Csor.00g199190 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g199190
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	IBR domain containing protein
Location	Csor_Chr03: 4362931 .. 4363440 (+)
RNA-Seq Expression	Csor.00g199190
Synteny	Csor.00g199190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTGTGAAACCTCCGATTATCCTCCAAAATCGCTTCAATTCAAGCACAACGACAAATTCTTCTCCAAGCTTCTCACCAGAGAAAGTTCTAGAGCCAATCACTCTTCTAGAATCTACTATGGCGGATTGGCCGGTGCTGTTCCTTTCGTTTGGGAGTCTCAGCCAGGTACGCCTCTTCACCGATTTTCCGATGATCTAACTCCTCCTCTCACTCCTCCTCCTTCTTACTTTTCTCATTCTCTTCAAAAACCGCCAAAAAACCGCTCCAAATCGCTCTCTCTTTTCCATATCTTCTTCAATCATAAGAGGAAACTCGATCTGTTGACGCCGCCGGTTTCCAAATCGGCGTCATTGCCGTCTTCCGGATCGATGTTCGATTCGGCCGTCGGTGCGAAGTTCGCCGGACGCCGTTCGGCGCGGCGGTTTGTGCCTGGAGTCTCGCGTTCGAAGGAGGGAGAGGATGCGGCGGCCTCCGGCTCAGTGCTTTGTTTCGGAATCGGTAGGTGA

mRNA sequence

ATGCTCTGTGAAACCTCCGATTATCCTCCAAAATCGCTTCAATTCAAGCACAACGACAAATTCTTCTCCAAGCTTCTCACCAGAGAAAGTTCTAGAGCCAATCACTCTTCTAGAATCTACTATGGCGGATTGGCCGGTGCTGTTCCTTTCGTTTGGGAGTCTCAGCCAGGTACGCCTCTTCACCGATTTTCCGATGATCTAACTCCTCCTCTCACTCCTCCTCCTTCTTACTTTTCTCATTCTCTTCAAAAACCGCCAAAAAACCGCTCCAAATCGCTCTCTCTTTTCCATATCTTCTTCAATCATAAGAGGAAACTCGATCTGTTGACGCCGCCGGTTTCCAAATCGGCGTCATTGCCGTCTTCCGGATCGATGTTCGATTCGGCCGTCGGTGCGAAGTTCGCCGGACGCCGTTCGGCGCGGCGGTTTGTGCCTGGAGTCTCGCGTTCGAAGGAGGGAGAGGATGCGGCGGCCTCCGGCTCAGTGCTTTGTTTCGGAATCGGTAGGTGA

Coding sequence (CDS)

ATGCTCTGTGAAACCTCCGATTATCCTCCAAAATCGCTTCAATTCAAGCACAACGACAAATTCTTCTCCAAGCTTCTCACCAGAGAAAGTTCTAGAGCCAATCACTCTTCTAGAATCTACTATGGCGGATTGGCCGGTGCTGTTCCTTTCGTTTGGGAGTCTCAGCCAGGTACGCCTCTTCACCGATTTTCCGATGATCTAACTCCTCCTCTCACTCCTCCTCCTTCTTACTTTTCTCATTCTCTTCAAAAACCGCCAAAAAACCGCTCCAAATCGCTCTCTCTTTTCCATATCTTCTTCAATCATAAGAGGAAACTCGATCTGTTGACGCCGCCGGTTTCCAAATCGGCGTCATTGCCGTCTTCCGGATCGATGTTCGATTCGGCCGTCGGTGCGAAGTTCGCCGGACGCCGTTCGGCGCGGCGGTTTGTGCCTGGAGTCTCGCGTTCGAAGGAGGGAGAGGATGCGGCGGCCTCCGGCTCAGTGCTTTGTTTCGGAATCGGTAGGTGA

Protein sequence

MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR

Homology

[Close]

BLAST of Csor.00g199190 vs. NCBI nr
Match: KAG6603545.1 (hypothetical protein SDJN03_04154, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033731.1 hypothetical protein SDJN02_03456, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342 bits (877), Expect = 1.29e-118
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60
           MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL
Sbjct: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60

Query: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP 120
           HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP
Sbjct: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP 120

Query: 121 SSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR 169
           SSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR
Sbjct: 121 SSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR 169

[Close]

BLAST of Csor.00g199190 vs. NCBI nr
Match: XP_038882810.1 (uncharacterized protein LOC120073955 [Benincasa hispida])

HSP 1 Score: 282 bits (721), Expect = 7.87e-95
Identity = 140/169 (82.84%), Postives = 151/169 (89.35%), Query Frame = 0


Query: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60
           MLCETSDYP KSLQFK NDKFFSK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+
Sbjct: 1   MLCETSDYPQKSLQFKQNDKFFSKILSRESSRANYSSRIYYGGLAGAVPFVWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP 120
           HRFSDDLTP LTPPPSYFS S++KP K RSKSLSL HI FN KRK+DLL+PP SKSASLP
Sbjct: 61  HRFSDDLTPTLTPPPSYFSDSVKKPLKKRSKSLSLLHILFNSKRKIDLLSPPFSKSASLP 120

Query: 121 SSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR 169
           SSGS FDSA GAKF GRRS RRF  G+SRSKE EDAAA+GS+LCFGI R
Sbjct: 121 SSGSEFDSAPGAKFTGRRSGRRFPTGISRSKEEEDAAATGSILCFGISR 169

[Close]

BLAST of Csor.00g199190 vs. NCBI nr
Match: XP_008464261.1 (PREDICTED: uncharacterized protein LOC103502186 [Cucumis melo])

HSP 1 Score: 273 bits (698), Expect = 2.27e-91
Identity = 140/170 (82.35%), Postives = 150/170 (88.24%), Query Frame = 0


Query: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60
           M+CETSDYP KSLQFK NDKFFSK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+
Sbjct: 1   MVCETSDYPQKSLQFKQNDKFFSKILSRESSRANYSSRIYYGGLAGAVPFVWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPP-VSKSASL 120
           HRFSDDLTPPLTPPPSYFS SL+KP K RSKSLSL HIFFN KRK DLL+PP VSKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPLKKRSKSLSLLHIFFNSKRKFDLLSPPPVSKSASL 120

Query: 121 PSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR 169
           PS GS+FDSA GAKF GRRSARRF       KE E+AAASGSVLCFG+GR
Sbjct: 121 PSPGSVFDSAAGAKFTGRRSARRF----PTEKEEENAAASGSVLCFGLGR 166

[Close]

BLAST of Csor.00g199190 vs. NCBI nr
Match: XP_022978307.1 (uncharacterized protein LOC111478334 [Cucurbita maxima])

HSP 1 Score: 271 bits (692), Expect = 1.47e-90
Identity = 132/137 (96.35%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60
           MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL
Sbjct: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60

Query: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP 120
           HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP
Sbjct: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP 120

Query: 121 SSGSMFDSAVGAKFAGR 137
           SSGS FDSAVGA    R
Sbjct: 121 SSGSTFDSAVGAAVCAR 137

[Close]

BLAST of Csor.00g199190 vs. NCBI nr
Match: XP_011653717.1 (uncharacterized protein LOC105435254 [Cucumis sativus])

HSP 1 Score: 261 bits (668), Expect = 8.46e-87
Identity = 135/170 (79.41%), Postives = 147/170 (86.47%), Query Frame = 0


Query: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60
           M+CETS+YP KSLQFK NDKF SK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+
Sbjct: 1   MVCETSEYPQKSLQFKQNDKFISKILSRESSRANYSSRIYYGGLAGAVPFVWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPP-VSKSASL 120
           HRFSDDLTPPLTPPPSYFS SL+KP K RSKSLSL HIFF+ KRK DLL+PP VSKS SL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPLKKRSKSLSLLHIFFSSKRKFDLLSPPPVSKSPSL 120

Query: 121 PSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR 169
            SSGS+FDSA GAKF GRRSARRF       KE E+AAA+ SVLCFGIGR
Sbjct: 121 SSSGSVFDSAAGAKFTGRRSARRF----PTEKEEENAAATSSVLCFGIGR 166

[Close]

BLAST of Csor.00g199190 vs. ExPASy TrEMBL
Match: A0A1S3CL26 (uncharacterized protein LOC103502186 OS=Cucumis melo OX=3656 GN=LOC103502186 PE=4 SV=1)

HSP 1 Score: 273 bits (698), Expect = 1.10e-91
Identity = 140/170 (82.35%), Postives = 150/170 (88.24%), Query Frame = 0


Query: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60
           M+CETSDYP KSLQFK NDKFFSK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+
Sbjct: 1   MVCETSDYPQKSLQFKQNDKFFSKILSRESSRANYSSRIYYGGLAGAVPFVWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPP-VSKSASL 120
           HRFSDDLTPPLTPPPSYFS SL+KP K RSKSLSL HIFFN KRK DLL+PP VSKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPLKKRSKSLSLLHIFFNSKRKFDLLSPPPVSKSASL 120

Query: 121 PSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR 169
           PS GS+FDSA GAKF GRRSARRF       KE E+AAASGSVLCFG+GR
Sbjct: 121 PSPGSVFDSAAGAKFTGRRSARRF----PTEKEEENAAASGSVLCFGLGR 166

[Close]

BLAST of Csor.00g199190 vs. ExPASy TrEMBL
Match: A0A6J1IKR7 (uncharacterized protein LOC111478334 OS=Cucurbita maxima OX=3661 GN=LOC111478334 PE=4 SV=1)

HSP 1 Score: 271 bits (692), Expect = 7.11e-91
Identity = 132/137 (96.35%), Postives = 132/137 (96.35%), Query Frame = 0


Query: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60
           MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL
Sbjct: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60

Query: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP 120
           HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP
Sbjct: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLP 120

Query: 121 SSGSMFDSAVGAKFAGR 137
           SSGS FDSAVGA    R
Sbjct: 121 SSGSTFDSAVGAAVCAR 137

[Close]

BLAST of Csor.00g199190 vs. ExPASy TrEMBL
Match: A0A0A0L1H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329820 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 4.10e-87
Identity = 135/170 (79.41%), Postives = 147/170 (86.47%), Query Frame = 0


Query: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60
           M+CETS+YP KSLQFK NDKF SK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+
Sbjct: 1   MVCETSEYPQKSLQFKQNDKFISKILSRESSRANYSSRIYYGGLAGAVPFVWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPP-VSKSASL 120
           HRFSDDLTPPLTPPPSYFS SL+KP K RSKSLSL HIFF+ KRK DLL+PP VSKS SL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPLKKRSKSLSLLHIFFSSKRKFDLLSPPPVSKSPSL 120

Query: 121 PSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR 169
            SSGS+FDSA GAKF GRRSARRF       KE E+AAA+ SVLCFGIGR
Sbjct: 121 SSSGSVFDSAAGAKFTGRRSARRF----PTEKEEENAAATSSVLCFGIGR 166

[Close]

BLAST of Csor.00g199190 vs. ExPASy TrEMBL
Match: A0A6J1EB06 (uncharacterized protein LOC111432413 OS=Cucurbita moschata OX=3662 GN=LOC111432413 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 6.48e-84
Identity = 135/171 (78.95%), Postives = 145/171 (84.80%), Query Frame = 0


Query: 1   MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPL 60
           MLCETSD   +SLQ KHNDKFFSKLLTRESSRA++SSR+YY GLAGAVPF WESQPGTP+
Sbjct: 1   MLCETSDNLHQSLQIKHNDKFFSKLLTRESSRADYSSRVYYAGLAGAVPFGWESQPGTPI 60

Query: 61  HRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLD-LLTPPVSKSASL 120
           HRFSDDLTPPLTPPPSYFS SL+KPPK RSKSLSLFHIFFN KRK+D LL+PP SKSASL
Sbjct: 61  HRFSDDLTPPLTPPPSYFSDSLKKPPKKRSKSLSLFHIFFNPKRKIDDLLSPPFSKSASL 120

Query: 121 PSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAA-SGSVLCFGIGR 169
           PSSGSMFDSA     AGRR  RR   G+S SKE   AAA +GSVLCFGIGR
Sbjct: 121 PSSGSMFDSA-----AGRRFPRRLPSGISHSKEKAAAAAPTGSVLCFGIGR 166

[Close]

BLAST of Csor.00g199190 vs. ExPASy TrEMBL
Match: A0A6J1CSP7 (uncharacterized protein LOC111013865 OS=Momordica charantia OX=3673 GN=LOC111013865 PE=4 SV=1)

HSP 1 Score: 208 bits (529), Expect = 2.08e-66
Identity = 104/133 (78.20%), Postives = 112/133 (84.21%), Query Frame = 0


Query: 5   TSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSR-IYYGGLAGAVPFVWESQPGTPLHRF 64
           +SDYP KSLQ K NDKFFSKLL+RESSRAN SSR +YYGG AGAVPF WESQPGTP HRF
Sbjct: 2   SSDYPQKSLQIKQNDKFFSKLLSRESSRANSSSRSVYYGGFAGAVPFDWESQPGTPKHRF 61

Query: 65  SDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLPSSG 124
           SD LTPPLTPPPS+FS S +KPPKNRSKSL+LFHIFFN KRK DLL PP S+SA+LPSSG
Sbjct: 62  SDHLTPPLTPPPSFFSDSAKKPPKNRSKSLNLFHIFFNPKRKFDLLAPPFSRSATLPSSG 121

Query: 125 SMFDSAVGAKFAG 136
           S  DS    KFAG
Sbjct: 122 SAIDSPARVKFAG 134

[Close]

BLAST of Csor.00g199190 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 8.7e-13
Identity = 55/157 (35.03%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 18  NDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHR-FSDDL-TPPLTPPP 77
           N    SK++ +ESS+ N SSRIYY G   +VPF+WE++PGTP H  FS+ L  PPLTPPP
Sbjct: 10  NGVISSKIIVKESSQVNSSSRIYYYG-GASVPFLWETRPGTPKHALFSESLRLPPLTPPP 69

Query: 78  SYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFA 137
           SY+S S     K           F        +  P  S S++  SS S + S+      
Sbjct: 70  SYYSSSSSSGNKLSKARTIKQTRFVKTLLSRHVSRPSFSWSSASSSSSSSYSSSSPPSKV 129

Query: 138 GRRSARRFVPGVSRSKEGED----AAASGSVLCFGIG 169
             R  + +    S  KE ++    +++  S LC+  G
Sbjct: 130 EHRPRKCYSCSRSYVKEDDEEEIVSSSPTSTLCYKRG 165

[Close]

BLAST of Csor.00g199190 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 6.9e-10
Identity = 59/153 (38.56%), Postives = 75/153 (49.02%), Query Frame = 0


Query: 31  SRANHSSRI-YYGGLAGAVPFVWESQPGTPLHRFSDDLT-PPLTPPPSYFSHS---LQKP 90
           S A  S RI YY G AGAVPF WES PGTP H  S+  T PPLTPPPS+FS S   +++ 
Sbjct: 57  SAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRR 116

Query: 91  PKNRSKSL------SLFHIFFNHK---RKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAG 150
            K  +K +       LF +  +H    +KL   +PP S S  +    + +D     KF  
Sbjct: 117 SKKSTKKILALIPTRLFWLSGDHNGKAKKLSASSPP-SLSERVLIDENEYDL---FKFQT 176

Query: 151 RRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR 170
            R+  R       S +      S S  CFGI R
Sbjct: 177 ERNVMRRFSSFDSSAD-YPIQRSQSTSCFGIRR 204

[Close]

BLAST of Csor.00g199190 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-09
Identity = 51/140 (36.43%), Postives = 67/140 (47.86%), Query Frame = 0


Query: 40  YYGGLAGAVPFVWESQPGTPL-HRFSDDLTP-PLTPPPSYFSHSLQKPPKNRSKSLSLFH 99
           YYGG   ++PF+WES+PGTP  H  SD   P PLTPPPSY+S  +   P+ +SK  S   
Sbjct: 18  YYGG--ASIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILSTPRTQSKVRSKLS 77

Query: 100 IFFNHKRKLDL--------LTPPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSR 159
            F +     DL         T   S S S  SS S F S+       R S  +  P +  
Sbjct: 78  KFLSFSMFSDLRRSNHGSKKTASSSFSWSSTSSSSSFSSSPPHSLKKRMSHDKKSPLLYA 137

Query: 160 SKEGEDAAAS-GSVLCFGIG 169
           + E ++  +S  S LC   G
Sbjct: 138 NYEEDELRSSPTSTLCCSNG 155

[Close]

BLAST of Csor.00g199190 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.5e-07
Identity = 45/136 (33.09%), Postives = 60/136 (44.12%), Query Frame = 0


Query: 40  YYGGLAGAVPFVWESQPGTPLH--------------RFSDDLTPPLTPPPSYFSHSLQKP 99
           YYGG + AVPF WESQPGTP                 F+  ++ PLTPPPSYF  S   P
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYAS---P 83

Query: 100 PKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLPSSGSMFDSAV-GAKFAGRRSARRFV 159
              +  S    +  F+     +   P    S+S  SS S+  S +  +  + RR +  F 
Sbjct: 84  SSTKHVSPKKTNTLFSSLLSKNRSVPSSPASSSSSSSSSVPSSPLRTSDLSNRRRSMWFE 143

Query: 160 PGVSRSKEGEDAAASG 161
            G S       A +SG
Sbjct: 144 SGSSLDYGSNSAKSSG 156

[Close]

BLAST of Csor.00g199190 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06
Identity = 29/66 (43.94%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 30 SSRANHSSRIYYG-GLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKP--- 89
          SS + +SS  YY   +   VPF WE QPGTP++    ++ PPL+PPP+  S  L KP   
Sbjct: 10 SSISRNSSVGYYDERMPEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKPSIS 69

The following BLAST results are available for this feature:

BLAST of Csor.00g199190 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g199190 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603545.1	1.29e-118	100.00	hypothetical protein SDJN03_04154, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038882810.1	7.87e-95	82.84	uncharacterized protein LOC120073955 [Benincasa hispida]	[more]
XP_008464261.1	2.27e-91	82.35	PREDICTED: uncharacterized protein LOC103502186 [Cucumis melo]	[more]
XP_022978307.1	1.47e-90	96.35	uncharacterized protein LOC111478334 [Cucurbita maxima]	[more]
XP_011653717.1	8.46e-87	79.41	uncharacterized protein LOC105435254 [Cucumis sativus]	[more]

BLAST of Csor.00g199190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CL26	1.10e-91	82.35	uncharacterized protein LOC103502186 OS=Cucumis melo OX=3656 GN=LOC103502186 PE=...	[more]
A0A6J1IKR7	7.11e-91	96.35	uncharacterized protein LOC111478334 OS=Cucurbita maxima OX=3661 GN=LOC111478334...	[more]
A0A0A0L1H9	4.10e-87	79.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G329820 PE=4 SV=1	[more]
A0A6J1EB06	6.48e-84	78.95	uncharacterized protein LOC111432413 OS=Cucurbita moschata OX=3662 GN=LOC1114324...	[more]
A0A6J1CSP7	2.08e-66	78.20	uncharacterized protein LOC111013865 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Csor.00g199190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40475.1	8.7e-13	35.03	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G01790.1	6.9e-10	38.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G56260.2	2.6e-09	36.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06930.1	2.5e-07	33.09	unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; ...	[more]
AT4G25845.1	2.7e-06	43.94	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33257:SF24	EXPRESSED PROTEIN	coord: 5..166
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 5..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g199190.m01	Csor.00g199190.m01	mRNA