Csor.00g194780 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g194780
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 1902735 .. 1903129 (+)
RNA-Seq ExpressionCsor.00g194780
SyntenyCsor.00g194780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAGCCGCACTGATGATACTCGCCATGATCATAATTCTGCTGCTCAACCCAACTGGATGTGACACTTCCGGTAAGTTTGGAATCACTTTTTAAAAACCAAATTAATTTATAATAATTTTATGAACTCATTGTATCTTCATCGCGACCCAGATGCAAAGCGAAGCCTGGTCGGAGACGAAAACATCGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCAGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCGACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG

mRNA sequence

ATGGCTGCAGCCGCACTGATGATACTCGCCATGATCATAATTCTGCTGCTCAACCCAACTGGATGTGACACTTCCGATGCAAAGCGAAGCCTGGTCGGAGACGAAAACATCGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCAGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCGACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG

Coding sequence (CDS)

ATGGCTGCAGCCGCACTGATGATACTCGCCATGATCATAATTCTGCTGCTCAACCCAACTGGATGTGACACTTCCGATGCAAAGCGAAGCCTGGTCGGAGACGAAAACATCGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCAGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCGACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG

Protein sequence

MAAAALMILAMIIILLLNPTGCDTSDAKRSLVGDENIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC
Homology
BLAST of Csor.00g194780 vs. NCBI nr
Match: KAG6607028.1 (hypothetical protein SDJN03_00370, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036724.1 hypothetical protein SDJN02_00344 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208 bits (530), Expect = 8.47e-68
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0

Query: 1   MAAAALMILAMIIILLLNPTGCDTSDAKRSLVGDENIESEFLMSLHISRVLAESQGFETS 60
           MAAAALMILAMIIILLLNPTGCDTSDAKRSLVGDENIESEFLMSLHISRVLAESQGFETS
Sbjct: 1   MAAAALMILAMIIILLLNPTGCDTSDAKRSLVGDENIESEFLMSLHISRVLAESQGFETS 60

Query: 61  ATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104
           ATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC
Sbjct: 61  ATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104

BLAST of Csor.00g194780 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 123 bits (308), Expect = 8.72e-34
Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 0

Query: 1   MAAAALMILAM--IIILLLNPTGCD-----------TSDAKRSLVGDENIESEFLMSLHI 60
           MAAAA+MI A   I+ILLLNPT  D           TS A + L+GD++I+SEFLM  HI
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104
           SR+LA SQ F+TS T++A + + G C+RPPRYDSCLG+K + PPPENCG FNR +PC
Sbjct: 61  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194780 vs. NCBI nr
Match: KAG6607029.1 (hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036725.1 hypothetical protein SDJN02_00345, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120 bits (300), Expect = 1.44e-32
Identity = 66/117 (56.41%), Postives = 83/117 (70.94%), Query Frame = 0

Query: 1   MAAAALMILAM--IIILLLNPTGCD-----------TSDAKRSLVGDENIESEFLMSLHI 60
           MAAAA++I A   I+ILLLNPT  D           TS A + L+GD++I+SEFLM  HI
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104
           SR+LA SQ F+TS T++A + + G C RPPRYDSCLG+K + PPPENCG FNR +PC
Sbjct: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194780 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 119 bits (298), Expect = 2.89e-32
Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 0

Query: 1   MAAAALMILAM--IIILLLNPTGCD-----------TSDAKRSLVGDENIESEFLMSLHI 60
           MAAAA++I A   I+ILLLNPT  D           TS A + L+GD++++SEFLM  HI
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHI 60

Query: 61  SRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104
           SR+LA SQ F+TS T++A + + G C RPPRYDSCLG+K + PPPENCG FNR +PC
Sbjct: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194780 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117 bits (293), Expect = 1.67e-31
Identity = 65/117 (55.56%), Postives = 80/117 (68.38%), Query Frame = 0

Query: 1   MAAAALMILAM--IIILLLNPTGCD-----------TSDAKRSLVGDENIESEFLMSLHI 60
           MA AA MI A   I+ILLLNP   D           TS A + L+GD++I+SEFLM  HI
Sbjct: 1   MATAAAMIPAAMAIMILLLNPINSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104
           SR+LA SQ F+TS T++A + + G C RPPRYDSCLG+K + PPPENCG FNR +PC
Sbjct: 61  SRILAGSQNFQTSNTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 123 bits (308), Expect = 4.22e-34
Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 0

Query: 1   MAAAALMILAM--IIILLLNPTGCD-----------TSDAKRSLVGDENIESEFLMSLHI 60
           MAAAA+MI A   I+ILLLNPT  D           TS A + L+GD++I+SEFLM  HI
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104
           SR+LA SQ F+TS T++A + + G C+RPPRYDSCLG+K + PPPENCG FNR +PC
Sbjct: 61  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 1.40e-32
Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 0

Query: 1   MAAAALMILAM--IIILLLNPTGCD-----------TSDAKRSLVGDENIESEFLMSLHI 60
           MAAAA++I A   I+ILLLNPT  D           TS A + L+GD++++SEFLM  HI
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHI 60

Query: 61  SRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104
           SR+LA SQ F+TS T++A + + G C RPPRYDSCLG+K + PPPENCG FNR +PC
Sbjct: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A0A0L711 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 1.25e-31
Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 0

Query: 31  LVGDENIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTP 90
           +V +E+I+S F+M  HISR+LA+SQ FETS+T+NAT+ + GECDRPPRYDSCLG KR+TP
Sbjct: 47  MVEEEDIKSNFVMESHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTP 106

Query: 91  PPENCGPFNREHPC 104
           PP+NC  FNREHPC
Sbjct: 107 PPQNCSTFNREHPC 120

BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A6J1CP71 (uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013278 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 3.37e-31
Identity = 65/118 (55.08%), Postives = 80/118 (67.80%), Query Frame = 0

Query: 1   MAAAALMI--LAMIIILLLNPTGCDT-SDAKR-----------SLVGDENIESEFLMSLH 60
           MA AA+MI  +  + ILL NP  CD  + +KR            L+GDE+I SEFLM LH
Sbjct: 1   MATAAVMIPTVMALAILLPNPIDCDALTTSKRLLNNETWGNHKRLIGDEDIGSEFLMELH 60

Query: 61  ISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104
           +SR+LAES  F+T  T NA   +V +C+RPPRYDSCLGEKR+TPP ENCG FNR +PC
Sbjct: 61  LSRILAESLRFQTMTTPNANMGSVRDCERPPRYDSCLGEKRNTPPAENCGTFNRANPC 118

BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A0A0LCJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 110 bits (274), Expect = 6.61e-29
Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 0

Query: 1   MAAAALMILAMII--ILLLN-PTGCD------------TSDAKRSLVGDENIESEFLMSL 60
           M A+ALMI A ++  ILLL+ P+ CD            +S   + ++G+E++E EFLM  
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 61  HISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC 104
           HISR+LA S+ ++T++T+NA + + G CDRPPRYDSCLG+KR+ PPP NC P+NR +PC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6607028.18.47e-68100.00hypothetical protein SDJN03_00370, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022998105.18.72e-3457.26uncharacterized protein LOC111492854 [Cucurbita maxima][more]
KAG6607029.11.44e-3256.41hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022948338.12.89e-3255.56uncharacterized protein LOC111452044 [Cucurbita moschata][more]
XP_023523220.11.67e-3155.56uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1KBP54.22e-3457.26uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854... [more]
A0A6J1G9271.40e-3255.56uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
A0A0A0L7111.25e-3168.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1[more]
A0A6J1CP713.37e-3155.08uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A0A0LCJ46.61e-2948.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g194780.m01Csor.00g194780.m01mRNA