Csor.00g194790 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g194790
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 1899271 .. 1901271 (+)
RNA-Seq ExpressionCsor.00g194790
SyntenyCsor.00g194790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATATCTTCTCCGATGAGACGGTTGGTGTCGTAGGAGGCAATGACGCCGGTGGGGAGGAGGAGTTGAAGAAGAAGGACAAAGATGGTGGGAATGATTGTAGCCATGGTGCGGTGGTGAGTGAGTGAAAAAATGGTGAGGAGGAAGATGAAGTTTAATGGAAGGATATTCAATTTTGGTAGATGGGGAAGTTGAGCTTGGATTCGATTTCATTTAATGATGGATTGCCTCGATTCGATTTGATTTGTAAACCACATGATATAATCGACTAGAATGGGAAGAACGATGAATTTAGATTTCATCGTTTAACAATTCCATAGATGATAGATATTATCAATTTTGGGTCGTTACGTATCGTTGTTAGCCTTACAAGTTTAAAATGTGTTTATTGGGGAGAGATTTTAATATCCTCGTAAGCAATGTTTCGTTCTCTCTCCAACTGATGTGAGATCTCACAATCCACCCTGTTGGGGACCAACATCCTTATCCTTGTTGACACGGCTGACACTGCATAGTGTCAATCCACCCTCTTGAGAGCTAGCATCCTTGCTGGCATACTATATAGTGTCAATCCACCTTCTTGGGGGCCAACATCCTTGCTGGACACTACTTGGGGGCCAACATCCTTGCTGGCACACCGCATAGTATCAATTCACCCTCTTGGGGGCCAACATCCTTGCTGACACAGGGCATAGCACACTACATAGTGTCAATCCACCCTCTTGGGAGCCAATATCCTTGCTGACACACTGCATAGCACACTGCATAGTGTCAATCCACCATCTTGTGGACCAACATCCTTGCTGACACACTACATAGTGTCAATCCACCCTCTTGAGGGCCAACATCCTTGCGGACACCCTGCATAGTGTCAATCTACCCTCTTGGGGGCCAACATCCTTGCTGACACACTACATAGTGTCGGCTATGATATTATTTGTAACAGCTCAAGCTCATCGTTAATAGATAATGTTTATTTTGATCCGTTACATATCACCGTCAGCCTCACGAATAAAAAAATTAATTACGTTAAAAATAATATATTTTAAAAAATAGTGGGTATGAATAAGTTATAATATATTTAATTTTCGATGTTACGTATTGACATCTTAGGTTAGGTATTTTGATGTTCATACTTGAATTTATTAATTGTTTTATGCATCGAAGTTGCTCATAATTTTAATTATGTGATGTTTTCAACATTTTAATTATTACAATTTGAAATTTACATTTCTAATTTTCTTATTCAATTAAAGAAATTTTCATAGGGTATTTATTATTTTATTCCTTTACAACTTTCAAAGTCAACTTTTTTTTTTTTTAATATTTGAATTATAGAAATAAATGGGAAAAGATAATAATATTGTTTTATAAATATAAATTTATAAATAAGACTAAGTAAAATTTAGATAAAATATTATAATAAAAACATTAAACAAATATGATAAAACAAGAAGCGTTGACCAAACCAATAGCATTATAAATTAACCTCATCTTCATAACAAAGAGCCCACCACCCTTCCTCCTTCCGCCGTCGTCTTCCGTTACCGCCACCACCATGGCTGCAACTATGCCGATGAAACCCGCCACCATAGCGGTCGTGATTTTGCTGCTCGTCTCGACCGGTTGCGATGCTTTTGCACGTACCAAACCACTTTTCAACCACACCCAAGGTGAGTTAATTTGCTATTCAAAAATTTGAAAATCCTAAAACCTTTTATGTTTATAGTAAAAGTAGTGTCTTGAATGCCATAGGTCCCGGAAAACACGTCATCGGAGACGATATCGACACCGAGTTTCTTATGGAATCGCATATTAGTAGGGTACTTGCGGAGGAGGATGAGCTTAGGTTTGAAACCATGAGGAGCCCTAACCCCAACATTGCATCGGTGGTCGACTGCGAACGACCGCCACGCTTCGACAGTTGCCTCGGCGAAGGAAAGAACAATCCGCCGTCCGAAAACTGCGATCCCTTCAATCGGGCTAATCCTTGTTGA

mRNA sequence

ATGGATGATATCTTCTCCGATGAGACGGTTGGTGTCGTAGGAGGCAATGACGCCGGTGGGGAGGAGGAGTTGAAGAAGAAGGACAAAGATGGTGGGAATGATTGTAGCCATGGTGCGGTGAGCCCACCACCCTTCCTCCTTCCGCCGTCGTCTTCCGTTACCGCCACCACCATGGCTGCAACTATGCCGATGAAACCCGCCACCATAGCGGTCGTGATTTTGCTGCTCGTCTCGACCGGTTGCGATGCTTTTGCACGTACCAAACCACTTTTCAACCACACCCAAGGTCCCGGAAAACACGTCATCGGAGACGATATCGACACCGAGTTTCTTATGGAATCGCATATTAGTAGGGTACTTGCGGAGGAGGATGAGCTTAGGTTTGAAACCATGAGGAGCCCTAACCCCAACATTGCATCGGTGGTCGACTGCGAACGACCGCCACGCTTCGACAGTTGCCTCGGCGAAGGAAAGAACAATCCGCCGTCCGAAAACTGCGATCCCTTCAATCGGGCTAATCCTTGTTGA

Coding sequence (CDS)

ATGGATGATATCTTCTCCGATGAGACGGTTGGTGTCGTAGGAGGCAATGACGCCGGTGGGGAGGAGGAGTTGAAGAAGAAGGACAAAGATGGTGGGAATGATTGTAGCCATGGTGCGGTGAGCCCACCACCCTTCCTCCTTCCGCCGTCGTCTTCCGTTACCGCCACCACCATGGCTGCAACTATGCCGATGAAACCCGCCACCATAGCGGTCGTGATTTTGCTGCTCGTCTCGACCGGTTGCGATGCTTTTGCACGTACCAAACCACTTTTCAACCACACCCAAGGTCCCGGAAAACACGTCATCGGAGACGATATCGACACCGAGTTTCTTATGGAATCGCATATTAGTAGGGTACTTGCGGAGGAGGATGAGCTTAGGTTTGAAACCATGAGGAGCCCTAACCCCAACATTGCATCGGTGGTCGACTGCGAACGACCGCCACGCTTCGACAGTTGCCTCGGCGAAGGAAAGAACAATCCGCCGTCCGAAAACTGCGATCCCTTCAATCGGGCTAATCCTTGTTGA

Protein sequence

MDDIFSDETVGVVGGNDAGGEEELKKKDKDGGNDCSHGAVSPPPFLLPPSSSVTATTMAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC
Homology
BLAST of Csor.00g194790 vs. NCBI nr
Match: KAG6607027.1 (hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 353 bits (907), Expect = 5.42e-123
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0

Query: 1   MDDIFSDETVGVVGGNDAGGEEELKKKDKDGGNDCSHGAVSPPPFLLPPSSSVTATTMAA 60
           MDDIFSDETVGVVGGNDAGGEEELKKKDKDGGNDCSHGAVSPPPFLLPPSSSVTATTMAA
Sbjct: 1   MDDIFSDETVGVVGGNDAGGEEELKKKDKDGGNDCSHGAVSPPPFLLPPSSSVTATTMAA 60

Query: 61  TMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVL 120
           TMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVL
Sbjct: 61  TMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHISRVL 120

Query: 121 AEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175
           AEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC
Sbjct: 121 AEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175

BLAST of Csor.00g194790 vs. NCBI nr
Match: XP_022948337.1 (uncharacterized protein LOC111452043 [Cucurbita moschata])

HSP 1 Score: 238 bits (607), Expect = 4.23e-78
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0

Query: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 117
           MAATMPMKP TIAVVILLLVSTGCDAFA TKPLFNHTQGPGKHVIGDDIDTEFLMESHIS
Sbjct: 1   MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 118 RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175
           RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Csor.00g194790 vs. NCBI nr
Match: KAG7036723.1 (hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238 bits (606), Expect = 6.00e-78
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0

Query: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 117
           MAATMPMKPATIAVVILLLVSTGCDAFA TKPLFNHTQGPGKHVIGDDID EFLMESHIS
Sbjct: 1   MAATMPMKPATIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDNEFLMESHIS 60

Query: 118 RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175
           RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Csor.00g194790 vs. NCBI nr
Match: XP_022998176.1 (uncharacterized protein LOC111492901 [Cucurbita maxima])

HSP 1 Score: 233 bits (594), Expect = 4.04e-76
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0

Query: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 117
           MAATM MKPATIAVVILLLVST CDAFA TKPLFNHTQGPGKHVIGDDIDTEFLMESHIS
Sbjct: 1   MAATMSMKPATIAVVILLLVSTNCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 118 RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175
           RVLAEEDELRFETMRSPNPNIASVVDCERPPR+DSCLGEGKNNPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRYDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Csor.00g194790 vs. NCBI nr
Match: KAE8650593.1 (hypothetical protein Csa_011480, partial [Cucumis sativus])

HSP 1 Score: 127 bits (318), Expect = 1.04e-34
Identity = 60/78 (76.92%), Postives = 70/78 (89.74%), Query Frame = 0

Query: 98  GKHVIGDDIDTEFLMESHISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEG 157
           GK +IGD IDT+FLMESH+SR+LAE   LRFETMR+PN N ASVV+CERPPR+DSCLGE 
Sbjct: 2   GKRLIGD-IDTDFLMESHVSRILAE---LRFETMRTPNANSASVVNCERPPRYDSCLGEA 61

Query: 158 KNNPPSENCDPFNRANPC 175
           ++NPPSENCDP+NRANPC
Sbjct: 62  RDNPPSENCDPYNRANPC 75

BLAST of Csor.00g194790 vs. ExPASy TrEMBL
Match: A0A6J1G8W5 (uncharacterized protein LOC111452043 OS=Cucurbita moschata OX=3662 GN=LOC111452043 PE=4 SV=1)

HSP 1 Score: 238 bits (607), Expect = 2.05e-78
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0

Query: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 117
           MAATMPMKP TIAVVILLLVSTGCDAFA TKPLFNHTQGPGKHVIGDDIDTEFLMESHIS
Sbjct: 1   MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 118 RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175
           RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Csor.00g194790 vs. ExPASy TrEMBL
Match: A0A6J1K9J3 (uncharacterized protein LOC111492901 OS=Cucurbita maxima OX=3661 GN=LOC111492901 PE=4 SV=1)

HSP 1 Score: 233 bits (594), Expect = 1.96e-76
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0

Query: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 117
           MAATM MKPATIAVVILLLVST CDAFA TKPLFNHTQGPGKHVIGDDIDTEFLMESHIS
Sbjct: 1   MAATMSMKPATIAVVILLLVSTNCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 118 RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175
           RVLAEEDELRFETMRSPNPNIASVVDCERPPR+DSCLGEGKNNPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRYDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Csor.00g194790 vs. ExPASy TrEMBL
Match: A0A0A0L9X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 1.16e-46
Identity = 79/117 (67.52%), Postives = 98/117 (83.76%), Query Frame = 0

Query: 59  AATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHISR 118
           AAT+ ++  T+A+V LLLV+ GCDAF  +KP+FN +   GK +IGD IDT+FLMESH+SR
Sbjct: 3   AATLSIRT-TLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLIGD-IDTDFLMESHVSR 62

Query: 119 VLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175
           +LAE   LRFETMR+PN N ASVV+CERPPR+DSCLGE ++NPPSENCDP+NRANPC
Sbjct: 63  ILAE---LRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

BLAST of Csor.00g194790 vs. ExPASy TrEMBL
Match: A0A6J1CP71 (uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013278 PE=4 SV=1)

HSP 1 Score: 125 bits (315), Expect = 5.08e-34
Identity = 69/120 (57.50%), Postives = 83/120 (69.17%), Query Frame = 0

Query: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNH-TQGPGKHVIGD-DIDTEFLMESH 117
           MA    M P  +A+ ILL     CDA   +K L N+ T G  K +IGD DI +EFLME H
Sbjct: 1   MATAAVMIPTVMALAILLPNPIDCDALTTSKRLLNNETWGNHKRLIGDEDIGSEFLMELH 60

Query: 118 ISRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175
           +SR+LAE   LRF+TM +PN N+ SV DCERPPR+DSCLGE +N PP+ENC  FNRANPC
Sbjct: 61  LSRILAES--LRFQTMTTPNANMGSVRDCERPPRYDSCLGEKRNTPPAENCGTFNRANPC 118

BLAST of Csor.00g194790 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 1.99e-33
Identity = 68/119 (57.14%), Postives = 82/119 (68.91%), Query Frame = 0

Query: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGD-DIDTEFLMESHI 117
           MAA   M PA +A++ILLL  T  DA    KPL N T   GK++IGD DID+EFLMESHI
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 118 SRVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175
           SR+LA   +  F+T ++ + N AS   CERPPR+DSCLG+  NNPP ENC  FNR NPC
Sbjct: 61  SRILAGSQD--FQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6607027.15.42e-123100.00hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022948337.14.23e-7898.31uncharacterized protein LOC111452043 [Cucurbita moschata][more]
KAG7036723.16.00e-7898.31hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022998176.14.04e-7696.61uncharacterized protein LOC111492901 [Cucurbita maxima][more]
KAE8650593.11.04e-3476.92hypothetical protein Csa_011480, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1G8W52.05e-7898.31uncharacterized protein LOC111452043 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
A0A6J1K9J31.96e-7696.61uncharacterized protein LOC111492901 OS=Cucurbita maxima OX=3661 GN=LOC111492901... [more]
A0A0A0L9X51.16e-4667.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1[more]
A0A6J1CP715.08e-3457.50uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1KBP51.99e-3357.14uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..34

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g194790.m01Csor.00g194790.m01mRNA