Csor.00g204720 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g204720
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	50S ribosomal protein L19
Location	Csor_Chr06: 4524666 .. 4526843 (+)
RNA-Seq Expression	Csor.00g204720
Synteny	Csor.00g204720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCAAGATTCTCCCTCAGGTACACTTCCTCCTTTCGCCTTTTCCTTTCTCTCAATACTCCCCTTCTCTACTTCATTTTCCTTTTCAATTTTCTTCTTGTTTCTAGGCCGTGTTTTCCATTCCGAGAACCCCCAACCAATGCGCCCCGAGGAAATTAGGGTTTTGTTCCGCAATTTATGGTAACCGGCTTTCGTTTTCTACTCTTTCCTCGAGTTCAATCGGCTGCCATTTTCACCATGCCGTTGCGGTGCCGGTGAAACGGACTTTTGTTGTGAGAGCTGAGGCAAATTCTGAAGCGGAAGCGGCGGAAGAAGCTCCCGAGGCTGAAGTAGAAGGAGTAGTGGAATCTGATGCTCAGCCTGAGGAGGTGAAACCGCCGAGGAAACCTCGAGTTAAGCTTGGGGATGTAATGGGGGTAATTGTTCTATCCATTCTTGCAACTGGAACTGTAGTTTTGTTACTGGTTCTCTTGAATTCTGTGCTTTGTAGAAGCTCATTACAGTTCAGTTTAGTATAAGATTTCAGCTATCAATGGTGAAATTTTAGATTGCAGGTGACAGTCGAACATGTGATGGGATAGTTTGAATTTGGTTTTAGTTTTGTTCATTGTTTCTCTTCTGTAGATACTTAATAAGCGGGCAGTTGAGGCATCAGAGAAGGAAAGGCCCATTCCAGACGTTAGAACTGGTGATATTGTGGAAATTAAACTGGTAAATCTCATTGTTAATCTTTATAATTTAAACTCCTGTGAAGATTTAAGGTTTATCTTAACTTTCTTTTGAATAAAAATGTTATTTCCACCACAGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTGATATCAAAGCAAAATGCTGGCATCCACACAACGATTAGAATTCGAAGAATTATTGCTGGTGTAGGTGTGGAGATTGTATTTCCACTGTAAGTATTGAGTTCATGTTGATTTCTTTCTACAATCTAATATTTAAAGTCAATAGAATATGAATGTGCTTCATTTCATTCTAACTTGCTGATATAGTCATTATGCACTACACAAAATTTTGCTTCTCTATCTTTCTATTCCCATTTCTTTTAAATAGTTGTGTTGGAACTATCTGAATTTCGCCAAGTCCACTGCTAGCATATGTTGTCTCTTTGGGCTTTCCCTTTCGAGCTTCTCCTCAAGGTTTTTAAAATGCGTTTGCTAGAGAGAGGTTTCCACACCCTTATAAATAATGTTTCGTTCTCCTCCCCAACCGTTGTGGGATCTCACAGTTTTGATCTCATATTTCTAGAACTTGACTTATTCCCAGAATCTTTTGTTCTTTTTCAACATAAAATTGAGTGTGCGTGCTGGTTTAGTAATCAAGCAAGACTAGCTTTGGTTTGAATGACTTGAGGAAACTCAAACCTTGTTACATATGTTGCACTCAAATTCCTGTTTCCATAATAGTAAAGCCCCCCACCAAACAAACTAAAAATAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCACCACATCCATCAAAGTTAGATGAAATCAGAACACCTGCCAAATATTTGACAGCTCCCTTTTGGCTTGCTGAAAAGCGGGCTGTGGTTGTTCGCGTAACTTATGAAATGATAAACATCCAAAATTATATCCCGAGCAACTCAAAACTTGTGCTTGAAGCTCTCGTCGGTCGCTATGCAAAGAATATGACAGTTGGATGCCTGATTGATATATTATAACCTGCTTGATTACTTCTGTGTGATTGGATTTGCAAGTATGGATTTGAGCTCATGATGAACTTCTTGTGCAGGTACTCACCAAACATCAAAGAACTTAAAGTGGTAAGCCACAGGAAGGTGAGGAGGGCAAGGTTATATTATTTGAGAGACAAACTACCAAGACTCTCTACTTTCAAGTGAAACACCCCAATGGCATCTCCTTACACTTTTCCCTTCCCGGTTTTTCATTGAACGTGGATGTGTTGTATGTTGTTATAATTCATTTTTGTGTATTGACGCTATTCCCCTCCTGCATTAACATTTAGTGGTCTAATGATATTATGAGCAGCAGGGGTGTAATGAAAGATATTGTCTTGGATTCCCAAGCTTCTTTGCCATGCTGATGCCATTATCTTGGCTTCTTCTCAGTTGTTATATCTCCTCTTGA

mRNA sequence

ATGGCCTCCAAGATTCTCCCTCAGGCCGTGTTTTCCATTCCGAGAACCCCCAACCAATGCGCCCCGAGGAAATTAGGGTTTTGTTCCGCAATTTATGGTAACCGGCTTTCGTTTTCTACTCTTTCCTCGAGTTCAATCGGCTGCCATTTTCACCATGCCGTTGCGGTGCCGGTGAAACGGACTTTTGTTGTGAGAGCTGAGGCAAATTCTGAAGCGGAAGCGGCGGAAGAAGCTCCCGAGGCTGAAGTAGAAGGAGTAGTGGAATCTGATGCTCAGCCTGAGGAGGTGAAACCGCCGAGGAAACCTCGAGTTAAGCTTGGGGATGTAATGGGGATACTTAATAAGCGGGCAGTTGAGGCATCAGAGAAGGAAAGGCCCATTCCAGACGTTAGAACTGGTGATATTGTGGAAATTAAACTGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTGATATCAAAGCAAAATGCTGGCATCCACACAACGATTAGAATTCGAAGAATTATTGCTGGTGTAGGTGTGGAGATTGTATTTCCACTGTACTCACCAAACATCAAAGAACTTAAAGTGGTAAGCCACAGGAAGGTGAGGAGGGGGTGTAATGAAAGATATTGTCTTGGATTCCCAAGCTTCTTTGCCATGCTGATGCCATTATCTTGGCTTCTTCTCAGTTGTTATATCTCCTCTTGA

Coding sequence (CDS)

ATGGCCTCCAAGATTCTCCCTCAGGCCGTGTTTTCCATTCCGAGAACCCCCAACCAATGCGCCCCGAGGAAATTAGGGTTTTGTTCCGCAATTTATGGTAACCGGCTTTCGTTTTCTACTCTTTCCTCGAGTTCAATCGGCTGCCATTTTCACCATGCCGTTGCGGTGCCGGTGAAACGGACTTTTGTTGTGAGAGCTGAGGCAAATTCTGAAGCGGAAGCGGCGGAAGAAGCTCCCGAGGCTGAAGTAGAAGGAGTAGTGGAATCTGATGCTCAGCCTGAGGAGGTGAAACCGCCGAGGAAACCTCGAGTTAAGCTTGGGGATGTAATGGGGATACTTAATAAGCGGGCAGTTGAGGCATCAGAGAAGGAAAGGCCCATTCCAGACGTTAGAACTGGTGATATTGTGGAAATTAAACTGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGAATTGTGATATCAAAGCAAAATGCTGGCATCCACACAACGATTAGAATTCGAAGAATTATTGCTGGTGTAGGTGTGGAGATTGTATTTCCACTGTACTCACCAAACATCAAAGAACTTAAAGTGGTAAGCCACAGGAAGGTGAGGAGGGGGTGTAATGAAAGATATTGTCTTGGATTCCCAAGCTTCTTTGCCATGCTGATGCCATTATCTTGGCTTCTTCTCAGTTGTTATATCTCCTCTTGA

Protein sequence

MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKRTFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRRGCNERYCLGFPSFFAMLMPLSWLLLSCYISS

Homology

[Close]

BLAST of Csor.00g204720 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-57
Identity = 126/205 (61.46%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 6   LPQAVFSIPRTPNQCAPRKLGF-----CSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 65
           LPQA+  IPR P Q + + LGF     C+    +R+S S LS +  G  F  ++   V+ 
Sbjct: 8   LPQALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  TFVVRA-EANSEAEAAEEAPE-AEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAV 125
            F+VRA E N+EAE+ E   E A+ EG VE   +  E KP RKPR+KLGDVMGILN++A+
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNVE---EVVEAKPTRKPRIKLGDVMGILNQKAI 127

Query: 126 EASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVG 185
           E +EK RP+P++RTGDIVEIKLEVPEN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+G
Sbjct: 128 EVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIG 187

Query: 186 VEIVFPLYSPNIKELKVVSHRKVRR 204
           VEIVFP+YSPNIKE+KVVSHRKVRR
Sbjct: 188 VEIVFPIYSPNIKEIKVVSHRKVRR 208

[Close]

BLAST of Csor.00g204720 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-56
Identity = 130/217 (59.91%), Postives = 162/217 (74.65%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPN-QCAP--RKLGF---------CSAIYGNRLSFSTLSSSSIGC 60
           MASK+LPQA+  IP   + QC P  ++LGF          S+   + L  S  SS+    
Sbjct: 1   MASKVLPQALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSS 60

Query: 61  HFHHAVAVPVKRTFVVRAEA--NSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKL 120
           +F    + P + +FVVR+EA  +S+A A   A  AE E  VES+A+ EE +PPR+ RVKL
Sbjct: 61  NFSSIFSFPARNSFVVRSEAEDSSDAPAESVAVVAEEELPVESEAEAEE-RPPRQQRVKL 120

Query: 121 GDVMGILNKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHT 180
           GD+MGILNK+AV A+E+ RP+P +RTGDIV+I+LEVPEN+RRLSVY+GIVIS+QNAGIHT
Sbjct: 121 GDIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHT 180

Query: 181 TIRIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRR 204
           TIRIRRIIAGVGVEIVFPLYSPNIKE+KVVSHRKVR+
Sbjct: 181 TIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRK 216

[Close]

BLAST of Csor.00g204720 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-55
Identity = 119/210 (56.67%), Postives = 153/210 (72.86%), Query Frame = 0


Query: 2   ASKILPQAVFSIPRTPNQCAPRKLGFCSAI-----YGNRLSFSTLSSSSIGCHFHHAVAV 61
           +S +LPQA+  IPRTP+  + + LG  S +       +RLS S +  +    +F  A+  
Sbjct: 4   SSHLLPQALHMIPRTPS-FSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 63

Query: 62  PVKRTFVVRAEANSEAE---AAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGIL 121
             ++ F+ +AE ++E E     E A E E EG  E+    EE KPP K RVKLGD+MG+L
Sbjct: 64  KKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLL 123

Query: 122 NKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRI 181
           NK+A+E +E  RP+P +RTGDIVEIKLEVPEN+RRLS+Y+GIV+S+QNAGIHTTIRIRRI
Sbjct: 124 NKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRI 183

Query: 182 IAGVGVEIVFPLYSPNIKELKVVSHRKVRR 204
           IAG+GVEIVFP+YSPNIKE+KVVSHRKVRR
Sbjct: 184 IAGIGVEIVFPIYSPNIKEIKVVSHRKVRR 212

[Close]

BLAST of Csor.00g204720 vs. ExPASy Swiss-Prot
Match: Q4JV09 (50S ribosomal protein L19 OS=Corynebacterium jeikeium (strain K411) OX=306537 GN=rplS PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.4e-15
Identity = 43/95 (45.26%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 110 MGILNKRAVEASEKERPIPDVRTGDIVEIKLEVPE-NRRRLSVYRGIVISKQNAGIHTTI 169
           M IL+K  V+A++    IP+ R GD +++ ++V E ++ RL V+RG+VI +QN+GI  T 
Sbjct: 1   MHILDK--VDAAQLRDDIPEFRAGDTLDVHVKVIEGSKSRLQVFRGVVIRRQNSGIRETF 60

Query: 170 RIRRIIAGVGVEIVFPLYSPNIKELKVVSHRKVRR 204
            IR++  G+GVE  FP++SPNI  + V+S  KVRR
Sbjct: 61  TIRKVSFGIGVERTFPVHSPNIDRIDVLSRGKVRR 93

[Close]

BLAST of Csor.00g204720 vs. ExPASy Swiss-Prot
Match: B8HT34 (50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplS PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.4e-15
Identity = 39/89 (43.82%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 116 RAVEASEKERPIPDVRTGDIVEIKLEVPE-NRRRLSVYRGIVISKQNAGIHTTIRIRRII 175
           R++EA + +  +P++  GD V++ + + E N+ R   Y GIVI+K+N+GI+ TI +RRI 
Sbjct: 8   RSLEAEQLKSNLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIF 67

Query: 176 AGVGVEIVFPLYSPNIKELKVVSHRKVRR 204
            GVGVE VF L+SP ++ +K++   KVRR
Sbjct: 68  QGVGVERVFLLHSPRVESIKIIKRGKVRR 96

[Close]

BLAST of Csor.00g204720 vs. NCBI nr
Match: KAG6596883.1 (50S ribosomal protein L19, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 451 bits (1161), Expect = 9.25e-160
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRGCNERYCLGFPSFFAMLMPLSWLLLSCYISS 234
           IVFPLYSPNIKELKVVSHRKVRRGCNERYCLGFPSFFAMLMPLSWLLLSCYISS
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRGCNERYCLGFPSFFAMLMPLSWLLLSCYISS 234

[Close]

BLAST of Csor.00g204720 vs. NCBI nr
Match: KAG7030158.1 (50S ribosomal protein L19, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385 bits (989), Expect = 9.18e-134
Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSE EAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSETEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRG 204
           IVFPLYSPNIKELKVVSHRKVRR 
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRA 204

[Close]

BLAST of Csor.00g204720 vs. NCBI nr
Match: XP_022938903.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 384 bits (986), Expect = 2.63e-133
Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVA PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRG 204
           IVFPLYSPNIKELKVVSHRKVRR 
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRA 204

[Close]

BLAST of Csor.00g204720 vs. NCBI nr
Match: XP_023541012.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382 bits (981), Expect = 1.52e-132
Identity = 200/204 (98.04%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVA PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSEAEAAEEAPE EVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRG 204
           IVFPLYSPNIKELKVVSHRKVRR 
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRA 204

[Close]

BLAST of Csor.00g204720 vs. NCBI nr
Match: XP_023005538.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 378 bits (970), Expect = 7.21e-131
Identity = 200/204 (98.04%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGF SAIYGNRLSFSTLSSSSIGCHFHHAVA PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFRSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAE NSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEVNSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRG 204
           IVFPLYSPNIKELKVVSHRKVRR 
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRA 204

[Close]

BLAST of Csor.00g204720 vs. ExPASy TrEMBL
Match: A0A6J1FK79 (50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444973 PE=3 SV=1)

HSP 1 Score: 384 bits (986), Expect = 1.27e-133
Identity = 202/204 (99.02%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVA PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRG 204
           IVFPLYSPNIKELKVVSHRKVRR 
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRA 204

[Close]

BLAST of Csor.00g204720 vs. ExPASy TrEMBL
Match: A0A6J1L2G3 (50S ribosomal protein L19-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498498 PE=3 SV=1)

HSP 1 Score: 378 bits (970), Expect = 3.49e-131
Identity = 200/204 (98.04%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAVFSIPRTPNQCAPRKLGF SAIYGNRLSFSTLSSSSIGCHFHHAVA PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFRSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120
           TFVVRAE NSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEVNSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKELKVVSHRKVRRG 204
           IVFPLYSPNIKELKVVSHRKVRR 
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRA 204

[Close]

BLAST of Csor.00g204720 vs. ExPASy TrEMBL
Match: A0A0A0L237 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1)

HSP 1 Score: 338 bits (867), Expect = 1.76e-115
Identity = 177/205 (86.34%), Postives = 189/205 (92.20%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAV SIPR PNQCAPR+LGFCSA+ G R+SFSTLSSSSIG HFHH VA P++R
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPLRR 60

Query: 61  TFVVRAEANSEAE-AAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVE 120
            FVVRAEAN EA+ AAEEAPEAEVE  VESDAQPEE KP RKPRVKLGDVMGILNKRA+E
Sbjct: 61  AFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPD+RTGDIVE+KLEV ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIKELKVVSHRKVRRG 204
           EIVFPLYSPNI+E++VVSHRKVRR 
Sbjct: 181 EIVFPLYSPNIREIRVVSHRKVRRA 205

[Close]

BLAST of Csor.00g204720 vs. ExPASy TrEMBL
Match: A0A1S3BJX1 (50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850 PE=3 SV=1)

HSP 1 Score: 335 bits (860), Expect = 2.05e-114
Identity = 177/205 (86.34%), Postives = 187/205 (91.22%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAV SIPR PNQC PR+LGFCSA+ G R+SFSTLSSSSIG HF H V+ P+KR
Sbjct: 1   MASKILPQAVISIPRNPNQCPPRRLGFCSAVSGTRVSFSTLSSSSIGSHFRHTVSAPLKR 60

Query: 61  TFVVRAEANSEAE-AAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVE 120
            FVVRAEAN EAE AAEEAPEAEVE  VESDAQPEE KP RKPRVKLGDVMGILNKRA+E
Sbjct: 61  AFVVRAEANPEAESAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPD+RTGDIVE+KLEV ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIKELKVVSHRKVRRG 204
           EIVFPLYSPNI+E+KVVSHRKVRR 
Sbjct: 181 EIVFPLYSPNIREIKVVSHRKVRRA 205

[Close]

BLAST of Csor.00g204720 vs. ExPASy TrEMBL
Match: A0A5D3CJI4 (50S ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00780 PE=3 SV=1)

HSP 1 Score: 331 bits (848), Expect = 8.62e-112
Identity = 174/202 (86.14%), Postives = 185/202 (91.58%), Query Frame = 0


Query: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60
           MASKILPQAV SIPR PNQC PR+LGFCSA+ G R+SFSTLSSSSIG HF H V+ P+KR
Sbjct: 1   MASKILPQAVISIPRNPNQCPPRRLGFCSAVSGTRVSFSTLSSSSIGSHFRHTVSAPLKR 60

Query: 61  TFVVRAEANSEAE-AAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVE 120
            FVVRAEAN EAE AAEEAPEAEVE  VESDAQPEE KP RKPRVKLGDVMGILNKRA+E
Sbjct: 61  AFVVRAEANPEAESAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPD+RTGDIVE+KLEV ENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIKELKVVSHRKV 201
           EIVFPLYSPNI+E+KVVSHRK+
Sbjct: 181 EIVFPLYSPNIREIKVVSHRKI 202

[Close]

BLAST of Csor.00g204720 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 224.6 bits (571), Expect = 8.5e-59
Identity = 126/205 (61.46%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 6   LPQAVFSIPRTPNQCAPRKLGF-----CSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 65
           LPQA+  IPR P Q + + LGF     C+    +R+S S LS +  G  F  ++   V+ 
Sbjct: 8   LPQALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  TFVVRA-EANSEAEAAEEAPE-AEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAV 125
            F+VRA E N+EAE+ E   E A+ EG VE   +  E KP RKPR+KLGDVMGILN++A+
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNVE---EVVEAKPTRKPRIKLGDVMGILNQKAI 127

Query: 126 EASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVG 185
           E +EK RP+P++RTGDIVEIKLEVPEN+RRLS+Y+GIV+S+QNAGIHTTIRIRRIIAG+G
Sbjct: 128 EVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIG 187

Query: 186 VEIVFPLYSPNIKELKVVSHRKVRR 204
           VEIVFP+YSPNIKE+KVVSHRKVRR
Sbjct: 188 VEIVFPIYSPNIKEIKVVSHRKVRR 208

[Close]

BLAST of Csor.00g204720 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 216.5 bits (550), Expect = 2.3e-56
Identity = 119/210 (56.67%), Postives = 153/210 (72.86%), Query Frame = 0


Query: 2   ASKILPQAVFSIPRTPNQCAPRKLGFCSAI-----YGNRLSFSTLSSSSIGCHFHHAVAV 61
           +S +LPQA+  IPRTP+  + + LG  S +       +RLS S +  +    +F  A+  
Sbjct: 4   SSHLLPQALHMIPRTPS-FSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 63

Query: 62  PVKRTFVVRAEANSEAE---AAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGIL 121
             ++ F+ +AE ++E E     E A E E EG  E+    EE KPP K RVKLGD+MG+L
Sbjct: 64  KKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLL 123

Query: 122 NKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRI 181
           NK+A+E +E  RP+P +RTGDIVEIKLEVPEN+RRLS+Y+GIV+S+QNAGIHTTIRIRRI
Sbjct: 124 NKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRI 183

Query: 182 IAGVGVEIVFPLYSPNIKELKVVSHRKVRR 204
           IAG+GVEIVFP+YSPNIKE+KVVSHRKVRR
Sbjct: 184 IAGIGVEIVFPIYSPNIKEIKVVSHRKVRR 212

[Close]

BLAST of Csor.00g204720 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 118.2 bits (295), Expect = 8.6e-27
Identity = 72/204 (35.29%), Postives = 120/204 (58.82%), Query Frame = 0


Query: 2   ASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVA-VPVKR 61
           ++++L +  FSI  T    +    G  S     +L F +  SS    +   ++       
Sbjct: 7   STRLLQRHRFSISNTLRFTSSSSCGSWSENESRKLGFDSCPSSRAATYLISSLKNAGFSS 66

Query: 62  TFVVRAEANSEAEAAEEAPEAEVEGVVESD-AQPEEVKPPRKPRVKLGDVMGILNKRAVE 121
           + + +      +       ++ V+G  ESD   P+ +K  R  +     +M I++K AVE
Sbjct: 67  SAIPKQNFTYASRCFSTTGDSSVQGSPESDCVVPQRIKFKRLDKT-AKHIMQIVDKEAVE 126

Query: 122 ASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 181
                R IP+++ G IV++K+EVPEN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGV
Sbjct: 127 EVRSLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGV 186

Query: 182 EIVFPLYSPNIKELKVVSHRKVRR 204
           E +FPLYSPN++E+KVV  +KVRR
Sbjct: 187 ESMFPLYSPNLREIKVVDKKKVRR 209

[Close]

BLAST of Csor.00g204720 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-26
Identity = 60/128 (46.88%), Postives = 95/128 (74.22%), Query Frame = 0


Query: 77  EAPEAEVEGVVESD-AQPEEVKPPRKPRVKLGDVMGILNKRAVEASEKERPIPDVRTGDI 136
           ++ ++  +G  ESD   P+ +K  R  +     +M I++K AVE     R IP+++ G I
Sbjct: 87  DSVQSTPQGSPESDCVVPQRIKFKRLDKT-AKHIMQIVDKEAVEEVRNLREIPEIKPGYI 146

Query: 137 VEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKELKV 196
           V++K+EVPEN+RR+S+ +G+VI+++NAG+++T RIRR++AGVGVE +FPLYSPN++E+KV
Sbjct: 147 VQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKV 206

Query: 197 VSHRKVRR 204
           V  +KVRR
Sbjct: 207 VDKKKVRR 213

[Close]

BLAST of Csor.00g204720 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-26
Identity = 79/212 (37.26%), Postives = 128/212 (60.38%), Query Frame = 0


Query: 2   ASKILPQAVFSI----PRTPNQCA------PRKLGFCSAIYGNRLSFSTLSSSSIGCHFH 61
           ++++L +  FSI    P T + C        RKLGF S  + +  + + L SS     F 
Sbjct: 7   STRLLQRHRFSISNTLPFTSSSCGSWSANESRKLGFDS--FPSTRAATYLISSLKNAGFS 66

Query: 62  HAVAVPVKRTFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMG 121
               VP K+ F  R   ++  ++ + +PE++          P+ +K  R  +     +M 
Sbjct: 67  SLAVVP-KQNFSSRC-FSTTGDSVQGSPESDC-------VVPQRIKFKRLDKT-AKHIMQ 126

Query: 122 ILNKRAVEASEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIR 181
           I++K AVE     R IP+++ G IV++K+EVPEN+RR+S+ +G+VI+++NAG+++T RIR
Sbjct: 127 IVDKEAVEEVRTLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIR 186

Query: 182 RIIAGVGVEIVFPLYSPNIKELKVVSHRKVRR 204
           R++AGVGVE +FPLYSPN++ +KVV  +KVRR
Sbjct: 187 RLVAGVGVESMFPLYSPNLRVIKVVDKKKVRR 206

The following BLAST results are available for this feature:

BLAST of Csor.00g204720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W463	1.2e-57	61.46	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
P82413	1.7e-56	59.91	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
Q8RXX5	3.3e-55	56.67	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q4JV09	7.4e-15	45.26	50S ribosomal protein L19 OS=Corynebacterium jeikeium (strain K411) OX=306537 GN...	[more]
B8HT34	7.4e-15	43.82	50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]

BLAST of Csor.00g204720 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596883.1	9.25e-160	100.00	50S ribosomal protein L19, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]
KAG7030158.1	9.18e-134	99.02	50S ribosomal protein L19, chloroplastic [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022938903.1	2.63e-133	99.02	50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata]	[more]
XP_023541012.1	1.52e-132	98.04	50S ribosomal protein L19-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_023005538.1	7.21e-131	98.04	50S ribosomal protein L19-1, chloroplastic [Cucurbita maxima]	[more]

BLAST of Csor.00g204720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FK79	1.27e-133	99.02	50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L2G3	3.49e-131	98.04	50S ribosomal protein L19-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0L237	1.76e-115	86.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1	[more]
A0A1S3BJX1	2.05e-114	86.34	50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850...	[more]
A0A5D3CJI4	8.62e-112	86.14	50S ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Csor.00g204720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17560.1	8.5e-59	61.46	Ribosomal protein L19 family protein	[more]
AT5G47190.1	2.3e-56	56.67	Ribosomal protein L19 family protein	[more]
AT4G11630.1	8.6e-27	35.29	Ribosomal protein L19 family protein	[more]
AT5G11750.1	1.9e-26	46.88	Ribosomal protein L19 family protein	[more]
AT1G24240.1	2.5e-26	37.26	Ribosomal protein L19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 173..196 score: 43.06 coord: 114..143 score: 21.94
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 117..203 e-value: 6.4E-24 score: 84.0
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 1..203
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 106..205 e-value: 3.4E-23 score: 83.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..101
None	No IPR available	PANTHER	PTHR15680:SF10	50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED	coord: 1..203
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 109..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g204720.m01	Csor.00g204720.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome