Csor.00g203280 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g203280
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Csor_Chr01: 4519098 .. 4520003 (-)
RNA-Seq Expression	Csor.00g203280
Synteny	Csor.00g203280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATTGTCATGATCCAGGCTTCGGCTGCTGTCTTCCGGCCGAGCGCGTCAAGATCGAGGTTCCTTTCGGGGTCGTCGGGAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTCTAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGCTCCCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGGTATTTGATTATATGATATCAAACACAAGAGATTGAGATTTGAATTTAACAAATTTGGAAAACTTTCTGTTTGCAGTCTTCCAGGTGACAATGGGTTTGATCCTTTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTTGTGAACGGCCGATGGGCAATGCTTGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTATGGAATCATCAACGTACCAAAATGGTACGATGCGGGGAAAGCCGAGTATTTTGCATCGTCGTCGACTCTCTTTGTGATCGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAAGCCAAGGAAAAGGAGATTGCTAATGGTAAATAGAACAAACTAGCTAATCAAATTGCTCAATTACATGTCTAACGATGAAACTAATCAAGTTTTGATCATTTACAGGAAGATTGGCAATGTTGGCATTCTTGGGATTCATCATTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCATATATATCAGATCCATGGCACAACACTATTGTCCAAACGCTAA

mRNA sequence

ATGTCAATTGTCATGATCCAGGCTTCGGCTGCTGTCTTCCGGCCGAGCGCGTCAAGATCGAGGTTCCTTTCGGGGTCGTCGGGAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTCTAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGCTCCCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGTCTTCCAGGTGACAATGGGTTTGATCCTTTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTTGTGAACGGCCGATGGGCAATGCTTGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTATGGAATCATCAACGTACCAAAATGGTACGATGCGGGGAAAGCCGAGTATTTTGCATCGTCGTCGACTCTCTTTGTGATCGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAAGCCAAGGAAAAGGAGATTGCTAATGGAAGATTGGCAATGTTGGCATTCTTGGGATTCATCATTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCATATATATCAGATCCATGGCACAACACTATTGTCCAAACGCTAA

Coding sequence (CDS)

ATGTCAATTGTCATGATCCAGGCTTCGGCTGCTGTCTTCCGGCCGAGCGCGTCAAGATCGAGGTTCCTTTCGGGGTCGTCGGGAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTCTAGTTCCCAGTTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGCTCCCAGGTTTGCCATCCCCAGCTTACCTTGATGGCAGTCTTCCAGGTGACAATGGGTTTGATCCTTTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTTGTGAACGGCCGATGGGCAATGCTTGGAGTTGCAGGTATGCTATTGCCTGAAGTCTTCACAAGTTATGGAATCATCAACGTACCAAAATGGTACGATGCGGGGAAAGCCGAGTATTTTGCATCGTCGTCGACTCTCTTTGTGATCGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAACCAACTCTTGAAGCCAAGGAAAAGGAGATTGCTAATGGAAGATTGGCAATGTTGGCATTCTTGGGATTCATCATTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCATATATATCAGATCCATGGCACAACACTATTGTCCAAACGCTAA

Protein sequence

MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTLLSKR

Homology

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BLAST of Csor.00g203280 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.9e-114
Identity = 200/237 (84.39%), Postives = 209/237 (88.19%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           M+ V  QASAA+F P   +SRFL GSSGK NR ++ +P      +SFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
            SP YL GSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  ASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  
Sbjct: 121 INVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAG 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 238
           +VGYPGGIFNPLNF PTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN LQHI
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHI 237

[Close]

BLAST of Csor.00g203280 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.7e-110
Identity = 192/238 (80.67%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPT-TSLVPSSFKVEAKKGEWLPG 60
           M+ V   ASA++FRP  S+ RFL+GSSG+ NR LS     +S   SSFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNGRWAMLGVAGMLLPEVFT  G
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 180
           IINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 238
            +VGYPGGIFNPLNF PT EAKEKE+ANGRLAMLAFLGF++QHNVTGKGPF+N LQH+
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHL 238

[Close]

BLAST of Csor.00g203280 vs. ExPASy Swiss-Prot
Match: Q36718 (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.0e-78
Identity = 142/213 (66.67%), Postives = 164/213 (77.00%), Query Frame = 0


Query: 29  KFNRALSVKPTTSLVPSSFKVEA---KKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDP 88
           +F   +   P  S  P S + +     KG WLPGL SPAYLDGSL GDNGFDPL LAEDP
Sbjct: 6   RFRTRVPPSPAASGSPRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDP 65

Query: 89  ENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYD-AGKAEYFASSSTLFVI 148
           E+LRW+VQA++VNGRWAMLGVAGML+PEV T  G++N P+W    GK  YFASSST   +
Sbjct: 66  EDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRV 125

Query: 149 EFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKE 208
             +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP++ GYPG +FNPLNF P LE KEKE
Sbjct: 126 H-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAP-LENKEKE 185

Query: 209 IANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 238
           +ANGRLAMLAFLGF++QHNV GKGPF+N  QH+
Sbjct: 186 LANGRLAMLAFLGFLVQHNVHGKGPFENLQQHL 216

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BLAST of Csor.00g203280 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.4e-58
Identity = 110/227 (48.46%), Postives = 142/227 (62.56%), Query Frame = 0


Query: 17  ASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGF 76
           A+++ FL G   + ++ ++   + S+  S+   +  +  W PG   P +LDGSLPGD GF
Sbjct: 29  ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGF 88

Query: 77  DPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFA 136
           DPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  T  G++N P WY AG+ EYF 
Sbjct: 89  DPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT 148

Query: 137 SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF- 196
            ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL + 
Sbjct: 149 DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208

Query: 197 ----EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 238
                   E + KEI NGRLAMLA +G   QH  TG GP DN   H+
Sbjct: 209 SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL 255

[Close]

BLAST of Csor.00g203280 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.5e-58
Identity = 119/245 (48.57%), Postives = 148/245 (60.41%), Query Frame = 0


Query: 2   SIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGE---WLP 61
           S+    A AA+  PS     FL G   +  + L+V P  S   +S +  A   +   W P
Sbjct: 4   SLCASSAIAAISSPS-----FLGGKKLRLKKKLTV-PAVSRPDASVRAVAADPDRPIWFP 63

Query: 62  GLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSY 121
           G   P +LDGSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG AG+ +PE  T  
Sbjct: 64  GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKI 123

Query: 122 GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 181
           GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L 
Sbjct: 124 GILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLT 183

Query: 182 PNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 238
             DVGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH  TG GP DN
Sbjct: 184 GTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDN 242

[Close]

BLAST of Csor.00g203280 vs. NCBI nr
Match: KAG6607455.1 (Chlorophyll a-b binding protein P4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 507 bits (1305), Expect = 3.26e-181
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQI 240
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQI
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQI 240

Query: 241 HGTTLLSKR 249
           HGTTLLSKR
Sbjct: 241 HGTTLLSKR 249

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BLAST of Csor.00g203280 vs. NCBI nr
Match: KAG7037112.1 (Chlorophyll a-b binding protein P4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 494 bits (1271), Expect = 5.40e-172
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 6   IQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAY 65
           I+ASAAVF PSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAY
Sbjct: 268 IKASAAVFWPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAY 327

Query: 66  LDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPK 125
           LDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPK
Sbjct: 328 LDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPK 387

Query: 126 WYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYP 185
           WYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYP
Sbjct: 388 WYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYP 447

Query: 186 GGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTL 245
           GGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTL
Sbjct: 448 GGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHIYQIHGTTL 507

Query: 246 LSKR 249
           LSKR
Sbjct: 508 LSKR 511

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BLAST of Csor.00g203280 vs. NCBI nr
Match: XP_022949090.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 481 bits (1237), Expect = 8.17e-171
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           MSIVMIQASAAVFRPSASRSRFL GSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLLGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237

[Close]

BLAST of Csor.00g203280 vs. NCBI nr
Match: XP_022998805.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 479 bits (1234), Expect = 2.34e-170
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSNGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237

[Close]

BLAST of Csor.00g203280 vs. NCBI nr
Match: XP_023524863.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479 bits (1233), Expect = 3.33e-170
Identity = 235/237 (99.16%), Postives = 235/237 (99.16%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTS VPSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSSVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
           PSP YLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI
Sbjct: 61  PSPVYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237

[Close]

BLAST of Csor.00g203280 vs. ExPASy TrEMBL
Match: A0A6J1GBT1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452545 PE=3 SV=1)

HSP 1 Score: 481 bits (1237), Expect = 3.96e-171
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           MSIVMIQASAAVFRPSASRSRFL GSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLLGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237

[Close]

BLAST of Csor.00g203280 vs. ExPASy TrEMBL
Match: A0A6J1KDI3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493358 PE=3 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 1.13e-170
Identity = 236/237 (99.58%), Postives = 236/237 (99.58%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL
Sbjct: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
           PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSNGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237

[Close]

BLAST of Csor.00g203280 vs. ExPASy TrEMBL
Match: A0A0A0LTE5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G033310 PE=3 SV=1)

HSP 1 Score: 458 bits (1178), Expect = 3.76e-162
Identity = 219/237 (92.41%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           M+ V+ QASA VFRP ASRSRFLSGSSGKFNRALSVKPTTS +P++FKVEAKKGEWLPGL
Sbjct: 1   MATVITQASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
           PSP YLDGSLPGDNGFDPLGLAEDPENLRWY QAELVNGRWAMLGVAGM+LPEV T+YGI
Sbjct: 61  PSPTYLDGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237
           DVGYPGGIFNPLNFEPTLEA+EKEIANGRLAMLAFLGFI+QHNVTGKGPFDNF+QHI
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAREKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFMQHI 237

[Close]

BLAST of Csor.00g203280 vs. ExPASy TrEMBL
Match: A0A6J1C5V9 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008702 PE=3 SV=1)

HSP 1 Score: 456 bits (1173), Expect = 2.25e-161
Identity = 223/237 (94.09%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           M+  M QASAAVFRP ASRSRFLSGSSGKFNRALSVKPT S +P  FKVEAKKGEWLPGL
Sbjct: 1   MATAMTQASAAVFRPCASRSRFLSGSSGKFNRALSVKPTASSLPCYFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
           PSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTS GI
Sbjct: 61  PSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSIGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPN
Sbjct: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKXYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237
           DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHI
Sbjct: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHI 237

[Close]

BLAST of Csor.00g203280 vs. ExPASy TrEMBL
Match: A0A2C9UJS9 (Chlorophyll a-b binding protein, chloroplastic OS=Manihot esculenta OX=3983 GN=MANES_14G079800 PE=3 SV=1)

HSP 1 Score: 432 bits (1112), Expect = 4.62e-152
Identity = 207/237 (87.34%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGL 60
           M+ V  QASAAVFRP ASRSRFL+GSSGK NR +S KP  S   +SFKVEAKKGEWLPGL
Sbjct: 1   MATVTTQASAAVFRPCASRSRFLTGSSGKLNREVSFKPIASSSSASFKVEAKKGEWLPGL 60

Query: 61  PSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGI 120
           PSPAYL+GSLPGDNGFDPLGLAEDPENL+W++QAELVNGRWAMLGVAGMLLPEVFT  GI
Sbjct: 61  PSPAYLNGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLLPEVFTKIGI 120

Query: 121 INVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180
           INVP+WYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN
Sbjct: 121 INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN 180

Query: 181 DVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 237
           +VGYPGGIFNPLNF PTLEAKEKE+ANGRLAMLAFLGF++QHNVTGKGPFDN LQH+
Sbjct: 181 EVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFDNLLQHL 237

[Close]

BLAST of Csor.00g203280 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 400.2 bits (1027), Expect = 1.2e-111
Identity = 192/238 (80.67%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 1   MSIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPT-TSLVPSSFKVEAKKGEWLPG 60
           M+ V   ASA++FRP  S+ RFL+GSSG+ NR LS     +S   SSFKVEAKKGEWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 61  LPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYG 120
           L SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNGRWAMLGVAGMLLPEVFT  G
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 121 IINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPP 180
           IINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 181 NDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHI 238
            +VGYPGGIFNPLNF PT EAKEKE+ANGRLAMLAFLGF++QHNVTGKGPF+N LQH+
Sbjct: 181 GEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHL 238

[Close]

BLAST of Csor.00g203280 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 225.3 bits (573), Expect = 5.3e-59
Identity = 119/245 (48.57%), Postives = 148/245 (60.41%), Query Frame = 0


Query: 2   SIVMIQASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGE---WLP 61
           S+    A AA+  PS     FL G   +  + L+V P  S   +S +  A   +   W P
Sbjct: 4   SLCASSAIAAISSPS-----FLGGKKLRLKKKLTV-PAVSRPDASVRAVAADPDRPIWFP 63

Query: 62  GLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSY 121
           G   P +LDGSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAMLG AG+ +PE  T  
Sbjct: 64  GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKI 123

Query: 122 GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 181
           GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L 
Sbjct: 124 GILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLT 183

Query: 182 PNDVGYPGGI-FNPLNF-----EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN 238
             DVGYPGG+ F+PL +         E + KEI NGRLAMLA +G   QH  TG GP DN
Sbjct: 184 GTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDN 242

[Close]

BLAST of Csor.00g203280 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 201.8 bits (512), Expect = 6.3e-52
Identity = 93/188 (49.47%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 56  WLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVF 115
           W PG   P +LDGSLPGD GFDPLGL  DP+ L+W+ QAEL++ RWAML V G+++PE  
Sbjct: 68  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECL 127

Query: 116 TSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQY 175
              G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +   
Sbjct: 128 ERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHK 187

Query: 176 SLPPNDVGYPGGIFNPLNF------EPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGP 235
             P  DVGYPGG++           EP +  + KEI NGRLAMLAFLGF  Q   T + P
Sbjct: 188 VNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDP 247

Query: 236 FDNFLQHI 238
            +N + H+
Sbjct: 248 IENLMAHL 255

[Close]

BLAST of Csor.00g203280 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-50
Identity = 97/198 (48.99%), Postives = 134/198 (67.68%), Query Frame = 0


Query: 49  VEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAG 108
           V  ++  WLPGL  P YLDG+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG
Sbjct: 42  VAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAG 101

Query: 109 MLLPEVFTSYGIINVPKWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 168
           +L  ++  + GI N+P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  
Sbjct: 102 ILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQA 161

Query: 169 QDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFI 228
           ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LGF 
Sbjct: 162 KEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFF 221

Query: 229 IQHNVTGKGPFDNFLQHI 238
           +Q +VT  GP DN ++H+
Sbjct: 222 VQASVTHTGPIDNLVEHL 239

[Close]

BLAST of Csor.00g203280 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-50
Identity = 97/198 (48.99%), Postives = 134/198 (67.68%), Query Frame = 0


Query: 49  VEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAG 108
           V  ++  WLPGL  P YLDG+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG
Sbjct: 42  VAVERATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAG 101

Query: 109 MLLPEVFTSYGIINVPKWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVN 168
           +L  ++  + GI N+P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PGS  
Sbjct: 102 ILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQA 161

Query: 169 QDPIF---KQYSLPPNDVGYPGG-IFNPLNFEPTLEA----KEKEIANGRLAMLAFLGFI 228
           ++  F    + +L   + GYPGG + NPL     ++     K KEI NGRLAM+A LGF 
Sbjct: 162 KEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFF 221

Query: 229 IQHNVTGKGPFDNFLQHI 238
           +Q +VT  GP DN ++H+
Sbjct: 222 VQASVTHTGPIDNLVEHL 239

The following BLAST results are available for this feature:

BLAST of Csor.00g203280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQL2	1.9e-114	84.39	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
P27521	1.7e-110	80.67	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q36718	5.0e-78	66.67	Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulga...	[more]
P13869	3.4e-58	48.46	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
Q9SYW8	7.5e-58	48.57	Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th...	[more]

BLAST of Csor.00g203280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607455.1	3.26e-181	100.00	Chlorophyll a-b binding protein P4, chloroplastic, partial [Cucurbita argyrosper...	[more]
KAG7037112.1	5.40e-172	99.18	Chlorophyll a-b binding protein P4, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_022949090.1	8.17e-171	99.58	chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata]	[more]
XP_022998805.1	2.34e-170	99.58	chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima]	[more]
XP_023524863.1	3.33e-170	99.16	chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]

BLAST of Csor.00g203280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBT1	3.96e-171	99.58	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KDI3	1.13e-170	99.58	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0LTE5	3.76e-162	92.41	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1C5V9	2.25e-161	94.09	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A2C9UJS9	4.62e-152	87.34	Chlorophyll a-b binding protein, chloroplastic OS=Manihot esculenta OX=3983 GN=M...	[more]

BLAST of Csor.00g203280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47470.1	1.2e-111	80.67	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT3G61470.1	5.3e-59	48.57	photosystem I light harvesting complex gene 2	[more]
AT1G19150.1	6.3e-52	49.47	photosystem I light harvesting complex gene 6	[more]
AT1G45474.1	2.7e-50	48.99	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	2.7e-50	48.99	photosystem I light harvesting complex gene 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 63..222 e-value: 4.0E-49 score: 167.2
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 63..241 e-value: 2.1E-63 score: 215.7
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..243
None	No IPR available	PANTHER	PTHR21649:SF109	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 1..243
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 53..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g203280.m01	Csor.00g203280.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009409	response to cold
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009645	response to low light intensity stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding