Csor.00g195890 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g195890
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 1279678 .. 1280079 (+)
RNA-Seq ExpressionCsor.00g195890
SyntenyCsor.00g195890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGATTCCGGCAAGAGGAAGCGGAAGGAGAATGACGGCAATCGCAATGAGAGCGACGAGGCGGATGTCGAGAAATTCATGGAGATCGTCGAGAAATTCCGCGCTCCGTACGACTGGTTTAGGGCTAAAATGTCCGGTTCCGTAGCGAATGGCGAGGATCAGAGAATGAAGAAGAAGAAGAAGAAGAAGATTGTTGAAGACGATTCGAAGCGAGGCGACGTTTGGATGCCGTTTTTTCTTCTGGAAGATTTCGAGGAAGAGGAGGTTATCAAATTCTGGAAATCCACGGCGCTAAGGAAATCGGAGACGACGGCGACGGCGACGGCGGCGACAACGATGGACGGAGGGAGCGAGGAGAAGGAGAATAACGAAGGGTTAGACCTTCGCCTCTGTCTTTGA

mRNA sequence

ATGGAGGATTCCGGCAAGAGGAAGCGGAAGGAGAATGACGGCAATCGCAATGAGAGCGACGAGGCGGATGTCGAGAAATTCATGGAGATCGTCGAGAAATTCCGCGCTCCGTACGACTGGTTTAGGGCTAAAATGTCCGGTTCCGTAGCGAATGGCGAGGATCAGAGAATGAAGAAGAAGAAGAAGAAGAAGATTGTTGAAGACGATTCGAAGCGAGGCGACGTTTGGATGCCGTTTTTTCTTCTGGAAGATTTCGAGGAAGAGGAGGTTATCAAATTCTGGAAATCCACGGCGCTAAGGAAATCGGAGACGACGGCGACGGCGACGGCGGCGACAACGATGGACGGAGGGAGCGAGGAGAAGGAGAATAACGAAGGGTTAGACCTTCGCCTCTGTCTTTGA

Coding sequence (CDS)

ATGGAGGATTCCGGCAAGAGGAAGCGGAAGGAGAATGACGGCAATCGCAATGAGAGCGACGAGGCGGATGTCGAGAAATTCATGGAGATCGTCGAGAAATTCCGCGCTCCGTACGACTGGTTTAGGGCTAAAATGTCCGGTTCCGTAGCGAATGGCGAGGATCAGAGAATGAAGAAGAAGAAGAAGAAGAAGATTGTTGAAGACGATTCGAAGCGAGGCGACGTTTGGATGCCGTTTTTTCTTCTGGAAGATTTCGAGGAAGAGGAGGTTATCAAATTCTGGAAATCCACGGCGCTAAGGAAATCGGAGACGACGGCGACGGCGACGGCGGCGACAACGATGGACGGAGGGAGCGAGGAGAAGGAGAATAACGAAGGGTTAGACCTTCGCCTCTGTCTTTGA

Protein sequence

MEDSGKRKRKENDGNRNESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVANGEDQRMKKKKKKKIVEDDSKRGDVWMPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMDGGSEEKENNEGLDLRLCL
Homology
BLAST of Csor.00g195890 vs. NCBI nr
Match: KAG6606917.1 (hypothetical protein SDJN03_00259, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258 bits (660), Expect = 1.07e-86
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 1   MEDSGKRKRKENDGNRNESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVANGEDQRMKKK 60
           MEDSGKRKRKENDGNRNESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVANGEDQRMKKK
Sbjct: 1   MEDSGKRKRKENDGNRNESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVANGEDQRMKKK 60

Query: 61  KKKKIVEDDSKRGDVWMPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMDGGSEE 120
           KKKKIVEDDSKRGDVWMPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMDGGSEE
Sbjct: 61  KKKKIVEDDSKRGDVWMPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMDGGSEE 120

Query: 121 KENNEGLDLRLCL 133
           KENNEGLDLRLCL
Sbjct: 121 KENNEGLDLRLCL 133

BLAST of Csor.00g195890 vs. NCBI nr
Match: KAG6581317.1 (hypothetical protein SDJN03_21319, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123 bits (308), Expect = 4.91e-33
Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 0

Query: 1   MEDSGKRKRKENDGNRNESDEADVEKFMEIVEKFRAPYDWFRAKM--SGSVANGEDQRMK 60
           ME SGKRKRKE+D  R +SD+ ++EKF EIV+ FRAPY+WFRAK+  SGS+ NG D    
Sbjct: 1   MEISGKRKRKESD--RIDSDDTEIEKFSEIVDNFRAPYNWFRAKITGSGSLTNGHDLN-- 60

Query: 61  KKKKKKIVEDDSKRG--DVWMPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATT--- 120
             K  KIV  DS RG   VWMP FL+EDFEE+EVIK WK+ AL KS+T   A AA     
Sbjct: 61  --KNHKIVHRDSNRGVDGVWMPCFLVEDFEEQEVIKSWKARALPKSQTADPAAAAAAAAF 120

Query: 121 --MDGGSE--EKENNEGLDLRLCL 133
             +DGG E  +K++++ LDLRL L
Sbjct: 121 EAIDGGEEAKKKDDHKELDLRLSL 138

BLAST of Csor.00g195890 vs. NCBI nr
Match: KGN58537.1 (hypothetical protein Csa_002705 [Cucumis sativus])

HSP 1 Score: 117 bits (292), Expect = 1.27e-30
Identity = 77/141 (54.61%), Postives = 92/141 (65.25%), Query Frame = 0

Query: 1   MEDSGKRKRKENDGNRNESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVA----NGEDQR 60
           M+ SGKRKR  ND N+NE DE  ++KF EIVEKFRAPY+WFRA+MS   A    NG D++
Sbjct: 1   MDISGKRKR--NDNNQNEEDE--IQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRK 60

Query: 61  MKKKKKKKIVED-DSKRGDVWMPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMD 120
            KKKK     ED D    DVWMP FLL+DFEEEEVIK WK+ A+ + ET   A    ++D
Sbjct: 61  KKKKKPSGSGEDEDDDDDDVWMPCFLLQDFEEEEVIKSWKARAVPRPETAGPAAEFESVD 120

Query: 121 GGSEEKENN---EGLDLRLCL 133
           GG  E E     E L+LRL L
Sbjct: 121 GGRVEGEKGKKEEKLNLRLSL 137

BLAST of Csor.00g195890 vs. NCBI nr
Match: KAE8008346.1 (hypothetical protein FH972_004867 [Carpinus fangiana])

HSP 1 Score: 49.3 bits (116), Expect = 2.62e-04
Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 0

Query: 18  ESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVA-NGEDQRMKKKKKKKIVEDDSKRGDVW 77
           E D+  ++KF  +++  R   D     MSGS A NG D    K+ K+K  E+  K   VW
Sbjct: 25  EDDDQKIDKFFALIKNLREARDRL---MSGSNAFNGTDHDQNKRVKRKFGEE--KPAAVW 84

Query: 78  MPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMDGGSEEKENNEGLDLRLCL 133
            P F  EDF   E      +   +    TA    +++  GG  ++ + EGLDLRL L
Sbjct: 85  KPSFQREDFMPPEEAA--AAAPFKTPPVTALLVGSSSQRGGGNKENDTEGLDLRLSL 134

BLAST of Csor.00g195890 vs. NCBI nr
Match: KAF3959565.1 (hypothetical protein CMV_015637 [Castanea mollissima])

HSP 1 Score: 48.9 bits (115), Expect = 2.79e-04
Identity = 39/118 (33.05%), Postives = 59/118 (50.00%), Query Frame = 0

Query: 18  ESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVANGED--QRMKKKKKKKIVEDDSKRGDV 77
           E DE  +EKF  +++  R     FR      + NG D  + ++ KKKKK VE ++K+ +V
Sbjct: 22  EDDEQKIEKFFALIKNIREAR--FR------LMNGSDVMEAVENKKKKKKVEGENKQVEV 81

Query: 78  WMPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMDGGSEEKENNEGLDLRLCL 133
           W P F  EDF E+E  +              T   ++    GS+++E+ E LDL L L
Sbjct: 82  WKPSFEREDFMEDEAHQL------------KTVVGSSPRQEGSKKEEDEEELDLGLSL 119

BLAST of Csor.00g195890 vs. ExPASy TrEMBL
Match: A0A0A0LCY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G665100 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 6.15e-31
Identity = 77/141 (54.61%), Postives = 92/141 (65.25%), Query Frame = 0

Query: 1   MEDSGKRKRKENDGNRNESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVA----NGEDQR 60
           M+ SGKRKR  ND N+NE DE  ++KF EIVEKFRAPY+WFRA+MS   A    NG D++
Sbjct: 1   MDISGKRKR--NDNNQNEEDE--IQKFSEIVEKFRAPYNWFRARMSTHSAAATHNGGDRK 60

Query: 61  MKKKKKKKIVED-DSKRGDVWMPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMD 120
            KKKK     ED D    DVWMP FLL+DFEEEEVIK WK+ A+ + ET   A    ++D
Sbjct: 61  KKKKKPSGSGEDEDDDDDDVWMPCFLLQDFEEEEVIKSWKARAVPRPETAGPAAEFESVD 120

Query: 121 GGSEEKENN---EGLDLRLCL 133
           GG  E E     E L+LRL L
Sbjct: 121 GGRVEGEKGKKEEKLNLRLSL 137

BLAST of Csor.00g195890 vs. ExPASy TrEMBL
Match: A0A5N6QN79 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004867 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.27e-04
Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 0

Query: 18  ESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVA-NGEDQRMKKKKKKKIVEDDSKRGDVW 77
           E D+  ++KF  +++  R   D     MSGS A NG D    K+ K+K  E+  K   VW
Sbjct: 25  EDDDQKIDKFFALIKNLREARDRL---MSGSNAFNGTDHDQNKRVKRKFGEE--KPAAVW 84

Query: 78  MPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMDGGSEEKENNEGLDLRLCL 133
            P F  EDF   E      +   +    TA    +++  GG  ++ + EGLDLRL L
Sbjct: 85  KPSFQREDFMPPEEAA--AAAPFKTPPVTALLVGSSSQRGGGNKENDTEGLDLRLSL 134

BLAST of Csor.00g195890 vs. ExPASy TrEMBL
Match: A0A7N2REW6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.82e-04
Identity = 37/116 (31.90%), Postives = 55/116 (47.41%), Query Frame = 0

Query: 18  ESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVANGEDQRMKKKKKKKIVEDDSKRGDVWM 77
           E DE  +EKF  +++  R     FR      V  G + + KKKK    VE+++K+ +VW 
Sbjct: 21  EDDEQKIEKFFALIKNIREAR--FRLMNGSDVMEGVESKRKKKK----VEEENKQVEVWK 80

Query: 78  PFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMDGGSEEKENNEGLDLRLCL 133
           P F  EDF E+E                 T   ++    GS+++E+ E LDL L L
Sbjct: 81  PSFEREDFMEDEA-------------KLKTVVGSSPRQEGSKKEEDEEELDLGLSL 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6606917.11.07e-86100.00hypothetical protein SDJN03_00259, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6581317.14.91e-3355.56hypothetical protein SDJN03_21319, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN58537.11.27e-3054.61hypothetical protein Csa_002705 [Cucumis sativus][more]
KAE8008346.12.62e-0433.33hypothetical protein FH972_004867 [Carpinus fangiana][more]
KAF3959565.12.79e-0433.05hypothetical protein CMV_015637 [Castanea mollissima][more]
Match NameE-valueIdentityDescription
A0A0A0LCY66.15e-3154.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G665100 PE=4 SV=1[more]
A0A5N6QN791.27e-0433.33Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004867 PE=3 SV=1[more]
A0A7N2REW61.82e-0431.90Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031425NPR1/NH1-interacting proteinPFAMPF15699NPR1_interactcoord: 17..129
e-value: 1.1E-7
score: 32.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g195890.m01Csor.00g195890.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010112 regulation of systemic acquired resistance