Csor.00g208400 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTAGAGAGTGGGAGATTGAAAGATGAGAATAATGGACTTGTGTTGAAAGTTAAGAAAGAAAGGGAGAAATGGATGAAGGTGTGTTGTGAGAGGGATGAAGTCAAGTCTAATTCTGATGGATTGTTTGAGGAAATAGGAAATTTGAGAAACAAAATGATTGAAATGGAGAATGAGAAAAGAGTTTTGGAAGAGACAGAATTTGAAGGTGAAATGCTTGGAATCTATTGA ATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTAGAGAGTGGGAGATTGAAAGATGAGAATAATGGACTTGTGTTGAAAGTTAAGAAAGAAAGGGAGAAATGGATGAAGGTGTGTTGTGAGAGGGATGAAGTCAAGTCTAATTCTGATGGATTGTTTGAGGAAATAGGAAATTTGAGAAACAAAATGATTGAAATGGAGAATGAGAAAAGAGTTTTGGAAGAGACAGAATTTGAAGGTGAAATGCTTGGAATCTATTGA ATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGAGATTGAAGAATGTAGAGAGTGGGAGATTGAAAGATGAGAATAATGGACTTGTGTTGAAAGTTAAGAAAGAAAGGGAGAAATGGATGAAGGTGTGTTGTGAGAGGGATGAAGTCAAGTCTAATTCTGATGGATTGTTTGAGGAAATAGGAAATTTGAGAAACAAAATGATTGAAATGGAGAATGAGAAAAGAGTTTTGGAAGAGACAGAATTTGAAGGTGAAATGCTTGGAATCTATTGA MDEVGDRICRLVESERLKNVESGRLKDENNGLVLKVKKEREKWMKVCCERDEVKSNSDGLFEEIGNLRNKMIEMENEKRVLEETEFEGEMLGIY Homology
BLAST of Csor.00g208400 vs. NCBI nr
Match: KAG6599058.1 (hypothetical protein SDJN03_08836, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184 bits (468), Expect = 1.18e-58 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Csor.00g208400 vs. NCBI nr
Match: KAG6590400.1 (hypothetical protein SDJN03_15823, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139 bits (349), Expect = 1.83e-40 Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of Csor.00g208400 vs. NCBI nr
Match: XP_022971789.1 (uncharacterized protein LOC111470467 [Cucurbita maxima]) HSP 1 Score: 133 bits (335), Expect = 1.12e-36 Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of Csor.00g208400 vs. NCBI nr
Match: XP_023524531.1 (uncharacterized protein LOC111788427 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 135 bits (339), Expect = 1.55e-36 Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of Csor.00g208400 vs. NCBI nr
Match: KAG6571252.1 (hypothetical protein SDJN03_30167, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122 bits (305), Expect = 2.07e-33 Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 0
BLAST of Csor.00g208400 vs. ExPASy TrEMBL
Match: A0A6J1I9J8 (uncharacterized protein LOC111470467 OS=Cucurbita maxima OX=3661 GN=LOC111470467 PE=4 SV=1) HSP 1 Score: 133 bits (335), Expect = 5.41e-37 Identity = 70/87 (80.46%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of Csor.00g208400 vs. ExPASy TrEMBL
Match: A0A6J1I2X9 (protein MNN4-like OS=Cucurbita maxima OX=3661 GN=LOC111470470 PE=4 SV=1) HSP 1 Score: 123 bits (309), Expect = 5.35e-33 Identity = 68/87 (78.16%), Postives = 76/87 (87.36%), Query Frame = 0
BLAST of Csor.00g208400 vs. ExPASy TrEMBL
Match: A0A6J1FD80 (polyamine-modulated factor 1-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111444320 PE=4 SV=1) HSP 1 Score: 124 bits (310), Expect = 6.70e-31 Identity = 64/86 (74.42%), Postives = 75/86 (87.21%), Query Frame = 0
BLAST of Csor.00g208400 vs. ExPASy TrEMBL
Match: A0A6J1HKX2 (polyamine-modulated factor 1-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111465485 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 2.05e-28 Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0
BLAST of Csor.00g208400 vs. ExPASy TrEMBL
Match: A0A5D3D489 (Cingulin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00730 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 3.43e-18 Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of Csor.00g208400 vs. TAIR 10
Match: AT5G27330.1 (Prefoldin chaperone subunit family protein ) HSP 1 Score: 45.8 bits (107), Expect = 2.2e-05 Identity = 29/81 (35.80%), Postives = 46/81 (56.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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