91.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1	[more]
A0A6J1EBA5	2.31e-195	92.28	zinc finger CCCH domain-containing protein 31-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Csor.00g213400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06770.1	1.5e-76	56.00	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G12130.1	3.7e-75	54.07	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT1G32360.1	6.4e-11	36.13	Zinc finger (CCCH-type) family protein	[more]
AT3G19360.1	1.3e-08	31.97	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	5.6e-07	34.88	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 168..238 e-value: 7.3E-13 score: 58.7
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 99..126 e-value: 0.02 score: 24.1 coord: 35..60 e-value: 1.1 score: 16.1 coord: 263..289 e-value: 6.0E-8 score: 42.4
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 101..126 e-value: 1.6E-5 score: 24.6 coord: 35..58 e-value: 3.0E-4 score: 20.6 coord: 264..288 e-value: 1.3E-9 score: 37.8
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 99..127 score: 13.516174
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 263..290 score: 16.558243
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 33..61 score: 12.380093
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 165..260 e-value: 4.8E-16 score: 60.4
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 158..240
None	No IPR available	GENE3D	4.10.1000.10		coord: 94..131 e-value: 3.9E-11 score: 44.1 coord: 261..295 e-value: 2.9E-14 score: 54.1
None	No IPR available	PANTHER	PTHR10288:SF273	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 9..296
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 9..296
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 169..233 score: 14.738799
None	No IPR available	CDD	cd00105	KH-I	coord: 171..233 e-value: 1.3195E-15 score: 67.9703
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 172..235 e-value: 4.3E-12 score: 45.7
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 34..59
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 262..293
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 98..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g213400.m01	Csor.00g213400.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding