Csor.00g201370 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g201370
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionpolyamine-modulated factor 1-binding protein 1
LocationCsor_Chr14: 10103532 .. 10103864 (-)
RNA-Seq ExpressionCsor.00g201370
SyntenyCsor.00g201370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTTGGAGCTCTGGTTCAGGCTAAAGAGGGTTTGGAGCTCGACTTGAAGAAGAATGTTGACGAGAAGAAACAGAGTCAAATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGCGAGTGAAGAATGTGGAGAATGGGAGATTGAAAGATGAGAATAATGGGCTTGTTTTGAAAGTTGAGGGAGAGAGGGAGGAATGGATGAAGGTTTGTTGTGAGAGGGATGGAATTAAGGCTGATTTTGATGGATGGTTTGAGGAATCGGGGGATTTGAGAAGAAAAATGACTAAAAGGAGAAGAATGCAAAAGGGCTTTGGTTGA

mRNA sequence

ATGGAGTTTGGAGCTCTGGTTCAGGCTAAAGAGGGTTTGGAGCTCGACTTGAAGAAGAATGTTGACGAGAAGAAACAGAGTCAAATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGCGAGTGAAGAATGTGGAGAATGGGAGATTGAAAGATGAGAATAATGGGCTTGTTTTGAAAGTTGAGGGAGAGAGGGAGGAATGGATGAAGGTTTGTTGTGAGAGGGATGGAATTAAGGCTGATTTTGATGGATGGTTTGAGGAATCGGGGGATTTGAGAAGAAAAATGACTAAAAGGAGAAGAATGCAAAAGGGCTTTGGTTGA

Coding sequence (CDS)

ATGGAGTTTGGAGCTCTGGTTCAGGCTAAAGAGGGTTTGGAGCTCGACTTGAAGAAGAATGTTGACGAGAAGAAACAGAGTCAAATGGATGAAGTGGGAGATAGGATTTGTAGGTTAGTTGAGAGTGAGCGAGTGAAGAATGTGGAGAATGGGAGATTGAAAGATGAGAATAATGGGCTTGTTTTGAAAGTTGAGGGAGAGAGGGAGGAATGGATGAAGGTTTGTTGTGAGAGGGATGGAATTAAGGCTGATTTTGATGGATGGTTTGAGGAATCGGGGGATTTGAGAAGAAAAATGACTAAAAGGAGAAGAATGCAAAAGGGCTTTGGTTGA

Protein sequence

MEFGALVQAKEGLELDLKKNVDEKKQSQMDEVGDRICRLVESERVKNVENGRLKDENNGLVLKVEGEREEWMKVCCERDGIKADFDGWFEESGDLRRKMTKRRRMQKGFG
Homology
BLAST of Csor.00g201370 vs. NCBI nr
Match: KAG6581692.1 (hypothetical protein SDJN03_21694, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218 bits (555), Expect = 2.02e-71
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1   MEFGALVQAKEGLELDLKKNVDEKKQSQMDEVGDRICRLVESERVKNVENGRLKDENNGL 60
           MEFGALVQAKEGLELDLKKNVDEKKQSQMDEVGDRICRLVESERVKNVENGRLKDENNGL
Sbjct: 1   MEFGALVQAKEGLELDLKKNVDEKKQSQMDEVGDRICRLVESERVKNVENGRLKDENNGL 60

Query: 61  VLKVEGEREEWMKVCCERDGIKADFDGWFEESGDLRRKMTKRRRMQKGFG 110
           VLKVEGEREEWMKVCCERDGIKADFDGWFEESGDLRRKMTKRRRMQKGFG
Sbjct: 61  VLKVEGEREEWMKVCCERDGIKADFDGWFEESGDLRRKMTKRRRMQKGFG 110

BLAST of Csor.00g201370 vs. NCBI nr
Match: XP_023514497.1 (uncharacterized protein LOC111778756 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182 bits (461), Expect = 2.22e-54
Identity = 93/107 (86.92%), Postives = 99/107 (92.52%), Query Frame = 0

Query: 2   EFGALVQAKEGLELDLKKNVDEKKQSQMDEVGDRICRLVESERVKNVENGRLKDENNGLV 61
           EFGALVQAKEGLELDLKKN D+KKQSQMDE+GDRICRLV SERVKNVE  RLKDENNGLV
Sbjct: 76  EFGALVQAKEGLELDLKKNADQKKQSQMDEMGDRICRLVGSERVKNVEIVRLKDENNGLV 135

Query: 62  LKVEGEREEWMKVCCERDGIKADFDGWFEESGDLRRKMTKRRRMQKG 108
           LKVE ERE+WMKVCC+RDGIKADFDGW EE GDLRRKM +RRRM+KG
Sbjct: 136 LKVEEEREKWMKVCCKRDGIKADFDGWLEELGDLRRKMDERRRMRKG 182

BLAST of Csor.00g201370 vs. NCBI nr
Match: XP_022971792.1 (protein MNN4-like [Cucurbita maxima])

HSP 1 Score: 151 bits (381), Expect = 2.91e-43
Identity = 81/107 (75.70%), Postives = 93/107 (86.92%), Query Frame = 0

Query: 2   EFGALVQAKEGLELDLKKNVDEKKQSQMDEVGDRICRLVESERVKNVENGRLKDENNGLV 61
           +FGALVQ KEGLELDLKKN D+KKQ+QM+EVGDRICRLVESER+KNVE  RLKD+NNGLV
Sbjct: 71  KFGALVQVKEGLELDLKKNADKKKQNQMNEVGDRICRLVESERLKNVEIERLKDKNNGLV 130

Query: 62  LKVEGEREEWMKVCCERDGIKADFDG-WFEESGDLRRKMTKRRRMQK 107
           LKVE ERE+WMKVCCERDGIKA+ D   FEES DLR+KM +  + +K
Sbjct: 131 LKVEEEREKWMKVCCERDGIKANSDDELFEESRDLRKKMIELEKNEK 177

BLAST of Csor.00g201370 vs. NCBI nr
Match: KAG6571252.1 (hypothetical protein SDJN03_30167, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147 bits (370), Expect = 5.02e-43
Identity = 79/99 (79.80%), Postives = 83/99 (83.84%), Query Frame = 0

Query: 1  MEFGALVQAKEGLELDLKKNVDEKKQSQMDEVGDRICRLVESERVKNVENGRLKDENNGL 60
          ME  ALVQAKEGLELDLKKN DEKKQSQMD VGDRICRL ESER+KNVE  RLKDENN L
Sbjct: 1  MELRALVQAKEGLELDLKKNADEKKQSQMDGVGDRICRLFESERLKNVEIERLKDENNAL 60

Query: 61 VLKVEGEREEWMKVCCERDGIKADFDGWFEESGDLRRKM 99
          VLKVE ERE+WM VCCERDGIKA+  G  EE GDL +KM
Sbjct: 61 VLKVEEEREKWMNVCCERDGIKANSYGLLEEIGDLIKKM 99

BLAST of Csor.00g201370 vs. NCBI nr
Match: KAG6581690.1 (hypothetical protein SDJN03_21692, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 143 bits (361), Expect = 6.37e-42
Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 0

Query: 29  MDEVGDRICRLVESERVKNVENGRLKDENNGLVLKVEGEREEWMKVCCERDGIKADFDGW 88
           MDE+GDRICRLVESERVKNVE  RLKDENNGLVLKVE ERE+WM VCC+RDGIKADFDGW
Sbjct: 1   MDEMGDRICRLVESERVKNVEIVRLKDENNGLVLKVEEEREKWMMVCCKRDGIKADFDGW 60

Query: 89  FEESGDLRRKMTKRRRMQKG 108
           FEESGDLRRKM +RRRM+KG
Sbjct: 61  FEESGDLRRKMDERRRMRKG 80

BLAST of Csor.00g201370 vs. ExPASy TrEMBL
Match: A0A6J1I2X9 (protein MNN4-like OS=Cucurbita maxima OX=3661 GN=LOC111470470 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 1.41e-43
Identity = 81/107 (75.70%), Postives = 93/107 (86.92%), Query Frame = 0

Query: 2   EFGALVQAKEGLELDLKKNVDEKKQSQMDEVGDRICRLVESERVKNVENGRLKDENNGLV 61
           +FGALVQ KEGLELDLKKN D+KKQ+QM+EVGDRICRLVESER+KNVE  RLKD+NNGLV
Sbjct: 71  KFGALVQVKEGLELDLKKNADKKKQNQMNEVGDRICRLVESERLKNVEIERLKDKNNGLV 130

Query: 62  LKVEGEREEWMKVCCERDGIKADFDG-WFEESGDLRRKMTKRRRMQK 107
           LKVE ERE+WMKVCCERDGIKA+ D   FEES DLR+KM +  + +K
Sbjct: 131 LKVEEEREKWMKVCCERDGIKANSDDELFEESRDLRKKMIELEKNEK 177

BLAST of Csor.00g201370 vs. ExPASy TrEMBL
Match: A0A6J1FD80 (polyamine-modulated factor 1-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111444320 PE=4 SV=1)

HSP 1 Score: 153 bits (386), Expect = 2.61e-41
Identity = 86/126 (68.25%), Postives = 91/126 (72.22%), Query Frame = 0

Query: 2   EFGALVQAKEGLELDLKKNVDEKKQ---------------------------SQMDEVGD 61
           EFGALVQAKEGLELDLKKN DEKKQ                           +QM+E+G 
Sbjct: 64  EFGALVQAKEGLELDLKKNADEKKQVMCELSVACDGVSGLELERNVVHVYLQTQMEEMGG 123

Query: 62  RICRLVESERVKNVENGRLKDENNGLVLKVEGEREEWMKVCCERDGIKADFDGWFEESGD 100
            ICRLVESERVKNVE GRLK ENNGLVLKVE ERE+WMKVCCERDGIKADFDG FEE+GD
Sbjct: 124 VICRLVESERVKNVEIGRLKGENNGLVLKVEEEREKWMKVCCERDGIKADFDGLFEETGD 183

BLAST of Csor.00g201370 vs. ExPASy TrEMBL
Match: A0A6J1HKX2 (polyamine-modulated factor 1-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111465485 PE=4 SV=1)

HSP 1 Score: 145 bits (366), Expect = 1.79e-38
Identity = 83/126 (65.87%), Postives = 88/126 (69.84%), Query Frame = 0

Query: 2   EFGALVQAKEGLELDLKKNVDEKKQ---------------------------SQMDEVGD 61
           EFGALVQAKEGLELDLKKN DEKKQ                           +QM+E+G 
Sbjct: 63  EFGALVQAKEGLELDLKKNADEKKQVMCELSVACDGVSGLELEKNVVHVYLQTQMEEMGG 122

Query: 62  RICRLVESERVKNVENGRLKDENNGLVLKVEGEREEWMKVCCERDGIKADFDGWFEESGD 100
            ICRLVESER KNVE GRLK ENNGLVLK E ERE+WMKVC ERDGIKADFDG FEE+GD
Sbjct: 123 VICRLVESEREKNVEIGRLKGENNGLVLKAEEEREKWMKVCSERDGIKADFDGLFEETGD 182

BLAST of Csor.00g201370 vs. ExPASy TrEMBL
Match: A0A6J1I9J8 (uncharacterized protein LOC111470467 OS=Cucurbita maxima OX=3661 GN=LOC111470467 PE=4 SV=1)

HSP 1 Score: 130 bits (326), Expect = 2.33e-35
Identity = 66/93 (70.97%), Postives = 79/93 (84.95%), Query Frame = 0

Query: 15  LDLKKNVDEKKQSQMDEVGDRICRLVESERVKNVENGRLKDENNGLVLKVEGEREEWMKV 74
           +DLKKN DEKK SQMDEVGDRICRLVESER+KNV+ GRLKDENNGLVLKVE ERE+W+KV
Sbjct: 2   VDLKKNADEKKHSQMDEVGDRICRLVESERLKNVDIGRLKDENNGLVLKVEEEREKWLKV 61

Query: 75  CCERDGIKADFDGWFEESGDLRRKMTKRRRMQK 107
           C ERD I+ ++DG F+E  DLR+KM +  + +K
Sbjct: 62  CWERDEIEDNYDGLFKEIRDLRKKMIEMEKNEK 94

BLAST of Csor.00g201370 vs. ExPASy TrEMBL
Match: A0A6J1DBU6 (myosin-2 heavy chain, non muscle-like OS=Momordica charantia OX=3673 GN=LOC111018880 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.39e-21
Identity = 65/136 (47.79%), Postives = 79/136 (58.09%), Query Frame = 0

Query: 1   MEFGALVQAKEGLELDLKKNVDEKKQ---------------------------SQMDEVG 60
           ME GALV+ K+ LE+DLK+NVDEK Q                           SQM+E+G
Sbjct: 60  MEVGALVKTKDALEIDLKRNVDEKNQVMGELGEACEGIYGLDLEKNVVSVFLQSQMEEMG 119

Query: 61  DRICRLV----ESERVKNVENGRLKDENNGLVLKVEGEREEWMKVCCERDGIKADFDGWF 105
             IC L+    ESER+K +E G LK E N LVLKVE ERE+W +V  ERD +K  FDG  
Sbjct: 120 GGICGLMAEKRESERLKEMEIGLLKAEVNELVLKVEEEREKWRRVRSERDAMKIAFDGLL 179

BLAST of Csor.00g201370 vs. TAIR 10
Match: AT5G27330.1 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 48.5 bits (114), Expect = 3.9e-06
Identity = 37/133 (27.82%), Postives = 61/133 (45.86%), Query Frame = 0

Query: 5   ALVQAKEGLELDLKKNVDEKK---------------------------QSQMDEVGDRIC 64
           +L QAK+ LE++L ++  EK                            + ++ E+G  + 
Sbjct: 74  SLFQAKDSLEIELVRSGKEKTLLREELCGSSDENFMLKIEMDLLMGFVEGRVKEMGVEVD 133

Query: 65  RLVESERVKNVENGRLKDENNGLVLKVEGEREEWMKVCCERDGIKADFDGWFEESGDLRR 111
            L + +  +  E   LK E NGL+ K+E EREE+ +VC ERD +K+ FD   EE   L+ 
Sbjct: 134 WLFKEKSDRETEIRDLKREANGLIRKLESEREEFSRVCDERDLVKSGFDLQSEEMNLLKE 193

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6581692.12.02e-71100.00hypothetical protein SDJN03_21694, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023514497.12.22e-5486.92uncharacterized protein LOC111778756 [Cucurbita pepo subsp. pepo][more]
XP_022971792.12.91e-4375.70protein MNN4-like [Cucurbita maxima][more]
KAG6571252.15.02e-4379.80hypothetical protein SDJN03_30167, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6581690.16.37e-4287.50hypothetical protein SDJN03_21692, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1I2X91.41e-4375.70protein MNN4-like OS=Cucurbita maxima OX=3661 GN=LOC111470470 PE=4 SV=1[more]
A0A6J1FD802.61e-4168.25polyamine-modulated factor 1-binding protein 1 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1HKX21.79e-3865.87polyamine-modulated factor 1-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1I9J82.33e-3570.97uncharacterized protein LOC111470467 OS=Cucurbita maxima OX=3661 GN=LOC111470467... [more]
A0A6J1DBU61.39e-2147.79myosin-2 heavy chain, non muscle-like OS=Momordica charantia OX=3673 GN=LOC11101... [more]
Match NameE-valueIdentityDescription
AT5G27330.13.9e-0627.82Prefoldin chaperone subunit family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g201370.m01Csor.00g201370.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane