
Csor.00g204910 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTGGTTGCCGAAGAATTGCGAGCAGAATCTCCCAAGCTTCCTTCAGAACACTTCTCCGTACAAATTCTCCGGCCAAATCTCCGTTTTCTTCGTTCCCTCTGCCGCCTAAATCCTCTGCACCTTCCGTTAGCCGATTCTCTCTCGCCAGGTATTTCTCTTTATCCTTTTATTTCTCCTTGTTTCTGTACATTATGTCGTTGCACTTGGTCCACTTTTGTTGCTTGTTTTCATTTTGATTTTTCTGATTGGTTCTACTACTGCTAGGTCTCCGTCGGAGCTGGGATGCGTTCAATCGCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCCTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTACTCTCTGCTGACCCTCTCCTGGTCTCTAACATGAAATATTCTACTTTCTTTTGAATTGTGAGTAGCTTTTTTATGTATTACCTGTAGACTTTTCCTTTTCTTGCTCTGCAATTGTATGTCAGTATTTTTGTGATGGCATCTTCTGATTTTTGTTGTAGTTTTCATTGGTTCATTGCTCCGCAAATCGTGCACATTGTATGTGAAGTATCAACCATGTTCCATGATCTTACAATTTGATGTTTTTTTCTTTTTTGACGTCCTTTCTGGCATAAATTGGTACAATTATAGTTTAGAAGTTAGAGTACTGGATTGCTACTGATGCTTTAGGAAGATTTTGGTCAACTTGTATAAAAATGGAAGTCGAACTGAAGCTAGATCGTTTAAGTTGACCATCCCAGGAAGAGAAACCATCCTAGTTTTGGTTCTCCCTTTTTTGGTTTCTTTCTTTGTTGGTTTCAACTTTTGTACCCCAGTTCAACTGGTCTTTATCTCGAGTAAAATTAATTACTAGAACGATAAGGAGAGAATGAATGGAATGACTTTGGTTCTTGACTGGGGACCTTGAAACTGACTGGAGTATTTGGTTCCTGCAGGCACATAA ATGGCTTCTGGTTGCCGAAGAATTGCGAGCAGAATCTCCCAAGCTTCCTTCAGAACACTTCTCCGTACAAATTCTCCGGCCAAATCTCCGTTTTCTTCGTTCCCTCTGCCGCCTAAATCCTCTGCACCTTCCGTTAGCCGATTCTCTCTCGCCAGGTCTCCGTCGGAGCTGGGATGCGTTCAATCGCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCCTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGCACATAA ATGGCTTCTGGTTGCCGAAGAATTGCGAGCAGAATCTCCCAAGCTTCCTTCAGAACACTTCTCCGTACAAATTCTCCGGCCAAATCTCCGTTTTCTTCGTTCCCTCTGCCGCCTAAATCCTCTGCACCTTCCGTTAGCCGATTCTCTCTCGCCAGGTCTCCGTCGGAGCTGGGATGCGTTCAATCGCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCCTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGCACATAA MASGCRRIASRISQASFRTLLRTNSPAKSPFSSFPLPPKSSAPSVSRFSLARSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT Homology
BLAST of Csor.00g204910 vs. ExPASy Swiss-Prot
Match: Q6NNL9 (Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NOXY2 PE=1 SV=2) HSP 1 Score: 46.2 bits (108), Expect = 2.3e-04 Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0
BLAST of Csor.00g204910 vs. NCBI nr
Match: KAG6596864.1 (hypothetical protein SDJN03_10044, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174 bits (442), Expect = 1.02e-54 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Csor.00g204910 vs. NCBI nr
Match: KAG7028395.1 (hypothetical protein SDJN02_09576 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169 bits (428), Expect = 1.52e-52 Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Csor.00g204910 vs. NCBI nr
Match: XP_023538762.1 (uncharacterized protein LOC111799595 isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 165 bits (417), Expect = 7.26e-51 Identity = 89/93 (95.70%), Postives = 90/93 (96.77%), Query Frame = 0
BLAST of Csor.00g204910 vs. NCBI nr
Match: XP_022937856.1 (uncharacterized protein LOC111444048 isoform X2 [Cucurbita moschata]) HSP 1 Score: 164 bits (414), Expect = 2.15e-50 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of Csor.00g204910 vs. NCBI nr
Match: XP_022937781.1 (uncharacterized protein LOC111444048 isoform X1 [Cucurbita moschata]) HSP 1 Score: 164 bits (414), Expect = 2.28e-50 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of Csor.00g204910 vs. ExPASy TrEMBL
Match: A0A6J1FBJ4 (uncharacterized protein LOC111444048 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444048 PE=4 SV=1) HSP 1 Score: 164 bits (414), Expect = 1.04e-50 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of Csor.00g204910 vs. ExPASy TrEMBL
Match: A0A6J1FBC3 (uncharacterized protein LOC111444048 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444048 PE=4 SV=1) HSP 1 Score: 164 bits (414), Expect = 1.11e-50 Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0
BLAST of Csor.00g204910 vs. ExPASy TrEMBL
Match: A0A6J1L2N2 (uncharacterized protein LOC111498548 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498548 PE=4 SV=1) HSP 1 Score: 150 bits (380), Expect = 1.59e-45 Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of Csor.00g204910 vs. ExPASy TrEMBL
Match: A0A6J1KTL9 (uncharacterized protein LOC111498548 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498548 PE=4 SV=1) HSP 1 Score: 150 bits (380), Expect = 1.70e-45 Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of Csor.00g204910 vs. ExPASy TrEMBL
Match: A0A6J1DMJ3 (uncharacterized protein LOC111021400 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021400 PE=4 SV=1) HSP 1 Score: 149 bits (376), Expect = 7.34e-45 Identity = 80/93 (86.02%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of Csor.00g204910 vs. TAIR 10
Match: AT5G47455.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 9.4e-17 Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of Csor.00g204910 vs. TAIR 10
Match: AT5G47455.6 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 9.4e-17 Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of Csor.00g204910 vs. TAIR 10
Match: AT5G47455.7 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 9.4e-17 Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of Csor.00g204910 vs. TAIR 10
Match: AT4G17310.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.8 bits (203), Expect = 1.6e-16 Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 0
BLAST of Csor.00g204910 vs. TAIR 10
Match: AT5G47455.5 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 132 Blast hits to 132 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15 Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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