Csor.00g196150 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCGAGGGAAGATTGAGATCAAACGGATTGAGAATGCTAATAGCAGGCAAGTTACATTCTCAAAGCGACGAGCTGGGTTGCTTAAGAAGGCTCAGGAGCTTGCTATTCTTTGTGATGCTGAAGTTGCTGTTATTATCTTCTCTAATACTGGCAAGCTTTTTGAGTTTTCCAGCTCTGGGTTTGTGTTCTTCTTCACTCTCTAATACTTCTTCTTCTTGTTTTGCATATTGCTTTGCTTTGCATGTTGAATGGTTGTCTATGTTCTTGAGATTATTGGAGAACTTGAGCTGAATCTTGTGGGATTTTGGTGTTTTTGTTTGTGCATTGCATGTTCTTTTAGAAGCCTTGTTTATACTCTTCTTCATTGCTTAGTTTTTTGTTCATGTTTTGGATAGTTATGATCTTGAGGGCGCCTTTTTTTGGGTGTTTGTACTGTTCTTGACTCGTTTACAATCTTCATTTTAATGTTCTTTCTTCACCTTGTCGGACATGTCTGTCTCTTATGCTTGTCTGATACTGTTTTGAATCATAATTCCAGCTTCTAAATGCTTCGAGTTTTTCGTTGAATCATAGTTTTTGAAGATTCTATAGGCTTATGTCTTAAAATATTTGATCATGCATACACTTGGAAGGCTTGTTTGAAGGATGTTTTGATTGTAAGACATGTCTTTTGGGGCAAGGACTAGATGTGGTCTTCATGGTCTGGTTTGAATGAACTTGGTCTGAATCTGGTGTCTTGTTGTAAATTTTTTGAATTGACTTGGCTTCTTGATCTTCCTCTTGTCCTCTGTTCTTTTTTGTTCTTTTTTGGTGCTCAACTCTGTTTTGTTCATGTTCTTTTTTGGTGTTTATGAGTCAACAAACAATACTACTCGATATATTTATCGGCCGGTGAAGTTTATCAACATGTATGTCTTCAAAATCATCATGTCGCTGATGTATGTTCACTGTTAGTTGATATTGTCCTCTTTAGGCTTTCCTTCCGGGCTTTCCCTTAAGGTTTTAAAATGCGTCTACTAGGGAGAGGTTTCCACGCCCTTACAAGGAATACTTCCTTCCCCTCCACAACTGAGGTGGGATCTCACAATCTACCTGCATGGGGGCCTAGCGCCCCCGCTGGCACACCATCCGGTGTCTGGCTCTAATACCATTTGTTAGAGCTCAAACTCACCGCTAACAGATATTGCTCTCTTTGTGCTTTCCCTTCTGGGTTTCCCCTCAAGGTTTTTAAAACATGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATATTTCGTTTTCCTACCCAACCTACGTGGGATCTCACAATCCACCCCCTTTAGAGCCCAGCGTCCTCGCCCTTATGTTTCTTTTCGAAGTAACTAAACCTAATTGAGGTGTTTTTTTGGAGATAAACTAAGACGTGAAATGACAAGTTCTGTCTGTAAATCGTCGTTTTCGCTCTCATTATTATAAGTTTGAACAGGGAGAAGTAAGATAAAGAACCTCCAATATGATGAAGCCTAATCCAATCTATTTTATCATTCTTTGGGCAGCATGAAACATACTCTTTCAAGATACAACAGATGTATAGAATCTTCAGAGACTCCGATAGACGGACACAAGGCTGAGGTACGGAGTGACGATTTTGGGTTCAAACTGCCTGGTTGTTCATTTTTTTCGAACATTCTCGGGCAATACATTGCATGTTTCTCCTAACAGTATCTTCATCTCCAGAAGCAAGAGCATGAGGAGGTAGACAATCTACGAGATGAAATAACGACTCTGCAAATGAAACAATTGTATACCATCTATCTTCTCTCGACCCGTGATTTCTAAAGCTAAGATACATATTTTTATACGTAGATTTTGTCGTTTGGCTTCGTAGGCAGCTACTGGGAAAGGATCTAACTGGCTTGGGCTTCAAGGAATTGCAAAACCTAGAGCAACAACTAAATGAAGGGCTCTTACTGGTGAAAGAGAAGAAGGTTTGGGATTAGTGATAGTTTTTAAACATAATTCAGCTTTCAAGCTCTGATAATCCTTATATTTCTTTAGGAACAGTTACTGATGGAACAACTAGAGCAATCAAGGGTACAGGTGACTTAATATACTTCGTGCCTTTATTATACAAGGGATGGCCTTAAATTCTTCATGTTTAAGCGAGTTCGGGATAGGTTCGTCCTTGAAAATAGAACCTCAGAGAGAGAACTTCGATCTTTGATCGATAACATATTAAGCCATAGAGATGACAAATGTTTTTGAACGTAGTTTGTCGTTTTGATTCGTGATAACACCTTAAAACATGATAATTCAAGTTCATATTTTTGTTTCAGGAACAACGAGCAATGCTAGAAAACGAAACTCTGCGGAGACAGGCGAGTTATCATTGATACGAACTTAAAAGTATTCAAGATATGAGTTCTTATGATTTTGAACTTACAATTCATTGTAGGTCAGCGAGCTTCGATGTCTGTTTCCTCCAGTTGACTGTCCGCTTCCTGCTTATCTTGAATACTGCACCCTAGAGAAGAAGAAGGTAGGCATTAGAATCCCCGATGTCGCCTGCAACTCCGAAATAGAAAGAGGAGATTCCGACACCACCTTGCACTTGGGGTAATAATGGCTTCCTTTTTAACTGAGATATGAAATTCTTATAAACATCGTAAGCATACGAACATCAGTCGAAATTCTCTGTTCTTAGCAGGAAACGACACGAACTCTGCGTTCGTGATCTTCCATTGTTCTATATATTACCGCTTATGTTTCTAACCTTACCCTCCCTGTTGGCCAGGCTACCATCACATGTCTATTGCAAGAGAAAGGAGGCTGAAAGAGATACTCATTCAAATGATTCAGGGAGTCAAATGGGCCTACTCTGA ATGGGTCGAGGGAAGATTGAGATCAAACGGATTGAGAATGCTAATAGCAGGCAAGTTACATTCTCAAAGCGACGAGCTGGGTTGCTTAAGAAGGCTCAGGAGCTTGCTATTCTTTGTGATGCTGAAGTTGCTGTTATTATCTTCTCTAATACTGGCAAGCTTTTTGAGTTTTCCAGCTCTGGCATGAAACATACTCTTTCAAGATACAACAGATGTATAGAATCTTCAGAGACTCCGATAGACGGACACAAGGCTGAGAAGCAAGAGCATGAGGAGGTAGACAATCTACGAGATGAAATAACGACTCTGCAAATGAAACAATTGCAGCTACTGGGAAAGGATCTAACTGGCTTGGGCTTCAAGGAATTGCAAAACCTAGAGCAACAACTAAATGAAGGGCTCTTACTGGTGAAAGAGAAGAAGGAACAGTTACTGATGGAACAACTAGAGCAATCAAGGGTACAGGTCAGCGAGCTTCGATGTCTGTTTCCTCCAGTTGACTGTCCGCTTCCTGCTTATCTTGAATACTGCACCCTAGAGAAGAAGAAGGTAGGCATTAGAATCCCCGATGTCGCCTGCAACTCCGAAATAGAAAGAGGAGATTCCGACACCACCTTGCACTTGGGGAAACGACACGAACTCTGCGTTCGTGATCTTCCATTGTTCTATATATTACCGCTTATGTTTCTAACCTTACCCTCCCTGTTGGCCAGGCTACCATCACATGTCTATTGCAAGAGAAAGGAGGCTGAAAGAGATACTCATTCAAATGATTCAGGGAGTCAAATGGGCCTACTCTGA ATGGGTCGAGGGAAGATTGAGATCAAACGGATTGAGAATGCTAATAGCAGGCAAGTTACATTCTCAAAGCGACGAGCTGGGTTGCTTAAGAAGGCTCAGGAGCTTGCTATTCTTTGTGATGCTGAAGTTGCTGTTATTATCTTCTCTAATACTGGCAAGCTTTTTGAGTTTTCCAGCTCTGGCATGAAACATACTCTTTCAAGATACAACAGATGTATAGAATCTTCAGAGACTCCGATAGACGGACACAAGGCTGAGAAGCAAGAGCATGAGGAGGTAGACAATCTACGAGATGAAATAACGACTCTGCAAATGAAACAATTGCAGCTACTGGGAAAGGATCTAACTGGCTTGGGCTTCAAGGAATTGCAAAACCTAGAGCAACAACTAAATGAAGGGCTCTTACTGGTGAAAGAGAAGAAGGAACAGTTACTGATGGAACAACTAGAGCAATCAAGGGTACAGGTCAGCGAGCTTCGATGTCTGTTTCCTCCAGTTGACTGTCCGCTTCCTGCTTATCTTGAATACTGCACCCTAGAGAAGAAGAAGGTAGGCATTAGAATCCCCGATGTCGCCTGCAACTCCGAAATAGAAAGAGGAGATTCCGACACCACCTTGCACTTGGGGAAACGACACGAACTCTGCGTTCGTGATCTTCCATTGTTCTATATATTACCGCTTATGTTTCTAACCTTACCCTCCCTGTTGGCCAGGCTACCATCACATGTCTATTGCAAGAGAAAGGAGGCTGAAAGAGATACTCATTCAAATGATTCAGGGAGTCAAATGGGCCTACTCTGA MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSSSGMKHTLSRYNRCIESSETPIDGHKAEKQEHEEVDNLRDEITTLQMKQLQLLGKDLTGLGFKELQNLEQQLNEGLLLVKEKKEQLLMEQLEQSRVQVSELRCLFPPVDCPLPAYLEYCTLEKKKVGIRIPDVACNSEIERGDSDTTLHLGKRHELCVRDLPLFYILPLMFLTLPSLLARLPSHVYCKRKEAERDTHSNDSGSQMGLL Homology
BLAST of Csor.00g196150 vs. ExPASy Swiss-Prot
Match: Q38847 (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana OX=3702 GN=AGL15 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.5e-48 Identity = 121/223 (54.26%), Postives = 152/223 (68.16%), Query Frame = 0
BLAST of Csor.00g196150 vs. ExPASy Swiss-Prot
Match: Q39295 (Agamous-like MADS-box protein AGL15 OS=Brassica napus OX=3708 GN=AGL15 PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 4.1e-46 Identity = 120/228 (52.63%), Postives = 150/228 (65.79%), Query Frame = 0
BLAST of Csor.00g196150 vs. ExPASy Swiss-Prot
Match: Q9M2K8 (Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana OX=3702 GN=AGL18 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 6.8e-33 Identity = 86/169 (50.89%), Postives = 120/169 (71.01%), Query Frame = 0
BLAST of Csor.00g196150 vs. ExPASy Swiss-Prot
Match: Q6EU39 (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 4.4e-32 Identity = 79/159 (49.69%), Postives = 109/159 (68.55%), Query Frame = 0
BLAST of Csor.00g196150 vs. ExPASy Swiss-Prot
Match: P29386 (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 SV=2) HSP 1 Score: 138.7 bits (348), Expect = 9.9e-32 Identity = 78/159 (49.06%), Postives = 109/159 (68.55%), Query Frame = 0
BLAST of Csor.00g196150 vs. NCBI nr
Match: KAG6606892.1 (Agamous-like MADS-box protein AGL15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 515 bits (1326), Expect = 7.63e-184 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
BLAST of Csor.00g196150 vs. NCBI nr
Match: KAG7036597.1 (Agamous-like MADS-box protein AGL15, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 438 bits (1127), Expect = 6.80e-154 Identity = 237/271 (87.45%), Postives = 237/271 (87.45%), Query Frame = 0
BLAST of Csor.00g196150 vs. NCBI nr
Match: XP_023523559.1 (agamous-like MADS-box protein AGL15 isoform X5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 433 bits (1114), Expect = 8.99e-152 Identity = 236/280 (84.29%), Postives = 237/280 (84.64%), Query Frame = 0
BLAST of Csor.00g196150 vs. NCBI nr
Match: XP_022948666.1 (agamous-like MADS-box protein AGL15 isoform X5 [Cucurbita moschata]) HSP 1 Score: 431 bits (1109), Expect = 5.20e-151 Identity = 234/280 (83.57%), Postives = 236/280 (84.29%), Query Frame = 0
BLAST of Csor.00g196150 vs. NCBI nr
Match: XP_022998484.1 (agamous-like MADS-box protein AGL15 isoform X5 [Cucurbita maxima]) HSP 1 Score: 428 bits (1101), Expect = 8.60e-150 Identity = 234/280 (83.57%), Postives = 235/280 (83.93%), Query Frame = 0
BLAST of Csor.00g196150 vs. ExPASy TrEMBL
Match: A0A6J1G9U7 (agamous-like MADS-box protein AGL15 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111452271 PE=4 SV=1) HSP 1 Score: 431 bits (1109), Expect = 2.52e-151 Identity = 234/280 (83.57%), Postives = 236/280 (84.29%), Query Frame = 0
BLAST of Csor.00g196150 vs. ExPASy TrEMBL
Match: A0A6J1KEG0 (agamous-like MADS-box protein AGL15 isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111493101 PE=4 SV=1) HSP 1 Score: 428 bits (1101), Expect = 4.16e-150 Identity = 234/280 (83.57%), Postives = 235/280 (83.93%), Query Frame = 0
BLAST of Csor.00g196150 vs. ExPASy TrEMBL
Match: A0A6J1G9V4 (agamous-like MADS-box protein AGL15 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452271 PE=4 SV=1) HSP 1 Score: 425 bits (1093), Expect = 8.24e-149 Identity = 234/285 (82.11%), Postives = 236/285 (82.81%), Query Frame = 0
BLAST of Csor.00g196150 vs. ExPASy TrEMBL
Match: A0A6J1GAK4 (agamous-like MADS-box protein AGL15 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452271 PE=4 SV=1) HSP 1 Score: 424 bits (1089), Expect = 3.12e-148 Identity = 233/283 (82.33%), Postives = 235/283 (83.04%), Query Frame = 0
BLAST of Csor.00g196150 vs. ExPASy TrEMBL
Match: A0A6J1G9V9 (agamous-like MADS-box protein AGL15 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111452271 PE=4 SV=1) HSP 1 Score: 423 bits (1088), Expect = 3.70e-148 Identity = 232/280 (82.86%), Postives = 234/280 (83.57%), Query Frame = 0
BLAST of Csor.00g196150 vs. TAIR 10
Match: AT5G13790.1 (AGAMOUS-like 15 ) HSP 1 Score: 192.2 bits (487), Expect = 5.3e-49 Identity = 121/223 (54.26%), Postives = 152/223 (68.16%), Query Frame = 0
BLAST of Csor.00g196150 vs. TAIR 10
Match: AT3G57390.1 (AGAMOUS-like 18 ) HSP 1 Score: 142.5 bits (358), Expect = 4.9e-34 Identity = 86/169 (50.89%), Postives = 120/169 (71.01%), Query Frame = 0
BLAST of Csor.00g196150 vs. TAIR 10
Match: AT2G45650.1 (AGAMOUS-like 6 ) HSP 1 Score: 138.7 bits (348), Expect = 7.0e-33 Identity = 78/159 (49.06%), Postives = 109/159 (68.55%), Query Frame = 0
BLAST of Csor.00g196150 vs. TAIR 10
Match: AT3G61120.1 (AGAMOUS-like 13 ) HSP 1 Score: 135.2 bits (339), Expect = 7.7e-32 Identity = 80/166 (48.19%), Postives = 110/166 (66.27%), Query Frame = 0
BLAST of Csor.00g196150 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 ) HSP 1 Score: 132.9 bits (333), Expect = 3.8e-31 Identity = 77/150 (51.33%), Postives = 105/150 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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