Csor.00g195890 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATTCCGGCAAGAGGAAGCGGAAGGAGAATGACGGCAATCGCAATGAGAGCGACGAGGCGGATGTCGAGAAATTCATGGAGATCGTCGAGAAATTCCGCGCTCCGTACGACTGGTTTAGGGCTAAAATGTCCGGTTCCGTAGCGAATGGCGAGGATCAGAGAATGAAGAAGAAGAAGAAGAAGAAGATTGTTGAAGACGATTCGAAGCGAGGCGACGTTTGGATGCCGTTTTTTCTTCTGGAAGATTTCGAGGAAGAGGAGGTTATCAAATTCTGGAAATCCACGGCGCTAAGGAAATCGGAGACGACGGCGACGGCGACGGCGGCGACAACGATGGACGGAGGGAGCGAGGAGAAGGAGAATAACGAAGGGTTAGACCTTCGCCTCTGTCTTTGA ATGGAGGATTCCGGCAAGAGGAAGCGGAAGGAGAATGACGGCAATCGCAATGAGAGCGACGAGGCGGATGTCGAGAAATTCATGGAGATCGTCGAGAAATTCCGCGCTCCGTACGACTGGTTTAGGGCTAAAATGTCCGGTTCCGTAGCGAATGGCGAGGATCAGAGAATGAAGAAGAAGAAGAAGAAGAAGATTGTTGAAGACGATTCGAAGCGAGGCGACGTTTGGATGCCGTTTTTTCTTCTGGAAGATTTCGAGGAAGAGGAGGTTATCAAATTCTGGAAATCCACGGCGCTAAGGAAATCGGAGACGACGGCGACGGCGACGGCGGCGACAACGATGGACGGAGGGAGCGAGGAGAAGGAGAATAACGAAGGGTTAGACCTTCGCCTCTGTCTTTGA ATGGAGGATTCCGGCAAGAGGAAGCGGAAGGAGAATGACGGCAATCGCAATGAGAGCGACGAGGCGGATGTCGAGAAATTCATGGAGATCGTCGAGAAATTCCGCGCTCCGTACGACTGGTTTAGGGCTAAAATGTCCGGTTCCGTAGCGAATGGCGAGGATCAGAGAATGAAGAAGAAGAAGAAGAAGAAGATTGTTGAAGACGATTCGAAGCGAGGCGACGTTTGGATGCCGTTTTTTCTTCTGGAAGATTTCGAGGAAGAGGAGGTTATCAAATTCTGGAAATCCACGGCGCTAAGGAAATCGGAGACGACGGCGACGGCGACGGCGGCGACAACGATGGACGGAGGGAGCGAGGAGAAGGAGAATAACGAAGGGTTAGACCTTCGCCTCTGTCTTTGA MEDSGKRKRKENDGNRNESDEADVEKFMEIVEKFRAPYDWFRAKMSGSVANGEDQRMKKKKKKKIVEDDSKRGDVWMPFFLLEDFEEEEVIKFWKSTALRKSETTATATAATTMDGGSEEKENNEGLDLRLCL Homology
BLAST of Csor.00g195890 vs. NCBI nr
Match: KAG6606917.1 (hypothetical protein SDJN03_00259, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 258 bits (660), Expect = 1.07e-86 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Csor.00g195890 vs. NCBI nr
Match: KAG6581317.1 (hypothetical protein SDJN03_21319, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123 bits (308), Expect = 4.91e-33 Identity = 80/144 (55.56%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of Csor.00g195890 vs. NCBI nr
Match: KGN58537.1 (hypothetical protein Csa_002705 [Cucumis sativus]) HSP 1 Score: 117 bits (292), Expect = 1.27e-30 Identity = 77/141 (54.61%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of Csor.00g195890 vs. NCBI nr
Match: KAE8008346.1 (hypothetical protein FH972_004867 [Carpinus fangiana]) HSP 1 Score: 49.3 bits (116), Expect = 2.62e-04 Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 0
BLAST of Csor.00g195890 vs. NCBI nr
Match: KAF3959565.1 (hypothetical protein CMV_015637 [Castanea mollissima]) HSP 1 Score: 48.9 bits (115), Expect = 2.79e-04 Identity = 39/118 (33.05%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of Csor.00g195890 vs. ExPASy TrEMBL
Match: A0A0A0LCY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G665100 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 6.15e-31 Identity = 77/141 (54.61%), Postives = 92/141 (65.25%), Query Frame = 0
BLAST of Csor.00g195890 vs. ExPASy TrEMBL
Match: A0A5N6QN79 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004867 PE=3 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.27e-04 Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 0
BLAST of Csor.00g195890 vs. ExPASy TrEMBL
Match: A0A7N2REW6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.82e-04 Identity = 37/116 (31.90%), Postives = 55/116 (47.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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