Csor.00g198840 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g198840
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	LEA_2 domain-containing protein
Location	Csor_Chr03: 4076571 .. 4077227 (+)
RNA-Seq Expression	Csor.00g198840
Synteny	Csor.00g198840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTCGCCTCCTCCTCCACCTCTACCTTAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGAAACCGCACGCTCCCGGAGTCGCCGCAAGCTCTGCATCGGAGTCTCCGTCGCCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCATTCACGGTGTTCAAGCCAAAGCGACCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGCTAAGCGTATTCAGAACCTCTGTCGATTTCAACATCACTCTGGTTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGTGTTTTTCAATTACAGAGGCGAACTGGTTGCCGAGGTGCCGATTCTGGCCGCGGAAATCGATGCAGGTCAGACCACGCAGATGAACATTACGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTTTTCTACGACGTCGTAGCTGGATCGATGCCGTTGAATGCGTACGCGAGAGTTTCAGGTAAGGTGATGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACGTATCGGAGAGGAATATTAAAGATCAACGGTGTAATTACCATACTAAGATCTAA

mRNA sequence

ATGGAAGTCGCCTCCTCCTCCACCTCTACCTTAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGAAACCGCACGCTCCCGGAGTCGCCGCAAGCTCTGCATCGGAGTCTCCGTCGCCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCATTCACGGTGTTCAAGCCAAAGCGACCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGCTAAGCGTATTCAGAACCTCTGTCGATTTCAACATCACTCTGGTTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGTGTTTTTCAATTACAGAGGCGAACTGGTTGCCGAGGTGCCGATTCTGGCCGCGGAAATCGATGCAGGTCAGACCACGCAGATGAACATTACGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTTTTCTACGACGTCGTAGCTGGATCGATGCCGTTGAATGCGTACGCGAGAGTTTCAGGTAAGGTGATGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACGTATCGGAGAGGAATATTAAAGATCAACGGTGTAATTACCATACTAAGATCTAA

Coding sequence (CDS)

ATGGAAGTCGCCTCCTCCTCCACCTCTACCTTAATCAAGGATTCCAAATCCACTAAATCCGTCGTCGACGAAACCGCACGCTCCCGGAGTCGCCGCAAGCTCTGCATCGGAGTCTCCGTCGCCGTCGCCGTCGTCCTCCTCGTCGTCGTTATAATCGTCATTTTAGCATTCACGGTGTTCAAGCCAAAGCGACCTATCACCACCATCAATTCCGTCTCCATTGACGATTTCGACATGTCGCTAAGCGTATTCAGAACCTCTGTCGATTTCAACATCACTCTGGTTGCCGATGTCGCTATTACGAACCCTAACAAGGTCGGATTTAGCTACTCGAATAGCACCGTGTTTTTCAATTACAGAGGCGAACTGGTTGCCGAGGTGCCGATTCTGGCCGCGGAAATCGATGCAGGTCAGACCACGCAGATGAACATTACGTTGAGGATTTTGGCAGATCGGTTTGTGAAAACGTCGACGGTTTTCTACGACGTCGTAGCTGGATCGATGCCGTTGAATGCGTACGCGAGAGTTTCAGGTAAGGTGATGATTTTGGGGATTTTCAATATTCATATGGTTTCTACAACATCGTGTGATTTCAGTATTAACGTATCGGAGAGGAATATTAAAGATCAACGGTGTAATTACCATACTAAGATCTAA

Protein sequence

MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYRGELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKVMILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI

Homology

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BLAST of Csor.00g198840 vs. NCBI nr
Match: KAG6603510.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033691.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399 bits (1024), Expect = 2.08e-139
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120
           KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180
           GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
           MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218

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BLAST of Csor.00g198840 vs. NCBI nr
Match: XP_022950379.1 (uncharacterized protein LOC111453494 [Cucurbita moschata])

HSP 1 Score: 384 bits (987), Expect = 9.08e-134
Identity = 210/218 (96.33%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTST IKDSKSTKSVVDETARSRSRR LCIGVSVAVAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120
           KPKRPITTINSVSIDDFDMSLSV RTSVDFNITLVADVAITNPNKVGFSYSNST FFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180
           GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVF+DVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
            ILGIFNIHMVSTTSCDFSIN+SERNIKDQ+CNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

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BLAST of Csor.00g198840 vs. NCBI nr
Match: XP_022977374.1 (uncharacterized protein LOC111477726 [Cucurbita maxima])

HSP 1 Score: 376 bits (966), Expect = 1.44e-130
Identity = 204/218 (93.58%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTLIKDSKSTKSVVD TA SRSRR LCIGVSV VAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120
           KPKRPITTINSVSIDDFDMSLSV RTSVDFNITL+ADVAITNPNKVGFSYSNST FFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180
           GELV EVPILAA+IDAGQTTQMNI LRILADRFVKTSTVF+DVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
           MILGIFNIHMVSTTSCDFSIN+SERNIKDQ+CNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

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BLAST of Csor.00g198840 vs. NCBI nr
Match: XP_023544036.1 (uncharacterized protein LOC111803737 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374 bits (959), Expect = 1.68e-129
Identity = 203/218 (93.12%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTLIKD KSTKSVVDETARSRS   LCIGVSVAVAVVL +VVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDFKSTKSVVDETARSRSHSNLCIGVSVAVAVVLFLVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120
           KPKRPITTINSVSIDDFD+SLSV RTSVDFNITLVADVAITNPNKVGFSYSNST FFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDLSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180
           GELV EVPILAA+IDAGQTTQMNITLRILADRFVKTSTVF+DVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
            ILGIFNIHMVSTTSCDFSIN+SERNIKDQ+CNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

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BLAST of Csor.00g198840 vs. NCBI nr
Match: XP_004142665.1 (uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical protein Csa_012636 [Cucumis sativus])

HSP 1 Score: 281 bits (718), Expect = 7.50e-93
Identity = 146/218 (66.97%), Postives = 181/218 (83.03%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           ME+ASSS+S LIKD KST+S      RSR RR  CIG+S  +A++LL+++II+ILAFTVF
Sbjct: 1   MEIASSSSS-LIKDPKSTQSTAAAATRSRKRRNTCIGIS--IAILLLLIIIIIILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120
           K KRPITT+NSV++ D D+SL++   SVD N+TL+AD+AITNPNKVGFSY NST F NYR
Sbjct: 61  KAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180
           GELV E PI+A +IDAG+  +MNITL I+ADR +KT+TVF D VAGSMPLN Y R+SGKV
Sbjct: 121 GELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
            ILGIFNIH+VS+TSCDF++++SER I DQ+CNYHTKI
Sbjct: 181 KILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

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BLAST of Csor.00g198840 vs. ExPASy TrEMBL
Match: A0A6J1GFM4 (uncharacterized protein LOC111453494 OS=Cucurbita moschata OX=3662 GN=LOC111453494 PE=4 SV=1)

HSP 1 Score: 384 bits (987), Expect = 4.40e-134
Identity = 210/218 (96.33%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTST IKDSKSTKSVVDETARSRSRR LCIGVSVAVAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTSIKDSKSTKSVVDETARSRSRRNLCIGVSVAVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120
           KPKRPITTINSVSIDDFDMSLSV RTSVDFNITLVADVAITNPNKVGFSYSNST FFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLVADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180
           GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVF+DVVAGSMPLNAYARVSGKV
Sbjct: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFFDVVAGSMPLNAYARVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
            ILGIFNIHMVSTTSCDFSIN+SERNIKDQ+CNYHTKI
Sbjct: 181 RILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

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BLAST of Csor.00g198840 vs. ExPASy TrEMBL
Match: A0A6J1IR72 (uncharacterized protein LOC111477726 OS=Cucurbita maxima OX=3661 GN=LOC111477726 PE=4 SV=1)

HSP 1 Score: 376 bits (966), Expect = 6.98e-131
Identity = 204/218 (93.58%), Postives = 210/218 (96.33%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           MEVASSSTSTLIKDSKSTKSVVD TA SRSRR LCIGVSV VAVVLLVVVIIVILAFTVF
Sbjct: 1   MEVASSSTSTLIKDSKSTKSVVDATASSRSRRNLCIGVSVVVAVVLLVVVIIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120
           KPKRPITTINSVSIDDFDMSLSV RTSVDFNITL+ADVAITNPNKVGFSYSNST FFNYR
Sbjct: 61  KPKRPITTINSVSIDDFDMSLSVVRTSVDFNITLIADVAITNPNKVGFSYSNSTAFFNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180
           GELV EVPILAA+IDAGQTTQMNI LRILADRFVKTSTVF+DVVAGSMPLNAYA+VSGKV
Sbjct: 121 GELVGEVPILAAQIDAGQTTQMNIRLRILADRFVKTSTVFFDVVAGSMPLNAYAKVSGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
           MILGIFNIHMVSTTSCDFSIN+SERNIKDQ+CNYHTKI
Sbjct: 181 MILGIFNIHMVSTTSCDFSINISERNIKDQQCNYHTKI 218

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BLAST of Csor.00g198840 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 281 bits (718), Expect = 3.63e-93
Identity = 146/218 (66.97%), Postives = 181/218 (83.03%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           ME+ASSS+S LIKD KST+S      RSR RR  CIG+S  +A++LL+++II+ILAFTVF
Sbjct: 1   MEIASSSSS-LIKDPKSTQSTAAAATRSRKRRNTCIGIS--IAILLLLIIIIIILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120
           K KRPITT+NSV++ D D+SL++   SVD N+TL+AD+AITNPNKVGFSY NST F NYR
Sbjct: 61  KAKRPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180
           GELV E PI+A +IDAG+  +MNITL I+ADR +KT+TVF D VAGSMPLN Y R+SGKV
Sbjct: 121 GELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
            ILGIFNIH+VS+TSCDF++++SER I DQ+CNYHTKI
Sbjct: 181 KILGIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

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BLAST of Csor.00g198840 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 280 bits (715), Expect = 1.07e-92
Identity = 147/219 (67.12%), Postives = 184/219 (84.02%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETA-RSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTV 60
           ME+ASSS+S+ IKD KST+S     A RSR RR  CIG+S  +A++LL++++I+ILAFTV
Sbjct: 1   MEIASSSSSS-IKDPKSTQSAAAAAAARSRKRRNTCIGIS--IAILLLLIILIIILAFTV 60

Query: 61  FKPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNY 120
           FK KRPITT+NSV++ D D+SL++ R SVD N+TL+A +AITNPNKVGFSY NST F NY
Sbjct: 61  FKAKRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNY 120

Query: 121 RGELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGK 180
           RGELV E PI+A +IDAG+  +MNITL I+ADR +KT+TVF DVVAGSMPLN YAR+SGK
Sbjct: 121 RGELVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGK 180

Query: 181 VMILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
           V ILGIFNIH+VSTTSCDF++++SER + DQ+CNYHTKI
Sbjct: 181 VKILGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

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BLAST of Csor.00g198840 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 5.99e-80
Identity = 136/218 (62.39%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 1   MEVASSSTSTLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVF 60
           ME+ASS+T    KD KS         RSR RR  CIGVS  +A VLL++V+IVILAFTVF
Sbjct: 1   MEIASSTT----KDPKS--------IRSRRRRNTCIGVS--IATVLLLIVLIVILAFTVF 60

Query: 61  KPKRPITTINSVSIDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYR 120
           K KRPITTINSV++ D D+SL++ R++V  NITL+ DV+ITNPNKVGFSYSNST   NYR
Sbjct: 61  KAKRPITTINSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYR 120

Query: 121 GELVAEVPILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKV 180
           GEL+ E PI +  I+A Q+ +MNIT+ I+ADR +++STV  DVVAGSMPLN Y R+SGKV
Sbjct: 121 GELIGEAPIPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKV 180

Query: 181 MILGIFNIHMVSTTSCDFSINVSERNIKDQRCNYHTKI 218
            ILGIF I +VS+TSCDF+I++S+R I DQ+C+YHTKI
Sbjct: 181 RILGIFKIRVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

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BLAST of Csor.00g198840 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 172.2 bits (435), Expect = 4.7e-43
Identity = 90/205 (43.90%), Postives = 139/205 (67.80%), Query Frame = 0


Query: 15  SKSTKSVVDETARSRSRRKLC-IGVSVAVAVVLLVVVIIVILAFTVFKPKRPITTINSVS 74
           S  T+S    TA+   R++ C I +   + ++LL+ ++IVILAFT+FKPKRP TTI+SV+
Sbjct: 31  SMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVT 90

Query: 75  IDDFDMSLSVFRTSVDFNITLVADVAITNPNKVGFSYSNSTVFFNYRGELVAEVPILAAE 134
           +D    S++     V  N+TL  D+++ NPN++GFSY +S+   NYRG+++ E P+ A  
Sbjct: 91  VDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANR 150

Query: 135 IDAGQTTQMNITLRILADRFVKTSTVFYDVVAGSMPLNAYARVSGKVMILGIFNIHMVST 194
           I A +T  +NITL ++ADR +  + +  DV+AG +PLN + +V+GKV +L IF I + S+
Sbjct: 151 IAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSS 210

Query: 195 TSCDFSINVSERNIKDQRCNYHTKI 219
           +SCD SI+VS+RN+  Q C Y TK+
Sbjct: 211 SSCDLSISVSDRNVTSQHCKYSTKL 235

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BLAST of Csor.00g198840 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 98.2 bits (243), Expect = 8.6e-21
Identity = 66/206 (32.04%), Postives = 114/206 (55.34%), Query Frame = 0


Query: 9   STLIKDSKSTKSVVDETARSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVFKPKRPITT 68
           +T++  S  + S +  T RSR+R K  I V+   A  L++  I++ L FTVF+ K PI  
Sbjct: 13  ATILPVSDESASNIKNTHRSRNRIKCSICVT---ATSLILTTIVLTLVFTVFRVKDPIIK 72

