Csor.00g203530 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACCTACTGTCCAAGCAAACCAACCAAATAATCCCTATGACTTAGATTATGACTCAGATGACGACGAATTGACTCCGGAAGAACTGAGTCGATACAATGAAGCTGCACTTGCGTCCGACGTACTATTCTTTTCAATTCTCCTTTCTAGTTTCCTACTTTTATTCTCACAATATTATTTTGTAATATTATCATATGCCACAGGGTTTTGATGTACCCACCTTACGGGATAGTTCTGAAGTTGGTCTCATTGTACCTGTATCAGAGAAATTACTATCTAAACCATATCTTCGAGAATGTGCGCAGAAGGCTATTAGTGAGTACAATATTGAAAATGTATGTATGTAACTTGGCATTTGTATTTTCTTCCATCAATAACCTTCCTAACCTCTTATTAAACTTTCTTCTATTCAGGGAACCAACTATGAGTTTGTGAAAATTGTGAAGGCTACACACCAAGCTTCCTGGGGTCTCTTATATTACATCACGTTTGATGTCAAACAAATTGGAATAGAGTTTCTAACAACAACTTTCGAAGCTAAGGTGTTACATGCGATTGATGATAGTATGGAGGTATACTTATGTAGACCAAAGCGCTCTAGTTGAGCATCTTTCTATTTTATTACATACATGTTCTCATGTAACACTTTTTTGCTTTGTGTTGTTTATCTAATTTTAGATTTATTTGGGTTGTTTATGTAATTCTATATGGAATTATGGTTTTATTTATTTGTGTTTTTTTATGGAATCATGGTTATGATTTTTATTATAGCTCTTAATTAGTTTGTTCAATATTTTTGTGTTTAAAATTTAGGTTTGGACCCTGTATTAAAAATTATAAGTTTATACCAATATCACTAAACTTATTTGGAATCTATAATAAAGTTGCATATAGGATCACTACAAATATTTATCATTACTTAATTATTTGTACAAATATTAAAATATTTTTAATTTTTATTGAATTCTTAGAGAAAATATCAAAATATTTTTTTTTTTGTGAATATTTTATTATTTATATAAATTTTGAGAGATTGATTGATTTTTAAATTTATAATAATTTAGGAACTTTTCATTTATTCCTAAATAGTTCTATTATATATAATAAATTAAGAGTATTGTTTCAAAGTTTATGTTATTTGATTCTTTTTTATTAATAAATAAAAAACTAAAAACTTAAAATTGGAGAAATAGCTTCTTAATTTATAAGCTACAATCTAATTTACTCTTAATTTATAAATATTTATTTAATAAAATATTGATTTTAGAAAAATTAACGCTTTGAAACTCAATAACCCATTTTCAAAATCTAGATGCCAGCACTCCTTGCAGATGCACCTCCTCGTCCTTGCATCGCCTTCACCTATGTCCCTAGCCACAATCCTTGCCCTGGGCATTGCTTATGCAGCTCCTTGCCGCCAGTCCTCGCACGTGCCCACGTTATTATCCACACTCCTTGCATTCGACCATTGCCTTTAGACATAGACGCATCTCCTCACCCTCGTCCTCATTGA ATGACACCTACTGTCCAAGCAAACCAACCAAATAATCCCTATGACTTAGATTATGACTCAGATGACGACGAATTGACTCCGGAAGAACTGAGTCGATACAATGAAGCTGCACTTGCGTCCGACGGTTTTGATGTACCCACCTTACGGGATAGTTCTGAAGTTGGTCTCATTGTACCTGTATCAGAGAAATTACTATCTAAACCATATCTTCGAGAATGTGCGCAGAAGGCTATTAGTGAGTACAATATTGAAAATGGAACCAACTATGAGTTTGTGAAAATTGTGAAGGCTACACACCAAGCTTCCTGGGGTCTCTTATATTACATCACGTTTGATGTCAAACAAATTGGAATAGAGTTTCTAACAACAACTTTCGAAGCTAAGGTGTTACATGCGATTGATGATAGTATGGAGATGCCAGCACTCCTTGCAGATGCACCTCCTCGTCCTTGCATCGCCTTCACCTATGTCCCTAGCCACAATCCTTGCCCTGGGCATTGCTTATGCAGCTCCTTGCCGCCAGTCCTCGCACGTGCCCACGTTATTATCCACACTCCTTGCATTCGACCATTGCCTTTAGACATAGACGCATCTCCTCACCCTCGTCCTCATTGA ATGACACCTACTGTCCAAGCAAACCAACCAAATAATCCCTATGACTTAGATTATGACTCAGATGACGACGAATTGACTCCGGAAGAACTGAGTCGATACAATGAAGCTGCACTTGCGTCCGACGGTTTTGATGTACCCACCTTACGGGATAGTTCTGAAGTTGGTCTCATTGTACCTGTATCAGAGAAATTACTATCTAAACCATATCTTCGAGAATGTGCGCAGAAGGCTATTAGTGAGTACAATATTGAAAATGGAACCAACTATGAGTTTGTGAAAATTGTGAAGGCTACACACCAAGCTTCCTGGGGTCTCTTATATTACATCACGTTTGATGTCAAACAAATTGGAATAGAGTTTCTAACAACAACTTTCGAAGCTAAGGTGTTACATGCGATTGATGATAGTATGGAGATGCCAGCACTCCTTGCAGATGCACCTCCTCGTCCTTGCATCGCCTTCACCTATGTCCCTAGCCACAATCCTTGCCCTGGGCATTGCTTATGCAGCTCCTTGCCGCCAGTCCTCGCACGTGCCCACGTTATTATCCACACTCCTTGCATTCGACCATTGCCTTTAGACATAGACGCATCTCCTCACCCTCGTCCTCATTGA MTPTVQANQPNNPYDLDYDSDDDELTPEELSRYNEAALASDGFDVPTLRDSSEVGLIVPVSEKLLSKPYLRECAQKAISEYNIENGTNYEFVKIVKATHQASWGLLYYITFDVKQIGIEFLTTTFEAKVLHAIDDSMEMPALLADAPPRPCIAFTYVPSHNPCPGHCLCSSLPPVLARAHVIIHTPCIRPLPLDIDASPHPRPH Homology
BLAST of Csor.00g203530 vs. NCBI nr
Match: KAG6607430.1 (hypothetical protein SDJN03_00772, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 417 bits (1072), Expect = 3.43e-147 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of Csor.00g203530 vs. NCBI nr
Match: KAG6607422.1 (hypothetical protein SDJN03_00764, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 335 bits (858), Expect = 1.16e-114 Identity = 172/204 (84.31%), Postives = 180/204 (88.24%), Query Frame = 0
BLAST of Csor.00g203530 vs. NCBI nr
Match: XP_023525978.1 (uncharacterized protein LOC111789436 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 273 bits (699), Expect = 3.45e-91 Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of Csor.00g203530 vs. NCBI nr
Match: KAG6607423.1 (hypothetical protein SDJN03_00765, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 271 bits (693), Expect = 4.15e-89 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of Csor.00g203530 vs. NCBI nr
Match: XP_022948409.1 (uncharacterized protein LOC111452100 [Cucurbita moschata]) HSP 1 Score: 267 bits (682), Expect = 1.34e-88 Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0
BLAST of Csor.00g203530 vs. ExPASy TrEMBL
Match: A0A6J1G9T9 (uncharacterized protein LOC111452100 OS=Cucurbita moschata OX=3662 GN=LOC111452100 PE=4 SV=1) HSP 1 Score: 267 bits (682), Expect = 6.49e-89 Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0
BLAST of Csor.00g203530 vs. ExPASy TrEMBL
Match: A0A6J1CAH1 (uncharacterized protein LOC111008920 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008920 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.13e-19 Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 0
BLAST of Csor.00g203530 vs. ExPASy TrEMBL
Match: A0A6J1C8H7 (uncharacterized protein LOC111008952 OS=Momordica charantia OX=3673 GN=LOC111008952 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 7.21e-17 Identity = 48/114 (42.11%), Postives = 72/114 (63.16%), Query Frame = 0
BLAST of Csor.00g203530 vs. ExPASy TrEMBL
Match: A0A6J1FPD6 (UPF0725 protein At4g29550-like OS=Cucurbita moschata OX=3662 GN=LOC111447608 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.39e-16 Identity = 52/113 (46.02%), Postives = 63/113 (55.75%), Query Frame = 0
BLAST of Csor.00g203530 vs. ExPASy TrEMBL
Match: A0A6J1IJT3 (uncharacterized protein LOC111475320 OS=Cucurbita maxima OX=3661 GN=LOC111475320 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.20e-15 Identity = 54/115 (46.96%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of Csor.00g203530 vs. TAIR 10
Match: AT1G63200.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 57.0 bits (136), Expect = 2.1e-08 Identity = 40/126 (31.75%), Postives = 63/126 (50.00%), Query Frame = 0
BLAST of Csor.00g203530 vs. TAIR 10
Match: AT1G63190.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 56.6 bits (135), Expect = 2.7e-08 Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 0
BLAST of Csor.00g203530 vs. TAIR 10
Match: AT2G37435.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06 Identity = 29/104 (27.88%), Postives = 53/104 (50.96%), Query Frame = 0
BLAST of Csor.00g203530 vs. TAIR 10
Match: AT1G63206.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 4.0e-04 Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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