
Csor.00g211850 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCTGGAGCGGGCAGTTTCTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGTATGTCGTTTCTCTCCTCTTCCTTTAACTTTACCGCTTTGATTCTGATTATTAGAGAGGAGGGATCAGTTTTTTTTGTAAAGGGTCGACCTTGCTAGGCTGACAAGAAAACTTACGAACACAATTTCTCTATTAACACCAATATCATCTACCCCATCTCCCCCGCAAGCCCAAGATGATGTTGTAAAGTCATTTAGCTTGAGGAATAGACAAATGTTTAGCGAGCAAATTAGGTGGAAGGAATAATCTGAAACCCCAACTGCTTTGCCAGTATCTTCTCATGAATGAGCTCTATAGGCTTCATTTGAGAAGGAAATTAAATGCTGGGTTTTGTGCAAAGACTCCTGTCCCAATTGTATCATACCGCAACACAGAATAAGAGGACCCATGTGCTTTGAAGAAAGATTCCAAACACCCCAGTTGTAGACTGAGCCAAGTATTCTGATACTGTTCTAGGCCGTGCCATCAGTTTGTTGTGGCAAGAGCTCCTGGTTTGGATGTTGGAGAACTGAGGCCTGGTCATTGTTAGGTACTTAGCCAGTAGCCCAATCAACCATAAGCTTGTTTTTATTAGTGGATCTTGAGTATAAATGGTTTGAGAAAGATAAAGAACATCCATCACAGTAATGTAGTTTAAAACCAAGAATACTAGTAGCATACTGATACAAGAATTTGGAGAGCTATAGTCTGCTCAACTATGAAATGATGACTTTATTAATTGAAATTTCATTAACATGCGCTAAAAGAATAATAGAAGTATGACAGTACAAAGCATTGTTTGGCTTTCACATAACACGTGCAATGTACCTGTCAAGACTACAAGACCAGCTAGTTGTCTTGTTTCATATTAGCAATTTAGTCCATCATTTAAAAGTAAAGAAGTCTCTGATGGAGAGAGGAATGAAGCATTCCTTATAAGGGTGTGAAAATCTCTTTCTAACATACGCGTTTTAAAATCTTGAGGGGAAAGCCCAAAAAAGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACCACCTCAATACTCGGGGGTTTCTTTATATAGTTCAATGATTAGTTTTCAATTGAAGGTACTTCCAAAATCATAACAAAAGCATTTACCCTGCACAAGACCACCTGAGAGATCAGACATTATGGATGTGCGCAAACATCCACTTGCTCACAGAGGTGCTATATGTTTGTAACTAAGGATTTCTATATAAGACACAAGATTAACCTTCATCTCCAGAACCAGAATTCAAAGATTGGCCTGAAATCTTTGTACTGTTCCTAGTAGAAAACCTTCAAGATCAAGCGATTTCACTGTTTAAAGCCCAAGACTAAAAGAAGTGTAATTTGACCAGTCAAGCATGTCTGTAATATACAATGATCTTCTATTGAGTAGAGGGGGATGGAGAAACAAGCATGGATATCTTGTATAATGTATGGACTGGCTAGATCAAGAACCCATTGACATTAGTCTATCACTCTAATACCCTTAAAGAAGATCTAGAGAAAACTATACAAAAATACCGTGAGAGTGATGGATGGGAAGGGGAATATGGTTAGGGTAAGGAAAGGATTGTAAGGCAGCAGAAAAAATGATTGGCTAATCATTGAGAAAAGTTCGAGGACGATTGGATTTAGGCGAGAAAGACGAGACTTCCATACACCGACCGTGGTTTTCTTTCCCCACACAATTCAAACTATTTTCTGATTGCTATCAAGCGCTCAAGTGCAAAATTTTAACTTCATTCATTGGTTTCATTTGCAGGCCTCTGGTTAGCCTTGTTTATCCTCTGTAAGTCGTTCGCTTCTCGATCTAATTTTCTATCCGTCTCATTAATGATACCTTTCGACAGTCAAAATCTCGAAATTGTAGTGTAATATTTGCTATTTGGCAGATATGCGTCGGTTAGAGCCATTGAAACAAAGTCTCATGTGGACGATCAGCAGTGGCTTACCTACTGGATCCTATATTCTATGCTCACCCTGTTCGAGCTTACATTTTCCAAAGTTCTCGAATGGTAAATCTTGAATAGAGCTTTTGCACATTTTCGTTAATCTTTTGGTCCAAGTCTGAAAAGCCACTGATGACTTTACATCTTTACAATAGGATCCCTATATGGCCTTATGCAAGGTTGATTTTTTCATGCTGGTTGGTCATTCCATACTTTAGTGGTGCTGCATATGTGTACGACCACTTCGTCAGGCCTCTATTCATCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGAGTTCTTCAGCAAGCCCGACGACATCCTAACCGCTGCAGAGAAGTACATCGCCGAAAATGGTACCGAAGACCTCCAAAATGTCATCAACAGGGTATAATACACTCTCACTCAACTCTCTACTGGTTGCTTTAAGCCACAAAATATGATTTGTTTTCGTTTCGTTTCGTTTCTGTAGGCCGATAAGGCTCATTCGAGTAACCGTTACATGAGCTATACCGAAGATCACGCCTACGAGCATTGGCACTGA ATGGGATCTGGAGCGGGCAGTTTCTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGCCTCTGGTTAGCCTTGTTTATCCTCTATATGCGTCGGTTAGAGCCATTGAAACAAAGTCTCATGTGGACGATCAGCAGTGGCTTACCTACTGGATCCTATATTCTATGCTCACCCTGTTCGAGCTTACATTTTCCAAAGTTCTCGAATGGATCCCTATATGGCCTTATGCAAGGTTGATTTTTTCATGCTGGTTGGTCATTCCATACTTTAGTGGTGCTGCATATGTGTACGACCACTTCGTCAGGCCTCTATTCATCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGAGTTCTTCAGCAAGCCCGACGACATCCTAACCGCTGCAGAGAAGTACATCGCCGAAAATGGTACCGAAGACCTCCAAAATGTCATCAACAGGGCCGATAAGGCTCATTCGAGTAACCGTTACATGAGCTATACCGAAGATCACGCCTACGAGCATTGGCACTGA ATGGGATCTGGAGCGGGCAGTTTCTTCAAGGTCATCCTCAAAAACTTCGATGTTCTTGCCGGGCCTCTGGTTAGCCTTGTTTATCCTCTATATGCGTCGGTTAGAGCCATTGAAACAAAGTCTCATGTGGACGATCAGCAGTGGCTTACCTACTGGATCCTATATTCTATGCTCACCCTGTTCGAGCTTACATTTTCCAAAGTTCTCGAATGGATCCCTATATGGCCTTATGCAAGGTTGATTTTTTCATGCTGGTTGGTCATTCCATACTTTAGTGGTGCTGCATATGTGTACGACCACTTCGTCAGGCCTCTATTCATCAACAAACAGACAGTTAACATTTGGTATGTTCCAAAGATGAAGGAGTTCTTCAGCAAGCCCGACGACATCCTAACCGCTGCAGAGAAGTACATCGCCGAAAATGGTACCGAAGACCTCCAAAATGTCATCAACAGGGCCGATAAGGCTCATTCGAGTAACCGTTACATGAGCTATACCGAAGATCACGCCTACGAGCATTGGCACTGA MGSGAGSFFKVILKNFDVLAGPLVSLVYPLYASVRAIETKSHVDDQQWLTYWILYSMLTLFELTFSKVLEWIPIWPYARLIFSCWLVIPYFSGAAYVYDHFVRPLFINKQTVNIWYVPKMKEFFSKPDDILTAAEKYIAENGTEDLQNVINRADKAHSSNRYMSYTEDHAYEHWH Homology
BLAST of Csor.00g211850 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 1.6e-67 Identity = 115/167 (68.86%), Postives = 147/167 (88.02%), Query Frame = 0
BLAST of Csor.00g211850 vs. ExPASy Swiss-Prot
Match: Q9S784 (HVA22-like protein c OS=Arabidopsis thaliana OX=3702 GN=HVA22C PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.1e-47 Identity = 96/180 (53.33%), Postives = 129/180 (71.67%), Query Frame = 0
BLAST of Csor.00g211850 vs. ExPASy Swiss-Prot
Match: Q9SYX7 (HVA22-like protein b OS=Arabidopsis thaliana OX=3702 GN=HVA22B PE=2 SV=2) HSP 1 Score: 179.1 bits (453), Expect = 4.3e-44 Identity = 90/172 (52.33%), Postives = 121/172 (70.35%), Query Frame = 0
BLAST of Csor.00g211850 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 2.1e-30 Identity = 68/153 (44.44%), Postives = 95/153 (62.09%), Query Frame = 0
BLAST of Csor.00g211850 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.5e-25 Identity = 56/88 (63.64%), Postives = 67/88 (76.14%), Query Frame = 0
BLAST of Csor.00g211850 vs. NCBI nr
Match: XP_022931034.1 (HVA22-like protein a [Cucurbita moschata] >XP_023530171.1 HVA22-like protein a [Cucurbita pepo subsp. pepo] >KAG6587531.1 HVA22-like protein a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 361 bits (927), Expect = 4.83e-126 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of Csor.00g211850 vs. NCBI nr
Match: XP_022973020.1 (HVA22-like protein a [Cucurbita maxima]) HSP 1 Score: 358 bits (918), Expect = 1.14e-124 Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of Csor.00g211850 vs. NCBI nr
Match: XP_022987204.1 (HVA22-like protein a [Cucurbita maxima]) HSP 1 Score: 333 bits (853), Expect = 1.07e-114 Identity = 161/179 (89.94%), Postives = 171/179 (95.53%), Query Frame = 0
BLAST of Csor.00g211850 vs. NCBI nr
Match: KAG6589501.1 (HVA22-like protein a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 332 bits (851), Expect = 2.32e-114 Identity = 161/181 (88.95%), Postives = 171/181 (94.48%), Query Frame = 0
BLAST of Csor.00g211850 vs. NCBI nr
Match: KAA0057935.1 (HVA22-like protein a [Cucumis melo var. makuwa] >TYJ98622.1 HVA22-like protein a [Cucumis melo var. makuwa]) HSP 1 Score: 332 bits (850), Expect = 3.30e-114 Identity = 160/173 (92.49%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of Csor.00g211850 vs. ExPASy TrEMBL
Match: A0A6J1ET67 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437348 PE=3 SV=1) HSP 1 Score: 361 bits (927), Expect = 2.34e-126 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of Csor.00g211850 vs. ExPASy TrEMBL
Match: A0A6J1IAA6 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111471536 PE=3 SV=1) HSP 1 Score: 358 bits (918), Expect = 5.52e-125 Identity = 173/175 (98.86%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of Csor.00g211850 vs. ExPASy TrEMBL
Match: A0A6J1JI83 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484825 PE=3 SV=1) HSP 1 Score: 333 bits (853), Expect = 5.19e-115 Identity = 161/179 (89.94%), Postives = 171/179 (95.53%), Query Frame = 0
BLAST of Csor.00g211850 vs. ExPASy TrEMBL
Match: A0A5A7UWG1 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002450 PE=3 SV=1) HSP 1 Score: 332 bits (850), Expect = 1.60e-114 Identity = 160/173 (92.49%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of Csor.00g211850 vs. ExPASy TrEMBL
Match: A0A1S3BWS9 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103493983 PE=3 SV=1) HSP 1 Score: 331 bits (849), Expect = 2.11e-114 Identity = 164/179 (91.62%), Postives = 170/179 (94.97%), Query Frame = 0
BLAST of Csor.00g211850 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 256.9 bits (655), Expect = 1.2e-68 Identity = 115/167 (68.86%), Postives = 147/167 (88.02%), Query Frame = 0
BLAST of Csor.00g211850 vs. TAIR 10
Match: AT1G69700.1 (HVA22 homologue C ) HSP 1 Score: 191.0 bits (484), Expect = 7.8e-49 Identity = 96/180 (53.33%), Postives = 129/180 (71.67%), Query Frame = 0
BLAST of Csor.00g211850 vs. TAIR 10
Match: AT5G62490.1 (HVA22 homologue B ) HSP 1 Score: 179.1 bits (453), Expect = 3.1e-45 Identity = 90/172 (52.33%), Postives = 121/172 (70.35%), Query Frame = 0
BLAST of Csor.00g211850 vs. TAIR 10
Match: AT2G42820.1 (HVA22-like protein F ) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-31 Identity = 68/153 (44.44%), Postives = 95/153 (62.09%), Query Frame = 0
BLAST of Csor.00g211850 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26 Identity = 56/88 (63.64%), Postives = 67/88 (76.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|