Csor.00g194780 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCAGCCGCACTGATGATACTCGCCATGATCATAATTCTGCTGCTCAACCCAACTGGATGTGACACTTCCGGTAAGTTTGGAATCACTTTTTAAAAACCAAATTAATTTATAATAATTTTATGAACTCATTGTATCTTCATCGCGACCCAGATGCAAAGCGAAGCCTGGTCGGAGACGAAAACATCGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCAGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCGACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG ATGGCTGCAGCCGCACTGATGATACTCGCCATGATCATAATTCTGCTGCTCAACCCAACTGGATGTGACACTTCCGATGCAAAGCGAAGCCTGGTCGGAGACGAAAACATCGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCAGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCGACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG ATGGCTGCAGCCGCACTGATGATACTCGCCATGATCATAATTCTGCTGCTCAACCCAACTGGATGTGACACTTCCGATGCAAAGCGAAGCCTGGTCGGAGACGAAAACATCGAGTCGGAGTTTCTTATGTCGTTGCACATCAGCCGGGTGTTGGCAGAATCCCAAGGGTTCGAAACCAGCGCCACTAGCAACGCTACCGAACCTGCCGTCGGGGAATGCGACAGGCCGCCACGCTACGACAGCTGCCTTGGCGAGAAAAGAAGTACTCCGCCGCCGGAAAATTGTGGACCCTTCAATCGTGAACATCCCTGTTAG MAAAALMILAMIIILLLNPTGCDTSDAKRSLVGDENIESEFLMSLHISRVLAESQGFETSATSNATEPAVGECDRPPRYDSCLGEKRSTPPPENCGPFNREHPC Homology
BLAST of Csor.00g194780 vs. NCBI nr
Match: KAG6607028.1 (hypothetical protein SDJN03_00370, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036724.1 hypothetical protein SDJN02_00344 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208 bits (530), Expect = 8.47e-68 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of Csor.00g194780 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima]) HSP 1 Score: 123 bits (308), Expect = 8.72e-34 Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 0
BLAST of Csor.00g194780 vs. NCBI nr
Match: KAG6607029.1 (hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036725.1 hypothetical protein SDJN02_00345, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 120 bits (300), Expect = 1.44e-32 Identity = 66/117 (56.41%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of Csor.00g194780 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata]) HSP 1 Score: 119 bits (298), Expect = 2.89e-32 Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of Csor.00g194780 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117 bits (293), Expect = 1.67e-31 Identity = 65/117 (55.56%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1) HSP 1 Score: 123 bits (308), Expect = 4.22e-34 Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 0
BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1) HSP 1 Score: 119 bits (298), Expect = 1.40e-32 Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A0A0L711 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 1.25e-31 Identity = 51/74 (68.92%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A6J1CP71 (uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013278 PE=4 SV=1) HSP 1 Score: 115 bits (289), Expect = 3.37e-31 Identity = 65/118 (55.08%), Postives = 80/118 (67.80%), Query Frame = 0
BLAST of Csor.00g194780 vs. ExPASy TrEMBL
Match: A0A0A0LCJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1) HSP 1 Score: 110 bits (274), Expect = 6.61e-29 Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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