Query: 69  INSVSIDDFDMSLSVFRTS-VDFNITLVADVAITNPNKVGFSYSNSTVFFNYRGELVAEV 128
           +N V ++  D      +   +  NI+++ DV++ NPN   F YSN+T    Y+G LV E 
Sbjct: 73  MNGVMVNGLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEA 132

Query: 129 PILAAEIDAGQTTQMNITLRILADRFVKTSTVFYDVV-AGSMPLNAYARVSGKVMILGIF 188
             L  +    +T++MN+T+ I+ DR +    +  ++  +G + + +Y RV GKV I+GI 
Sbjct: 133 HGLPGKARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIV 192

Query: 189 NIHMVSTTSCDFSINVSERNIKDQRC 213
             H+    +C  ++N++ + I+D  C
Sbjct: 193 KKHVTVKMNCTMAVNITGQAIQDVDC 215

[Close]

BLAST of Csor.00g198840 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 55/190 (28.95%), Postives = 97/190 (51.05%), Query Frame = 0


Query: 30  SRRKLCIGVSVAVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVFRTSVD 89
           S+R++C  VS  + V+ ++ +  +ILA  VFKPK PI    S ++D    ++S+    V 
Sbjct: 2   SKRRICCIVSGIIFVLFVIFMTALILA-QVFKPKHPILQTVSSTVDGISTNISL-PYEVQ 61

Query: 90  FNITLVADVAITNPNKVGFSYSNSTVFFNYRGELVAEVPILAAEIDAGQTTQMNITLRIL 149
            N TL  ++ + NPN   F Y        YR  LV  + + ++ + A  +  +   L + 
Sbjct: 62  LNFTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQ 121

Query: 150 ADRFV-KTSTVFYDVVAGSMPLNAYARVSGKVMILGIFNIHMVSTTSCDFSINVSERNIK 209
            D+FV     +  DV+ G + +   A++ GK+ +LGIF I + S + C+  +      ++
Sbjct: 122 LDKFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVE 181

Query: 210 DQRCNYHTKI 219
           DQ C+  TK+
Sbjct: 182 DQVCDLKTKL 189

[Close]

BLAST of Csor.00g198840 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07
Identity = 38/122 (31.15%), Postives = 66/122 (54.10%), Query Frame = 0


Query: 27  RSRSRRKLCIGVSVAVAVVLLVVVIIVILAFTVFKPKRPITTINSVSIDDFDMSLSVFRT 86
           R  S R      +VA   +L+++V+++++ FTVFKPK P  ++N+V +  F +S +    
Sbjct: 8   RRSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVSNNT--- 67

Query: 87  SVDFNITLVADVAITNPNKVGFSYSNSTVFFNYRGELVAEVPILAAEIDAGQTTQMNITL 146
               N +    VA+ NPN+  FS+ +S++   Y G  V  + I A +ID+G+   M  T 
Sbjct: 68  ---ANFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAATF 123

Query: 147 RI 149
            +
Sbjct: 128 TV 123

The following BLAST results are available for this feature:

BLAST of Csor.00g198840 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g198840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603510.1	2.08e-139	100.00	Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022950379.1	9.08e-134	96.33	uncharacterized protein LOC111453494 [Cucurbita moschata]	[more]
XP_022977374.1	1.44e-130	93.58	uncharacterized protein LOC111477726 [Cucurbita maxima]	[more]
XP_023544036.1	1.68e-129	93.12	uncharacterized protein LOC111803737 [Cucurbita pepo subsp. pepo]	[more]
XP_004142665.1	7.50e-93	66.97	uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical ...	[more]

BLAST of Csor.00g198840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFM4	4.40e-134	96.33	uncharacterized protein LOC111453494 OS=Cucurbita moschata OX=3662 GN=LOC1114534...	[more]
A0A6J1IR72	6.98e-131	93.58	uncharacterized protein LOC111477726 OS=Cucurbita maxima OX=3661 GN=LOC111477726...	[more]
A0A0A0L094	3.63e-93	66.97	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ...	[more]
A0A1S3CJB5	1.07e-92	67.12	uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=...	[more]
A0A6J1HS80	5.99e-80	62.39	uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106...	[more]

BLAST of Csor.00g198840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54200.1	4.7e-43	43.90	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G46150.1	8.6e-21	32.04	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G05975.1	1.2e-14	28.95	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G64450.1	2.4e-07	31.15	Glycine-rich protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.40.1820		coord: 51..200 e-value: 1.9E-9 score: 39.4
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 26..217
None	No IPR available	PANTHER	PTHR31852:SF122	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 26..217
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 46..162
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 98..185 e-value: 4.0E-9 score: 36.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g198840.m01	Csor.00g198840.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane