Csor.00g203670 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g203670
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pectate lyase
Location	Csor_Chr01: 4236700 .. 4238599 (+)
RNA-Seq Expression	Csor.00g203670
Synteny	Csor.00g203670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTCAGCTCATTATCCTGTCGCTCATTTCCTTGTCACTCCTCGCCGCCGTTTCCCACACCGAAGCCCGCGCCATGAACATGAACGCCATCGATCGATGCTGGCGACCGAACCCATACTGGAGAAAAAACAGGCAAAAGCTGGCCCTTTGTTCAATTGGGTTCGTCGGAAAAATGACAAACAACATCGGAAGAAACCTCGTACACTACCAAGTCACGGACCCCAGCGACGACCCACTAACCCCACGCCCAGGCACCCTCAGATACGGCGCCACAATGATCAAACCCAAAGTGTGGATCACGTTTCAAAAAGACATGCACATTGTGCTCAACAAGCCGCTTCTTATTAGCAGCTACACGGCCATCGACGGCCGTGGCGCCACCGTGCACATCACGGGGAATGCGTGTCTGATGGTGTCTAGAGCCACCAATGTCATAATCCATGGGCTTATTATCCACCATTGCAAGGCCCAGGCGGCTGGCCGTGTAATGGGGCCGGGTTCGAAGATCGTTTCGTTGGGACACGTGGACGGTGATGCCATTCGTTTGGTTAGTGCTTCTAAGATTTGGATTGACCATAACACGCTGTATCGGTGTGAGGATGGGCTGATTGATGTCACTAGAGGCTCTACTGATATCACCATTTCTAACAATTGGTTGAGAGATCAAGATAAGGTTATACTTTTGGGTCACGACGATGATTATTTTCGGGACCGAAACATGAAGGTTACTCTTGTTTATAACCATTTCGGACCTAATTGCAACCAACGGATGCCCAGGTAACATTTAACACAGTATCAAAACATAACATAAATTTTAAGATTAAATTAATAAAAATATTTGTAAATTTTGTATTTTATCTTAAAAATACTCTTTAAATTTTTCAAAATTTTTTTGGAATAAATTAAAAAAAATATCTTTATTGTTAATTTTGGATGAAAATTATTAATAATTTGTTTTAAAACATGTTAAAAAAAAGTTTCAAAAATATCTTTCTTAAGTTTTATTGATATCGAGCCTTTTTCTTAAAAAAATATTAATTTTTTTAAAAAGTTAAAAAATAATTGGTACATGGACGAAATTGTTAGTACCTTTAAAAAAATAACTAAAAATTTTAATTTTTTTTACGGTATAGATAGACATTTTCCGTTACAATAATAACTTTTTAATTTTATTTTATAAAAGTTGATGAGTAATTATTAAACATAGTATTAATGGTAATAGTATTTTTCAACTTTTTTAGTTGAAAAGTACTACGAAACTTTTGAAAGTTTAAATAAATAAATTATTAACGGTAACTATATTTTTTTAAAATTTAAAGGTAATATTGAAATTCTCATAAATTTATAATTTTGAGACAAAATATAAAGTTTACGGATATTTTCTTTTTTATTAATTTAACAAAATTTGGTATGAAAATACAGGATTCGATACGGGTATGCACACGTGGCGAACAATTTGTACCAAGGTTGGACACAATACGCAATTGGAGGCAGCATGAATCCTAGTGTGAAGAGTGAAGCCAACCTTTTCATAGCATCAAAATCAAAACAGGCAATAATAATAATAATAACAACAACACCAATATATAAAAACTCCATATTTGGTTAAAAAATTGAGCCTTTTCTTACCAAACAACAACAAATGCTTATTTGAAAATCATAAAATGCAGATCATATGGAGCACAGGCAAAGTAGAGAACGCCAAGTGGAAGTTCCATTCAGTAAGAGACGTTTTTGAAAACGGCGCTTCCTTCGCACAGATCGGCGCTGGCCGAGGCGGTGTCAAGCCAAATTACAATGCCCTGCAGCGCTTCCTAGTGGTAGACGCCAAGTGGTTGCGGTCATTGACAAGCTCTTCCGGCGCCCTGCGCTGCTCACCACGCTCAAGGTGTTGA

mRNA sequence

ATGGCCACTCAGCTCATTATCCTGTCGCTCATTTCCTTGTCACTCCTCGCCGCCGTTTCCCACACCGAAGCCCGCGCCATGAACATGAACGCCATCGATCGATGCTGGCGACCGAACCCATACTGGAGAAAAAACAGGCAAAAGCTGGCCCTTTGTTCAATTGGGTTCGTCGGAAAAATGACAAACAACATCGGAAGAAACCTCGTACACTACCAAGTCACGGACCCCAGCGACGACCCACTAACCCCACGCCCAGGCACCCTCAGATACGGCGCCACAATGATCAAACCCAAAGTGTGGATCACGTTTCAAAAAGACATGCACATTGTGCTCAACAAGCCGCTTCTTATTAGCAGCTACACGGCCATCGACGGCCGTGGCGCCACCGTGCACATCACGGGGAATGCGTGTCTGATGGTGTCTAGAGCCACCAATGTCATAATCCATGGGCTTATTATCCACCATTGCAAGGCCCAGGCGGCTGGCCGTGTAATGGGGCCGGGTTCGAAGATCGTTTCGTTGGGACACGTGGACGGTGATGCCATTCGTTTGGTTAGTGCTTCTAAGATTTGGATTGACCATAACACGCTGTATCGGTGTGAGGATGGGCTGATTGATGTCACTAGAGGCTCTACTGATATCACCATTTCTAACAATTGGTTGAGAGATCAAGATAAGGTTATACTTTTGGGTCACGACGATGATTATTTTCGGGACCGAAACATGAAGGTTACTCTTGTTTATAACCATTTCGGACCTAATTGCAACCAACGGATGCCCAGGATTCGATACGGGTATGCACACGTGGCGAACAATTTGTACCAAGGCAAAGTAGAGAACGCCAAGTGGAAGTTCCATTCAGTAAGAGACGTTTTTGAAAACGGCGCTTCCTTCGCACAGATCGGCGCTGGCCGAGGCGGTGTCAAGCCAAATTACAATGCCCTGCAGCGCTTCCTAGTGGTAGACGCCAAGTGGTTGCGGTCATTGACAAGCTCTTCCGGCGCCCTGCGCTGCTCACCACGCTCAAGGTGTTGA

Coding sequence (CDS)

ATGGCCACTCAGCTCATTATCCTGTCGCTCATTTCCTTGTCACTCCTCGCCGCCGTTTCCCACACCGAAGCCCGCGCCATGAACATGAACGCCATCGATCGATGCTGGCGACCGAACCCATACTGGAGAAAAAACAGGCAAAAGCTGGCCCTTTGTTCAATTGGGTTCGTCGGAAAAATGACAAACAACATCGGAAGAAACCTCGTACACTACCAAGTCACGGACCCCAGCGACGACCCACTAACCCCACGCCCAGGCACCCTCAGATACGGCGCCACAATGATCAAACCCAAAGTGTGGATCACGTTTCAAAAAGACATGCACATTGTGCTCAACAAGCCGCTTCTTATTAGCAGCTACACGGCCATCGACGGCCGTGGCGCCACCGTGCACATCACGGGGAATGCGTGTCTGATGGTGTCTAGAGCCACCAATGTCATAATCCATGGGCTTATTATCCACCATTGCAAGGCCCAGGCGGCTGGCCGTGTAATGGGGCCGGGTTCGAAGATCGTTTCGTTGGGACACGTGGACGGTGATGCCATTCGTTTGGTTAGTGCTTCTAAGATTTGGATTGACCATAACACGCTGTATCGGTGTGAGGATGGGCTGATTGATGTCACTAGAGGCTCTACTGATATCACCATTTCTAACAATTGGTTGAGAGATCAAGATAAGGTTATACTTTTGGGTCACGACGATGATTATTTTCGGGACCGAAACATGAAGGTTACTCTTGTTTATAACCATTTCGGACCTAATTGCAACCAACGGATGCCCAGGATTCGATACGGGTATGCACACGTGGCGAACAATTTGTACCAAGGCAAAGTAGAGAACGCCAAGTGGAAGTTCCATTCAGTAAGAGACGTTTTTGAAAACGGCGCTTCCTTCGCACAGATCGGCGCTGGCCGAGGCGGTGTCAAGCCAAATTACAATGCCCTGCAGCGCTTCCTAGTGGTAGACGCCAAGTGGTTGCGGTCATTGACAAGCTCTTCCGGCGCCCTGCGCTGCTCACCACGCTCAAGGTGTTGA

Protein sequence

MATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQGKVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC

Homology

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BLAST of Csor.00g203670 vs. ExPASy Swiss-Prot
Match: O65388 (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 2.7e-74
Identity = 162/381 (42.52%), Postives = 214/381 (56.17%), Query Frame = 0


Query: 6   IILSLISLSLLAAVSHTEARA----------MNMNAIDRCWRPNPYWRKNRQKLALCSIG 65
           + L++ISL L AA S +   A          +  N ID CWR NPYW  NR+ LA C++G
Sbjct: 4   LFLTIISL-LFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVG 63

Query: 66  FVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPL 125
           F GK     G+    Y VT+PSDDP  PRPGTLRY     KP +WITF +DM IVL   L
Sbjct: 64  F-GKSAVG-GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKP-LWITFARDMVIVLRNEL 123

Query: 126 LISSYTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLG 185
           +++SY  IDGRGA V I    C+ +   ++VIIHG+ IH CK   +GRV    + + S  
Sbjct: 124 IMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRK 183

Query: 186 HVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDD 245
             DGDAI +  +S IWIDH    RC+DGLIDV   ST +TISNN+    DKV+LLGH+D+
Sbjct: 184 GSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDN 243

Query: 246 YFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQ-------------------- 305
              D+ M+VT+ +NHFGP   +RMPR+R GYAHVANN Y+                    
Sbjct: 244 NVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGN 303

Query: 306 --------------GKVENA----KWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQR 339
                          ++++     +WK+ + +DVF+NGA F  + +G G V P Y   +R
Sbjct: 304 YFVASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAER 363

[Close]

BLAST of Csor.00g203670 vs. ExPASy Swiss-Prot
Match: Q9C8G4 (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.5e-72
Identity = 159/382 (41.62%), Postives = 210/382 (54.97%), Query Frame = 0


Query: 1   MATQLIILSLISLSLLAAVSHT------EARAMNMNAIDRCWRPNPYWRKNRQKLALCSI 60
           MA+ ++I+SL+  +  + +  T       A  +++N ID CWR NP W  NRQ LA C++
Sbjct: 1   MASLVVIVSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAV 60

Query: 61  GFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKP 120
           G+ GK     G+N   Y VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVL   
Sbjct: 61  GY-GKAAIG-GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQ 120

Query: 121 LLISSYTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSL 180
           L+I+SY  IDGRGA V I    CL + +  +VIIHG+ IH CKA   G            
Sbjct: 121 LMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG------------ 180

Query: 181 GHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDD 240
             +DGD IR+  ++ +WIDH  L RC DGLIDV   ST +TISNN+    DKV+LLGHDD
Sbjct: 181 --MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDD 240

Query: 241 DYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQ------------------- 300
            Y  D++M+VT+ +N FGP   +RMPR+R GYAHVANN Y+                   
Sbjct: 241 SYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEG 300

Query: 301 -------------------GKVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQ 339
                                 ++ +WK+ + RDVF NGA F   G     V+P Y   +
Sbjct: 301 NYFVAPEKRSSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGE 360

[Close]

BLAST of Csor.00g203670 vs. ExPASy Swiss-Prot
Match: O65456 (Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.8e-71
Identity = 147/353 (41.64%), Postives = 191/353 (54.11%), Query Frame = 0


Query: 29  MNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTL 88
           MN +D CWR    W  NR+ LA C +GF          NL  Y VT+P D+   P+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 89  RYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNVII 148
           RYG    KP +WITF KDM I L   L+++SY  IDGRGA V I    C+ +   TNVI+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 149 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 208
           HG+ IH CK    G V    + +      DGDAI +  +S IWIDH  L  C DGLIDV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 209 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAH 268
             ST ITISNN+    DKV+LLGH+DD+ +D  MKVT+ +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 269 VANNLYQGKV------------------------ENAK-------------WKFHSVRDV 328
           VANN Y   +                         N+K             W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 329 FENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 345
           F+NGA F  + +G G +   Y++ QRF V     + SLT+ +G L C+    C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Csor.00g203670 vs. ExPASy Swiss-Prot
Match: O65457 (Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.8e-70
Identity = 143/353 (40.51%), Postives = 190/353 (53.82%), Query Frame = 0


Query: 29  MNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTL 88
           MN +D CWR    W  NR+ LA C++GF          N+  Y VT+P D+   P PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 89  RYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNVII 148
           RYG    KP +WITF KDM I L   L+++SY  IDGRGA V I    C+ +   TNVI+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 149 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 208
           HG+ IH CK   +G+V    + +      DGDAI +  +S +WIDH  L  C DGLIDV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 209 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAH 268
             ST ITISNN+    DKV+LLGH+D++ +D  MKVT+ +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 269 VANNLYQGKVENA-------------------------------------KWKFHSVRDV 328
           VANN Y   +  A                                      W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 329 FENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 345
           F+NGA F  + +G G +   Y++ QRF V     + SLT+ +G L C+    C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Csor.00g203670 vs. ExPASy Swiss-Prot
Match: Q9SVQ6 (Putative pectate lyase 14 OS=Arabidopsis thaliana OX=3702 GN=At4g13210 PE=3 SV=2)

HSP 1 Score: 266.5 bits (680), Expect = 4.1e-70
Identity = 151/355 (42.54%), Postives = 188/355 (52.96%), Query Frame = 0


Query: 30  NAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSD-DPLTPRPGTL 89
           N ID CWR +  W + R++LA C+IGF        GR+  +Y VTDPSD DP+TP+PGTL
Sbjct: 90  NPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVG--GRDGRYYIVTDPSDHDPVTPKPGTL 149

Query: 90  RYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNVII 149
           RY     +P +WI F++DM I L++ L+++S+  IDGRG  VHI G ACL V   TN+II
Sbjct: 150 RYAVIQDEP-LWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIII 209

Query: 150 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 209
           HG+ IH CK      V    S        DGD I +  +S IWIDHN+L  C DGLID  
Sbjct: 210 HGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAI 269

Query: 210 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAH 269
            GST ITISNN+L   ++ ILLGH D Y RD+ M+VT+ YNHFG    QRMPR R+GY H
Sbjct: 270 MGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFH 329

Query: 270 VANNLY---------------------------------------QGKVENAKWKFHSVR 329
           V NN Y                                        GK E   W + S  
Sbjct: 330 VVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQG 389

Query: 330 DVFENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 345
           D+  NGA F   GA   G   NY          +  +  LTSSSGAL+C   + C
Sbjct: 390 DLMLNGAYFTSSGA---GASANYARASSLAAKSSSLVGMLTSSSGALKCRIGTLC 438

[Close]

BLAST of Csor.00g203670 vs. NCBI nr
Match: KAG6607417.1 (putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 709 bits (1829), Expect = 6.82e-258
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 1   MATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKM 60
           MATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKM
Sbjct: 1   MATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKM 60

Query: 61  TNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSY 120
           TNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSY
Sbjct: 61  TNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSY 120

Query: 121 TAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGD 180
           TAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGD
Sbjct: 121 TAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGD 180

Query: 181 AIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDR 240
           AIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDR
Sbjct: 181 AIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDR 240

Query: 241 NMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQGKVENAKWKFHSVRDVFENGASFAQ 300
           NMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQGKVENAKWKFHSVRDVFENGASFAQ
Sbjct: 241 NMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQGKVENAKWKFHSVRDVFENGASFAQ 300

Query: 301 IGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 344
           IGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC
Sbjct: 301 IGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 344

[Close]

BLAST of Csor.00g203670 vs. NCBI nr
Match: XP_022997815.1 (putative pectate lyase 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 634 bits (1636), Expect = 2.41e-228
Identity = 311/352 (88.35%), Postives = 313/352 (88.92%), Query Frame = 0


Query: 27  MNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPG 86
           MNMNAIDRCWR NPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDP+DDPLTPRPG
Sbjct: 1   MNMNAIDRCWRSNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPTDDPLTPRPG 60

Query: 87  TLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNV 146
           TLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNV
Sbjct: 61  TLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNV 120

Query: 147 IIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLID 206
           IIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLID
Sbjct: 121 IIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLID 180

Query: 207 VTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGY 266
           VTRGSTDITISNNWLRDQDKVILLGHDDDY  DRNMKVTLVYNHFGPNCNQRMPRIRYGY
Sbjct: 181 VTRGSTDITISNNWLRDQDKVILLGHDDDYIWDRNMKVTLVYNHFGPNCNQRMPRIRYGY 240

Query: 267 AHVANNLYQG----------------------------------KVENAKWKFHSVRDVF 326
           AHVANNLYQG                                  KVENAKW FHSVRDVF
Sbjct: 241 AHVANNLYQGWTQYAIGGSMNPSVKSEANLFMASKSKQIIWSTGKVENAKWNFHSVRDVF 300

Query: 327 ENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 344
           ENGASFAQIGAGRGGVKP+YNALQRF VVDAKWLRSLTSSSGALRCSPRSRC
Sbjct: 301 ENGASFAQIGAGRGGVKPHYNALQRFPVVDAKWLRSLTSSSGALRCSPRSRC 352

[Close]

BLAST of Csor.00g203670 vs. NCBI nr
Match: KAG7037086.1 (putative pectate lyase 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 618 bits (1594), Expect = 6.05e-222
Identity = 310/344 (90.12%), Postives = 311/344 (90.41%), Query Frame = 0


Query: 1   MATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKM 60
           MATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKM
Sbjct: 36  MATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKM 95

Query: 61  TNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSY 120
           TNNIGRNLVHYQVTDPSDDPLTPR GTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSY
Sbjct: 96  TNNIGRNLVHYQVTDPSDDPLTPRSGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSY 155

Query: 121 TAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGD 180
           TAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGD
Sbjct: 156 TAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGD 215

Query: 181 AIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDR 240
           AIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDR
Sbjct: 216 AIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDR 275

Query: 241 NMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQGKVENAKWKFHSVRDVFENGASFAQ 300
           NMK+                               GKVENAKWKFHSVRDVFENGASFAQ
Sbjct: 276 NMKII---------------------------WSTGKVENAKWKFHSVRDVFENGASFAQ 335

Query: 301 IGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 344
           IGAGRGGVKPNYNALQRF VVDAKWLRSLTSSSGALRCSPRSRC
Sbjct: 336 IGAGRGGVKPNYNALQRFPVVDAKWLRSLTSSSGALRCSPRSRC 352

[Close]

BLAST of Csor.00g203670 vs. NCBI nr
Match: XP_022923821.1 (putative pectate lyase 2 [Cucurbita moschata])

HSP 1 Score: 605 bits (1559), Expect = 3.52e-216
Identity = 290/377 (76.92%), Postives = 321/377 (85.15%), Query Frame = 0


Query: 2   ATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMT 61
           ATQL +LSLISL+LL+AVS++E   + MNAIDRCWR NPYWR+NRQ+L +CS+GFVGKMT
Sbjct: 3   ATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 62

Query: 62  NNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYT 121
           NNIGRNL+ YQVTDPSDDP+ PRPGTLRYGATMIK KVWITFQKDMHI+L+KPLLISSYT
Sbjct: 63  NNIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYT 122

Query: 122 AIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDA 181
           AIDGRGA+VHI+GNACL+VS+ATN+IIHGLIIHHCKAQ AG+VMGP SK+VSLGHVDGDA
Sbjct: 123 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 182

Query: 182 IRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRN 241
           IRLVSASK+WIDHNTLYRCEDGL+DVTRGSTDITISNNW RDQDKVILLGH+D Y RD+N
Sbjct: 183 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 242

Query: 242 MKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQG------------------------- 301
           M+VT+VYNHFGPNCNQRMPRIR+GYAHVANNLYQG                         
Sbjct: 243 MRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 302

Query: 302 ---------KVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLR 344
                    KVE AKWKFHSVRDVFENGASF QIG GRGGVKPNY+A QRF V DAKW+R
Sbjct: 303 SKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVR 362

[Close]

BLAST of Csor.00g203670 vs. NCBI nr
Match: KAG7020030.1 (putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 604 bits (1558), Expect = 5.00e-216
Identity = 289/377 (76.66%), Postives = 321/377 (85.15%), Query Frame = 0


Query: 2   ATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMT 61
           ATQL +LSLISL+LL+AVS++E   + MNAIDRCWR NPYWR+NRQ+L +CS+GFVGKMT
Sbjct: 3   ATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 62

Query: 62  NNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYT 121
           NN+GRNL+ YQVTDPSDDP+ PRPGTLRYGATMIK KVWITFQKDMHI+L+KPLLISSYT
Sbjct: 63  NNVGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYT 122

Query: 122 AIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDA 181
           AIDGRGA+VHI+GNACL+VS+ATN+IIHGLIIHHCKAQ AG+VMGP SK+VSLGHVDGDA
Sbjct: 123 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 182

Query: 182 IRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRN 241
           IRLVSASK+WIDHNTLYRCEDGL+DVTRGSTDITISNNW RDQDKVILLGH+D Y RD+N
Sbjct: 183 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 242

Query: 242 MKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQG------------------------- 301
           M+VT+VYNHFGPNCNQRMPRIR+GYAHVANNLYQG                         
Sbjct: 243 MRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 302

Query: 302 ---------KVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLR 344
                    KVE AKWKFHSVRDVFENGASF QIG GRGGVKPNY+A QRF V DAKW+R
Sbjct: 303 SKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVR 362

[Close]

BLAST of Csor.00g203670 vs. ExPASy TrEMBL
Match: A0A6J1KAY1 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111492658 PE=3 SV=1)

HSP 1 Score: 634 bits (1636), Expect = 1.17e-228
Identity = 311/352 (88.35%), Postives = 313/352 (88.92%), Query Frame = 0


Query: 27  MNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPG 86
           MNMNAIDRCWR NPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDP+DDPLTPRPG
Sbjct: 1   MNMNAIDRCWRSNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPTDDPLTPRPG 60

Query: 87  TLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNV 146
           TLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNV
Sbjct: 61  TLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNV 120

Query: 147 IIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLID 206
           IIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLID
Sbjct: 121 IIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLID 180

Query: 207 VTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGY 266
           VTRGSTDITISNNWLRDQDKVILLGHDDDY  DRNMKVTLVYNHFGPNCNQRMPRIRYGY
Sbjct: 181 VTRGSTDITISNNWLRDQDKVILLGHDDDYIWDRNMKVTLVYNHFGPNCNQRMPRIRYGY 240

Query: 267 AHVANNLYQG----------------------------------KVENAKWKFHSVRDVF 326
           AHVANNLYQG                                  KVENAKW FHSVRDVF
Sbjct: 241 AHVANNLYQGWTQYAIGGSMNPSVKSEANLFMASKSKQIIWSTGKVENAKWNFHSVRDVF 300

Query: 327 ENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 344
           ENGASFAQIGAGRGGVKP+YNALQRF VVDAKWLRSLTSSSGALRCSPRSRC
Sbjct: 301 ENGASFAQIGAGRGGVKPHYNALQRFPVVDAKWLRSLTSSSGALRCSPRSRC 352

[Close]

BLAST of Csor.00g203670 vs. ExPASy TrEMBL
Match: A0A6J1E7R9 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431420 PE=3 SV=1)

HSP 1 Score: 605 bits (1559), Expect = 1.70e-216
Identity = 290/377 (76.92%), Postives = 321/377 (85.15%), Query Frame = 0


Query: 2   ATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMT 61
           ATQL +LSLISL+LL+AVS++E   + MNAIDRCWR NPYWR+NRQ+L +CS+GFVGKMT
Sbjct: 3   ATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 62

Query: 62  NNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYT 121
           NNIGRNL+ YQVTDPSDDP+ PRPGTLRYGATMIK KVWITFQKDMHI+L+KPLLISSYT
Sbjct: 63  NNIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKDMHILLHKPLLISSYT 122

Query: 122 AIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDA 181
           AIDGRGA+VHI+GNACL+VS+ATN+IIHGLIIHHCKAQ AG+VMGP SK+VSLGHVDGDA
Sbjct: 123 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 182

Query: 182 IRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRN 241
           IRLVSASK+WIDHNTLYRCEDGL+DVTRGSTDITISNNW RDQDKVILLGH+D Y RD+N
Sbjct: 183 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 242

Query: 242 MKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQG------------------------- 301
           M+VT+VYNHFGPNCNQRMPRIR+GYAHVANNLYQG                         
Sbjct: 243 MRVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 302

Query: 302 ---------KVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLR 344
                    KVE AKWKFHSVRDVFENGASF QIG GRGGVKPNY+A QRF V DAKW+R
Sbjct: 303 SKQIVWSTGKVEAAKWKFHSVRDVFENGASFGQIGVGRGGVKPNYSAQQRFPVADAKWVR 362

[Close]

BLAST of Csor.00g203670 vs. ExPASy TrEMBL
Match: A0A6J1KLU6 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111495358 PE=3 SV=1)

HSP 1 Score: 598 bits (1543), Expect = 4.66e-214
Identity = 287/377 (76.13%), Postives = 319/377 (84.62%), Query Frame = 0


Query: 2   ATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMT 61
           ATQL +LSLISL+LL+AVS++E   + MNAIDRCWR NPYWR+NRQ+L +CS+GFVGKMT
Sbjct: 3   ATQLFVLSLISLTLLSAVSYSEGNGLKMNAIDRCWRSNPYWRRNRQQLGVCSVGFVGKMT 62

Query: 62  NNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYT 121
           NNIGRNL+ YQVTDPSDDP+ PRPGTLRYGATMIK KVWITFQK MHI+L+KPLLISSYT
Sbjct: 63  NNIGRNLIRYQVTDPSDDPINPRPGTLRYGATMIKSKVWITFQKGMHILLHKPLLISSYT 122

Query: 122 AIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDA 181
           AIDGRGA+VHI+GNACL+VS+ATN+IIHGLIIHHCKAQ AG+VMGP SK+VSLGHVDGDA
Sbjct: 123 AIDGRGASVHISGNACLVVSKATNIIIHGLIIHHCKAQGAGQVMGPNSKLVSLGHVDGDA 182

Query: 182 IRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRN 241
           IRLVSASK+WIDHNTLYRCEDGL+DVTRGSTDITISNNW RDQDKVILLGH+D Y RD+N
Sbjct: 183 IRLVSASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHEDGYVRDKN 242

Query: 242 MKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQG------------------------- 301
           M+VT++YNHFGPNCNQRMPRIR+GYAHVANNLYQG                         
Sbjct: 243 MRVTVIYNHFGPNCNQRMPRIRHGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 302

Query: 302 ---------KVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLR 344
                    KVE AKWKFHSV DVFENGASF QIG GRGGVKPNY+A QRF V DAKW+R
Sbjct: 303 LKQIVWSTGKVEAAKWKFHSVGDVFENGASFEQIGVGRGGVKPNYSAQQRFPVADAKWVR 362

[Close]

BLAST of Csor.00g203670 vs. ExPASy TrEMBL
Match: A0A1S3AY18 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1)

HSP 1 Score: 585 bits (1509), Expect = 7.83e-209
Identity = 283/377 (75.07%), Postives = 309/377 (81.96%), Query Frame = 0


Query: 4   QLIILSLISLSLLAA--VSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMT 63
           QL +LSLIS   L +  VS +EA  ++MNAIDRCWR NPYWR+NRQ+LA CS+GF GKMT
Sbjct: 6   QLSVLSLISFIFLISNVVSSSEAHGLSMNAIDRCWRSNPYWRRNRQQLATCSVGFAGKMT 65

Query: 64  NNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYT 123
           NN+GRNL+HYQVTDPSDDP+ PRPGTLRYGATMIK KVWITFQKDMHIVL KPLLISS+T
Sbjct: 66  NNMGRNLIHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFQKDMHIVLQKPLLISSFT 125

Query: 124 AIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDA 183
           AIDGRGATVHITGNACLMV RATN+IIHGLIIHHC++QAAG VMGP SK++SLGHVDGDA
Sbjct: 126 AIDGRGATVHITGNACLMVLRATNIIIHGLIIHHCRSQAAGEVMGPNSKVISLGHVDGDA 185

Query: 184 IRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRN 243
           IRLV+ASK+WIDHNTLYRCEDGL+DVTRGSTDITISNNW RDQDKVILLGHDD Y RDRN
Sbjct: 186 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRN 245

Query: 244 MKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQG------------------------- 303
           MKVT+VYNHFGPNCNQRMPRIRYGYAHVANNLYQG                         
Sbjct: 246 MKVTVVYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 305

Query: 304 ---------KVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLR 344
                     VE AKWKFHSVRDVFENGA F +IG GRG VKPNYN  QRF V DAKW+R
Sbjct: 306 SKQVIWSTGNVEEAKWKFHSVRDVFENGALFTEIGVGRGRVKPNYNPQQRFPVADAKWIR 365

[Close]

BLAST of Csor.00g203670 vs. ExPASy TrEMBL
Match: A0A0A0LPZ1 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1)

HSP 1 Score: 585 bits (1509), Expect = 8.42e-209
Identity = 281/377 (74.54%), Postives = 314/377 (83.29%), Query Frame = 0


Query: 4   QLIILSLISLSLL--AAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMT 63
           QL +LSLIS  LL   AVS++EA  +NMNAIDRCWR NPYWRKNRQ+LA CS+GF GKMT
Sbjct: 8   QLSVLSLISFILLISTAVSYSEAHGLNMNAIDRCWRSNPYWRKNRQQLATCSVGFAGKMT 67

Query: 64  NNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYT 123
           NN+GRNL+HYQVTDPSDDP+ PRPGTLRYGATMIK KVWITF+KDMHIVL KPLL+SS+T
Sbjct: 68  NNMGRNLMHYQVTDPSDDPINPRPGTLRYGATMIKHKVWITFKKDMHIVLQKPLLVSSFT 127

Query: 124 AIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDA 183
           AIDGRG+TVHITGNACLMV RATN+IIHGLIIHHCK+QAAG+VMGP +K++SLG+VDGDA
Sbjct: 128 AIDGRGSTVHITGNACLMVVRATNIIIHGLIIHHCKSQAAGQVMGPNAKVISLGNVDGDA 187

Query: 184 IRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRN 243
           IRLV+ASK+WIDHNTLYRCEDGL+DVTRGSTDITISNNW RDQDKVILLGHDD Y RDR+
Sbjct: 188 IRLVTASKVWIDHNTLYRCEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGYVRDRS 247

Query: 244 MKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQG------------------------- 303
           M+VT++YNHFGPNCNQRMPRIRYGYAHVANNLYQG                         
Sbjct: 248 MRVTVLYNHFGPNCNQRMPRIRYGYAHVANNLYQGWTQYAIGGSMNPSVKSEANLFIASK 307

Query: 304 ---------KVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLR 344
                    KVE AKWKFHSVRD FENGASFA+IG G+G VKPNYN  QRF V DAKW+R
Sbjct: 308 SKQVIWSTGKVEEAKWKFHSVRDAFENGASFAEIGVGKGRVKPNYNPQQRFPVADAKWIR 367

[Close]

BLAST of Csor.00g203670 vs. TAIR 10
Match: AT5G09280.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 352.4 bits (903), Expect = 4.0e-97
Identity = 158/222 (71.17%), Postives = 192/222 (86.49%), Query Frame = 0


Query: 60  MTNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISS 119
           MT NIG+ +  Y+VTDPSDDPL P+PGTLRYGAT++K K WITF+++M I L+KPLLISS
Sbjct: 1   MTGNIGKGVTQYKVTDPSDDPLNPKPGTLRYGATLVKGKKWITFKRNMKIKLHKPLLISS 60

Query: 120 YTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDG 179
           +TA+DGRGA+VHI+G ACL+V RAT+VIIHGL IH CKA     VMGP SKI+ LGH+DG
Sbjct: 61  FTALDGRGASVHISGPACLIVYRATDVIIHGLKIHDCKAHPPSSVMGPDSKIIQLGHMDG 120

Query: 180 DAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRD 239
           DAIRLV+A K+WIDHNTLY CEDGL+DVT GSTD+T+SNNW R+QDKV+LLGHDD Y +D
Sbjct: 121 DAIRLVTAKKVWIDHNTLYDCEDGLLDVTLGSTDVTVSNNWFRNQDKVMLLGHDDGYVKD 180

Query: 240 RNMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQGKVENA 282
           ++M+VT+V+NHFGPNCNQRMPR+R+GYAHVANN YQG  + A
Sbjct: 181 KDMRVTVVFNHFGPNCNQRMPRVRHGYAHVANNYYQGWTQYA 222

[Close]

BLAST of Csor.00g203670 vs. TAIR 10
Match: AT1G11920.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.9e-75
Identity = 162/381 (42.52%), Postives = 214/381 (56.17%), Query Frame = 0


Query: 6   IILSLISLSLLAAVSHTEARA----------MNMNAIDRCWRPNPYWRKNRQKLALCSIG 65
           + L++ISL L AA S +   A          +  N ID CWR NPYW  NR+ LA C++G
Sbjct: 4   LFLTIISL-LFAAFSSSVVEAAYSNGYTIPKLLPNPIDSCWRRNPYWASNRRALADCAVG 63

Query: 66  FVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKPL 125
           F GK     G+    Y VT+PSDDP  PRPGTLRY     KP +WITF +DM IVL   L
Sbjct: 64  F-GKSAVG-GKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKP-LWITFARDMVIVLRNEL 123

Query: 126 LISSYTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLG 185
           +++SY  IDGRGA V I    C+ +   ++VIIHG+ IH CK   +GRV    + + S  
Sbjct: 124 IMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRK 183

Query: 186 HVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDD 245
             DGDAI +  +S IWIDH    RC+DGLIDV   ST +TISNN+    DKV+LLGH+D+
Sbjct: 184 GSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDN 243

Query: 246 YFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQ-------------------- 305
              D+ M+VT+ +NHFGP   +RMPR+R GYAHVANN Y+                    
Sbjct: 244 NVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGN 303

Query: 306 --------------GKVENA----KWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQR 339
                          ++++     +WK+ + +DVF+NGA F  + +G G V P Y   +R
Sbjct: 304 YFVASDDPSKKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYF--VPSGYGTVTPLYGRAER 363

[Close]

BLAST of Csor.00g203670 vs. TAIR 10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 274.6 bits (701), Expect = 1.1e-73
Identity = 159/382 (41.62%), Postives = 210/382 (54.97%), Query Frame = 0


Query: 1   MATQLIILSLISLSLLAAVSHT------EARAMNMNAIDRCWRPNPYWRKNRQKLALCSI 60
           MA+ ++I+SL+  +  + +  T       A  +++N ID CWR NP W  NRQ LA C++
Sbjct: 1   MASLVVIVSLLLAAFASPLLETAHSYNVTAPRVSLNPIDACWRRNPKWATNRQALAHCAV 60

Query: 61  GFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTLRYGATMIKPKVWITFQKDMHIVLNKP 120
           G+ GK     G+N   Y VT+PSD+P  P PGTLRY  +  KP +WITF +DM IVL   
Sbjct: 61  GY-GKAAIG-GKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKP-LWITFARDMVIVLKSQ 120

Query: 121 LLISSYTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSL 180
           L+I+SY  IDGRGA V I    CL + +  +VIIHG+ IH CKA   G            
Sbjct: 121 LMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNG------------ 180

Query: 181 GHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDD 240
             +DGD IR+  ++ +WIDH  L RC DGLIDV   ST +TISNN+    DKV+LLGHDD
Sbjct: 181 --MDGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDD 240

Query: 241 DYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAHVANNLYQ------------------- 300
            Y  D++M+VT+ +N FGP   +RMPR+R GYAHVANN Y+                   
Sbjct: 241 SYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEG 300

Query: 301 -------------------GKVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQ 339
                                 ++ +WK+ + RDVF NGA F   G     V+P Y   +
Sbjct: 301 NYFVAPEKRSSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFGPPGV---IVRPLYKGGE 360

[Close]

BLAST of Csor.00g203670 vs. TAIR 10
Match: AT4G22080.1 (root hair specific 14 )

HSP 1 Score: 270.4 bits (690), Expect = 2.0e-72
Identity = 147/353 (41.64%), Postives = 191/353 (54.11%), Query Frame = 0


Query: 29  MNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTL 88
           MN +D CWR    W  NR+ LA C +GF          NL  Y VT+P D+   P+PG+L
Sbjct: 46  MNPVDSCWRLKSDWAANRKDLADCVVGFGSSTLGGKKGNL--YVVTNPYDNAQNPQPGSL 105

Query: 89  RYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNVII 148
           RYG    KP +WITF KDM I L   L+++SY  IDGRGA V I    C+ +   TNVI+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLENELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 149 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 208
           HG+ IH CK    G V    + +      DGDAI +  +S IWIDH  L  C DGLIDV 
Sbjct: 166 HGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVI 225

Query: 209 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAH 268
             ST ITISNN+    DKV+LLGH+DD+ +D  MKVT+ +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 269 VANNLYQGKV------------------------ENAK-------------WKFHSVRDV 328
           VANN Y   +                         N+K             W++ + +DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNNWRWRTSKDV 345

Query: 329 FENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 345
           F+NGA F  + +G G +   Y++ QRF V     + SLT+ +G L C+    C
Sbjct: 346 FKNGAYF--VPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

[Close]

BLAST of Csor.00g203670 vs. TAIR 10
Match: AT4G22090.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-71
Identity = 143/353 (40.51%), Postives = 190/353 (53.82%), Query Frame = 0


Query: 29  MNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRPGTL 88
           MN +D CWR    W  NR+ LA C++GF          N+  Y VT+P D+   P PG+L
Sbjct: 46  MNPVDSCWRLKSDWDVNREDLADCAVGFGSSTLGGKKGNI--YVVTNPYDNAQNPHPGSL 105

Query: 89  RYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNVII 148
           RYG    KP +WITF KDM I L   L+++SY  IDGRGA V I    C+ +   TNVI+
Sbjct: 106 RYGVIQAKP-LWITFAKDMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIV 165

Query: 149 HGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVT 208
           HG+ IH CK   +G+V    + +      DGDAI +  +S +WIDH  L  C DGLIDV 
Sbjct: 166 HGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVI 225

Query: 209 RGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKVTLVYNHFGPNCNQRMPRIRYGYAH 268
             ST ITISNN+    DKV+LLGH+D++ +D  MKVT+ +NHFGP   +RMPR+R GYAH
Sbjct: 226 HASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAH 285

Query: 269 VANNLYQGKVENA-------------------------------------KWKFHSVRDV 328
           VANN Y   +  A                                      W++ +  DV
Sbjct: 286 VANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDV 345

Query: 329 FENGASFAQIGAGRGGVKPNYNALQRFLVVDAKWLRSLTSSSGALRCSPRSRC 345
           F+NGA F  + +G G +   Y++ QRF V     + SLT+ +G L C+    C
Sbjct: 346 FKNGAFF--VPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393

The following BLAST results are available for this feature:

BLAST of Csor.00g203670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65388	2.7e-74	42.52	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]
Q9C8G4	1.5e-72	41.62	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
O65456	2.8e-71	41.64	Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1	[more]
O65457	1.8e-70	40.51	Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1	[more]
Q9SVQ6	4.1e-70	42.54	Putative pectate lyase 14 OS=Arabidopsis thaliana OX=3702 GN=At4g13210 PE=3 SV=2	[more]

BLAST of Csor.00g203670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607417.1	6.82e-258	100.00	putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022997815.1	2.41e-228	88.35	putative pectate lyase 2 isoform X2 [Cucurbita maxima]	[more]
KAG7037086.1	6.05e-222	90.12	putative pectate lyase 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022923821.1	3.52e-216	76.92	putative pectate lyase 2 [Cucurbita moschata]	[more]
KAG7020030.1	5.00e-216	76.66	putative pectate lyase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g203670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KAY1	1.17e-228	88.35	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111492658 PE=3 SV=1	[more]
A0A6J1E7R9	1.70e-216	76.92	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431420 PE=3 SV=1	[more]
A0A6J1KLU6	4.66e-214	76.13	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111495358 PE=3 SV=1	[more]
A0A1S3AY18	7.83e-209	75.07	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483978 PE=3 SV=1	[more]
A0A0A0LPZ1	8.42e-209	74.54	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G031910 PE=3 SV=1	[more]

BLAST of Csor.00g203670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09280.1	4.0e-97	71.17	Pectin lyase-like superfamily protein	[more]
AT1G11920.1	1.9e-75	42.52	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	1.1e-73	41.62	Pectin lyase-like superfamily protein	[more]
AT4G22080.1	2.0e-72	41.64	root hair specific 14	[more]
AT4G22090.1	1.3e-71	40.51	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 178..199 score: 51.08 coord: 114..130 score: 51.82 coord: 77..102 score: 42.49 coord: 258..277 score: 57.62
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 106..298 e-value: 5.3E-54 score: 195.4
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 117..279 e-value: 1.1E-21 score: 77.4
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 29..337 e-value: 4.3E-78 score: 264.7
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 279..341
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 11..277
None	No IPR available	PANTHER	PTHR31683:SF74	PECTATE LYASE	coord: 279..341
None	No IPR available	PANTHER	PTHR31683:SF74	PECTATE LYASE	coord: 11..277
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 29..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g203670.m02	Csor.00g203670.m02	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity