Csor.00g192840 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g192840
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	CCT domain-containing protein
Location	Csor_Chr01: 2989222 .. 2989921 (+)
RNA-Seq Expression	Csor.00g192840
Synteny	Csor.00g192840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAGTCACTCAGCCGCCACCGCAGATGCCTCCCTGAGCCACCTCCAACCGCCGCCACCTTTCCCGTCGTTCTCAAATTTGATATATTCCCACAACCCTTTCCCAATGGTAGAGGCATTGGAGGTTAGTTATAGTGGGAGTAGTAGTGGAGGTTGTAGTTATAGTAGCTACGGGTCTCCAACATCGCACCCTGGGCTAAGCCATGGTCCAACCTCTCGCCGACCACTCACAAGGGCTTACAGCTCCGGTCATAATGAGAGAGGAGGCGAAGAGAGGGCATGGTCCAGTGAAAGCAGTTTGATAATAGAAGGAATGAGAAGAGCTTCCCCATATACTCCCCAAGAGAAGAGACACAGAATTGAGAGATACAAAACCAAGAGAAACCAAAGGAATTTTAATAAGAAGATTAAGGTAATTAATTTTATTAATTTTTTTTTTTTTTAATTTTATGTATATAAAATGTTAAAAGTTCGAATTTTTATTAGTCGGGAAAATTTGGCAGTATGAATGTAGGAAGACACTGGCAGATAGTAGAAAGCGCATACGAGGGAGATTTGCGAGAAATGAAGAAGCTGAGAATAGTAACTCGACTAGCTCGCCGGTCGAGACATGGAGCTGCTACGACAATGCCATGGCCGAGGACGATGCCTCTTGGACAACCTTTCTTGATTCTTACTCTCTTAACTTCGTTCCTTGA

mRNA sequence

ATGCACAGTCACTCAGCCGCCACCGCAGATGCCTCCCTGAGCCACCTCCAACCGCCGCCACCTTTCCCGTCGTTCTCAAATTTGATATATTCCCACAACCCTTTCCCAATGGTAGAGGCATTGGAGGTTAGTTATAGTGGGAGTAGTAGTGGAGGTTGTAGTTATAGTAGCTACGGGTCTCCAACATCGCACCCTGGGCTAAGCCATGGTCCAACCTCTCGCCGACCACTCACAAGGGCTTACAGCTCCGGTCATAATGAGAGAGGAGGCGAAGAGAGGGCATGGTCCAGTGAAAGCAGTTTGATAATAGAAGGAATGAGAAGAGCTTCCCCATATACTCCCCAAGAGAAGAGACACAGAATTGAGAGATACAAAACCAAGAGAAACCAAAGGAATTTTAATAAGAAGATTAAGTATGAATGTAGGAAGACACTGGCAGATAGTAGAAAGCGCATACGAGGGAGATTTGCGAGAAATGAAGAAGCTGAGAATAGTAACTCGACTAGCTCGCCGGTCGAGACATGGAGCTGCTACGACAATGCCATGGCCGAGGACGATGCCTCTTGGACAACCTTTCTTGATTCTTACTCTCTTAACTTCGTTCCTTGA

Coding sequence (CDS)

ATGCACAGTCACTCAGCCGCCACCGCAGATGCCTCCCTGAGCCACCTCCAACCGCCGCCACCTTTCCCGTCGTTCTCAAATTTGATATATTCCCACAACCCTTTCCCAATGGTAGAGGCATTGGAGGTTAGTTATAGTGGGAGTAGTAGTGGAGGTTGTAGTTATAGTAGCTACGGGTCTCCAACATCGCACCCTGGGCTAAGCCATGGTCCAACCTCTCGCCGACCACTCACAAGGGCTTACAGCTCCGGTCATAATGAGAGAGGAGGCGAAGAGAGGGCATGGTCCAGTGAAAGCAGTTTGATAATAGAAGGAATGAGAAGAGCTTCCCCATATACTCCCCAAGAGAAGAGACACAGAATTGAGAGATACAAAACCAAGAGAAACCAAAGGAATTTTAATAAGAAGATTAAGTATGAATGTAGGAAGACACTGGCAGATAGTAGAAAGCGCATACGAGGGAGATTTGCGAGAAATGAAGAAGCTGAGAATAGTAACTCGACTAGCTCGCCGGTCGAGACATGGAGCTGCTACGACAATGCCATGGCCGAGGACGATGCCTCTTGGACAACCTTTCTTGATTCTTACTCTCTTAACTTCGTTCCTTGA

Protein sequence

MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPMVEALEVSYSGSSSGGCSYSSYGSPTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDNAMAEDDASWTTFLDSYSLNFVP

Homology

[Close]

BLAST of Csor.00g192840 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 2.7e-05
Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 105 GMRRASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAEN 164
           G +RA P T  E+  R+ RY+ KR  R F K I+Y  RK  A+ R RI+GRFA+  +   
Sbjct: 283 GTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNE 342

Query: 165 SN 167
           SN
Sbjct: 343 SN 344

[Close]

BLAST of Csor.00g192840 vs. NCBI nr
Match: KAG6607222.1 (Zinc finger protein CONSTANS-LIKE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399 bits (1024), Expect = 6.14e-140
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPMVEALEVSYSGSSSGGCSYSSYGS 60
           MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPMVEALEVSYSGSSSGGCSYSSYGS
Sbjct: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPMVEALEVSYSGSSSGGCSYSSYGS 60

Query: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120
           PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR
Sbjct: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120

Query: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180
           IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN
Sbjct: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180

Query: 181 AMAEDDASWTTFLDSYSLNFVP 202
           AMAEDDASWTTFLDSYSLNFVP
Sbjct: 181 AMAEDDASWTTFLDSYSLNFVP 202

[Close]

BLAST of Csor.00g192840 vs. NCBI nr
Match: KAG7036907.1 (Zinc finger protein CONSTANS-LIKE 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397 bits (1019), Expect = 3.55e-139
Identity = 201/202 (99.50%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPMVEALEVSYSGSSSGGCSYSSYGS 60
           MHSHSAATADASLSHLQPPPPFPSFSNLI+SHNPFPMVEALEVSYSGSSSGGCSYSSYGS
Sbjct: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIHSHNPFPMVEALEVSYSGSSSGGCSYSSYGS 60

Query: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120
           PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR
Sbjct: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120

Query: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180
           IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN
Sbjct: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180

Query: 181 AMAEDDASWTTFLDSYSLNFVP 202
           AMAEDDASWTTFLDSYSLNFVP
Sbjct: 181 AMAEDDASWTTFLDSYSLNFVP 202

[Close]

BLAST of Csor.00g192840 vs. NCBI nr
Match: XP_022949263.1 (zinc finger protein CONSTANS-LIKE 4-like [Cucurbita moschata])

HSP 1 Score: 384 bits (986), Expect = 3.56e-134
Identity = 197/202 (97.52%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPMVEALEVSYSGSSSGGCSYSSYGS 60
           MHSH+AATADASLSHLQPPPPFPSFSN IYSHNP PMVEALEVSYSGSSSGGCS  SYGS
Sbjct: 1   MHSHAAATADASLSHLQPPPPFPSFSNFIYSHNPSPMVEALEVSYSGSSSGGCS--SYGS 60

Query: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120
           PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR
Sbjct: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120

Query: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180
           IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN
Sbjct: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180

Query: 181 AMAEDDASWTTFLDSYSLNFVP 202
           AMAEDDASWTTFLDSYSLNFVP
Sbjct: 181 AMAEDDASWTTFLDSYSLNFVP 200

[Close]

BLAST of Csor.00g192840 vs. NCBI nr
Match: XP_022998187.1 (zinc finger protein CONSTANS-LIKE 4-like [Cucurbita maxima])

HSP 1 Score: 383 bits (984), Expect = 7.18e-134
Identity = 196/202 (97.03%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPMVEALEVSYSGSSSGGCSYSSYGS 60
           MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFP+VEALEVSYSGSSSGGCS  SYGS
Sbjct: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPIVEALEVSYSGSSSGGCS--SYGS 60

Query: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120
           PTSHPGLSHGP+SRRPLTRAYSSGHNER GEERAWSSESSLIIEGMRRASPYTPQEKRHR
Sbjct: 61  PTSHPGLSHGPSSRRPLTRAYSSGHNERRGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120

Query: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180
           IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSP+ETWSCYDN
Sbjct: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPIETWSCYDN 180

Query: 181 AMAEDDASWTTFLDSYSLNFVP 202
           AMAEDDASWTTFLDSYSLNFVP
Sbjct: 181 AMAEDDASWTTFLDSYSLNFVP 200

[Close]

BLAST of Csor.00g192840 vs. NCBI nr
Match: XP_023524572.1 (uncharacterized protein LOC111788469 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313 bits (802), Expect = 1.20e-106
Identity = 160/166 (96.39%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 37  MVEALEVSYSGSSSGGCSYSSYGSPTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWS 96
           MVEALEVSYSGSSSGGCSYSSYGSPTSHPGLSH PTSRRPLTRAYSSGHNER GEER WS
Sbjct: 1   MVEALEVSYSGSSSGGCSYSSYGSPTSHPGLSHAPTSRRPLTRAYSSGHNERRGEERTWS 60

Query: 97  SESSLIIEGMRRASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRF 156
           SESS+IIEGMRRASPYTPQEKRHRIERYK KRNQRNFNKKIKYECRKTLADSRKRIRGRF
Sbjct: 61  SESSMIIEGMRRASPYTPQEKRHRIERYKIKRNQRNFNKKIKYECRKTLADSRKRIRGRF 120

Query: 157 ARNEEAENSNSTSSPVETWSCYDNAMAEDDASWTTFLDSYSLNFVP 202
           ARNEEAENSNSTSSPVETWSCYDNAM EDDASWTTFLDSYSLNFVP
Sbjct: 121 ARNEEAENSNSTSSPVETWSCYDNAMPEDDASWTTFLDSYSLNFVP 166

[Close]

BLAST of Csor.00g192840 vs. ExPASy TrEMBL
Match: A0A6J1GBJ0 (zinc finger protein CONSTANS-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111452672 PE=4 SV=1)

HSP 1 Score: 384 bits (986), Expect = 1.72e-134
Identity = 197/202 (97.52%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPMVEALEVSYSGSSSGGCSYSSYGS 60
           MHSH+AATADASLSHLQPPPPFPSFSN IYSHNP PMVEALEVSYSGSSSGGCS  SYGS
Sbjct: 1   MHSHAAATADASLSHLQPPPPFPSFSNFIYSHNPSPMVEALEVSYSGSSSGGCS--SYGS 60

Query: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120
           PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR
Sbjct: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120

Query: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180
           IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN
Sbjct: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180

Query: 181 AMAEDDASWTTFLDSYSLNFVP 202
           AMAEDDASWTTFLDSYSLNFVP
Sbjct: 181 AMAEDDASWTTFLDSYSLNFVP 200

[Close]

BLAST of Csor.00g192840 vs. ExPASy TrEMBL
Match: A0A6J1K781 (zinc finger protein CONSTANS-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492912 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 3.48e-134
Identity = 196/202 (97.03%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPMVEALEVSYSGSSSGGCSYSSYGS 60
           MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFP+VEALEVSYSGSSSGGCS  SYGS
Sbjct: 1   MHSHSAATADASLSHLQPPPPFPSFSNLIYSHNPFPIVEALEVSYSGSSSGGCS--SYGS 60

Query: 61  PTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120
           PTSHPGLSHGP+SRRPLTRAYSSGHNER GEERAWSSESSLIIEGMRRASPYTPQEKRHR
Sbjct: 61  PTSHPGLSHGPSSRRPLTRAYSSGHNERRGEERAWSSESSLIIEGMRRASPYTPQEKRHR 120

Query: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPVETWSCYDN 180
           IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSP+ETWSCYDN
Sbjct: 121 IERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENSNSTSSPIETWSCYDN 180

Query: 181 AMAEDDASWTTFLDSYSLNFVP 202
           AMAEDDASWTTFLDSYSLNFVP
Sbjct: 181 AMAEDDASWTTFLDSYSLNFVP 200

[Close]

BLAST of Csor.00g192840 vs. ExPASy TrEMBL
Match: A0A6J1I3X3 (zinc finger protein CONSTANS-LIKE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469436 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 3.51e-61
Identity = 135/234 (57.69%), Postives = 156/234 (66.67%), Query Frame = 0


Query: 1   MHSHSAATADASLSHLQPP------PPFPSFSNLIYSHNPF------PMVEAL-----EV 60
           MH+ S+AT +ASL HL  P      P   SF + I SH+        PM+E       E+
Sbjct: 1   MHAFSSATLEASLCHLPTPDLAVSPPLLASFPHFISSHSSLLASELAPMLEPSGLLPSEL 60

Query: 61  SYSGSSSGGCSYSSYGSPTSHP--GLSHGPTSR--------RPLTRAYSSGHNERGGEER 120
           SYS  SSG CS  SY SPTS P   +SHGP  +          + RAY S ++ +G  E 
Sbjct: 61  SYS-CSSGPCS--SYESPTSKPQRSMSHGPGVQISMLFDLESSVRRAYRS-NDLQGRTEM 120

Query: 121 AWSSESSLIIEGMR-RASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADSRKRI 180
             S+ESSLIIEGM  +A  Y+P+EKR RIE+YKTKRNQRNFNKKIKYECRKTLADSR+RI
Sbjct: 121 TNSNESSLIIEGMSTKACRYSPEEKRQRIEKYKTKRNQRNFNKKIKYECRKTLADSRRRI 180

Query: 181 RGRFARNEEAENSNSTSSPVETWSCYDNAMAE----DDASWTTFLDSYSLNFVP 202
           RGRFARNEE ENSNSTSSP ETWSCYDNA  E    DD SW TFLDSYS+NF+P
Sbjct: 181 RGRFARNEEVENSNSTSSPTETWSCYDNATTEEDGQDDGSWITFLDSYSVNFIP 230

[Close]

BLAST of Csor.00g192840 vs. ExPASy TrEMBL
Match: A0A6J1HLZ0 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464822 PE=4 SV=1)

HSP 1 Score: 193 bits (491), Expect = 1.93e-58
Identity = 134/234 (57.26%), Postives = 154/234 (65.81%), Query Frame = 0


Query: 1   MHSHSAATADASLSHL------QPPPPFPSFSNLIYSHNP----------FPMVEA---- 60
           MH+ S+AT +ASL HL        PP   SF + I SH+            PM+E+    
Sbjct: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASDLVPMLESPGLL 60

Query: 61  -LEVSYSGSSSGGCSYSSYGSPTSHP--GLSHGPTSR--------RPLTRAYSSGHNERG 120
             E+SYS  SSG CS  SYGSPTS P   + H P  +          + RAYS  ++ +G
Sbjct: 61  PSELSYS-CSSGPCS--SYGSPTSKPQRSMRHRPNVQISTLFDLESSVRRAYSF-NDLQG 120

Query: 121 GEERAWSSESSLIIEGMR-RASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADS 180
             E A SSESSLIIEGM  +A  Y+P+EKR RIE+YKTKRNQRNFNKKIKYECRKTLADS
Sbjct: 121 RTEMASSSESSLIIEGMSTKACRYSPEEKRQRIEKYKTKRNQRNFNKKIKYECRKTLADS 180

Query: 181 RKRIRGRFARNEEAENSNSTSSPVETWSCYDNAMAE----DDASWTTFLDSYSL 198
           R+RIRGRFARNEE ENSNSTSSP ETWSCYDNA AE    DD SW TFLDSYS+
Sbjct: 181 RRRIRGRFARNEEVENSNSTSSPTETWSCYDNATAEEVGQDDGSWITFLDSYSV 230

[Close]

BLAST of Csor.00g192840 vs. ExPASy TrEMBL
Match: A0A6J1DVX1 (uncharacterized protein LOC111023585 OS=Momordica charantia OX=3673 GN=LOC111023585 PE=4 SV=1)

HSP 1 Score: 188 bits (477), Expect = 1.15e-56
Identity = 131/235 (55.74%), Postives = 151/235 (64.26%), Query Frame = 0


Query: 1   MHSHSAA------TADASLSHLQPPPPFPSFSNLIYSHNPF--------------PMVEA 60
           MH  SAA      + D ++S L P P  P+FS   YS +P               P  E 
Sbjct: 1   MHGLSAAALCHLHSPDIAISPLPPFPSLPNFSLSHYSPSPLSAYCQLLRCQLDSVPESEG 60

Query: 61  L---EVSYSGSSSGGCSYSSYGSPTSHPGL------SHGP----TSRRPLTRAYSSGHNE 120
           L   EVSYSGSS G CS  S GSPTS PGL      SHG     ++  P+ R +S+G  +
Sbjct: 61  LLNSEVSYSGSS-GPCS--SNGSPTSQPGLIQRSLSSHGLDLQLSALGPVRRVHSAGDLQ 120

Query: 121 RGGEERAWSSESSLIIEGMRRASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLAD 180
            G  ER WSSESSLIIEGM +A  Y+P+EKR RIERYKTKRNQRNFNKKIKYECRKTLAD
Sbjct: 121 -GRAERGWSSESSLIIEGMAKACRYSPEEKRERIERYKTKRNQRNFNKKIKYECRKTLAD 180

Query: 181 SRKRIRGRFARNEEAENSNSTSSPVETWSCYDNAMAEDDASWTTFLDSYSLNFVP 202
           SR+RIRGRFARNEE E+ N T+SPVE+WS    A  EDD SW +FLDS S+N VP
Sbjct: 181 SRRRIRGRFARNEETEHKNFTTSPVESWSY---ATGEDDGSWISFLDSCSVNLVP 228

[Close]

BLAST of Csor.00g192840 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 85/214 (39.72%), Postives = 108/214 (50.47%), Query Frame = 0


Query: 15  HLQPPPPFPSFSNLIYSHNPFPMVEALE------------------VSYSGSSSGGCSYS 74
           H  PPPP    + L+ S N     EA+                    S S   SGG S  
Sbjct: 36  HQFPPPP---LALLMMSQNSLYAAEAVSGFGYFDSGMNGGGGSSSCDSPSSMGSGGESLV 95

Query: 75  SYGSPTSHPGLSHGPTSRR--------PLTRAYSSG---HNERGGEERAWSSESSLIIEG 134
              S +SH G S   T+          P+ RA S+G    + R      W SES+ IIEG
Sbjct: 96  MQRSVSSHNGFSGNYTAAHDFVNDDDGPVRRALSAGDLPRSSRRESSTVW-SESNAIIEG 155

Query: 135 MRRASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENS 194
           M +A  Y+P+EK+ +IE+Y++KRN RNFNK+IKYECRKTLADSR RIRGRFARN+E    
Sbjct: 156 MSKAYKYSPEEKKEKIEKYRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFARNDEISQQ 215

Query: 195 NSTSSPVETWSCYDNAMAEDDASWTTFLDSYSLN 200
                          A+  D  +W +FLDS+S N
Sbjct: 216 EQVD--------VMEAVVGDVDTWASFLDSFSAN 237

[Close]

BLAST of Csor.00g192840 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.7e-13
Identity = 57/161 (35.40%), Postives = 85/161 (52.80%), Query Frame = 0


Query: 36  PMVEALEVSYSGSSSGGCSYSSYGSPTSHPGLSHGPTSRRPLTRAYSSGHNERGGEERAW 95
           PM+++  +SY+  SS   ++ S                   + R YS+G  +   E +  
Sbjct: 149 PMMDSSNLSYNNLSSPENAFFS-----------------SQMRRVYSTGDLQNNMEMQRS 208

Query: 96  SSESSLII--EGMRRASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADSRKRIR 155
           S  S++    E   +   Y+ +E++ +I +Y+ KRNQRNF K IKY CRKTLADSR RIR
Sbjct: 209 SENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIR 268

Query: 156 GRFARNEE-AENSNSTSSPVETWSCYDNAMAEDDASWTTFL 194
           GRFARN+E  E  N      E W   D    +++AS ++F+
Sbjct: 269 GRFARNDEVVEIPNIEDDDSELWK-LDGLHEKEEASVSSFV 291

[Close]

BLAST of Csor.00g192840 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.0e-12
Identity = 38/81 (46.91%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 106 MRRASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENS 165
           + +    +P++++ +I RY  KRN+RNFNKKIKY CRKTLADSR R+RGRFA+N+E    
Sbjct: 300 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEP 359

Query: 166 NSTSSPVETWSCYDNAMAEDD 187
           N      + +S + +   EDD
Sbjct: 360 NR-----QAFSSHHDDEDEDD 375

[Close]

BLAST of Csor.00g192840 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.0e-12
Identity = 38/81 (46.91%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 106 MRRASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEAENS 165
           + +    +P++++ +I RY  KRN+RNFNKKIKY CRKTLADSR R+RGRFA+N+E    
Sbjct: 299 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEP 358

Query: 166 NSTSSPVETWSCYDNAMAEDD 187
           N      + +S + +   EDD
Sbjct: 359 NR-----QAFSSHHDDEDEDD 374

[Close]

BLAST of Csor.00g192840 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 69.3 bits (168), Expect = 4.0e-12
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 0


Query: 90  GEERAWSSESSLIIEGMRRASPYTPQEKRHRIERYKTKRNQRNFNKKIKYECRKTLADSR 149
           GE+   +SE  +  E   +   Y+ +E++ RI RY  K+NQRNFNK IKY CRKTLAD R
Sbjct: 112 GEQSWGNSEGGIQAEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRR 171

Query: 150 KRIRGRFARNEE 162
            R+RGRFARN +
Sbjct: 172 VRVRGRFARNND 183

The following BLAST results are available for this feature:

BLAST of Csor.00g192840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940T9	2.7e-05	45.16	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]

BLAST of Csor.00g192840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607222.1	6.14e-140	100.00	Zinc finger protein CONSTANS-LIKE 4, partial [Cucurbita argyrosperma subsp. soro...	[more]
KAG7036907.1	3.55e-139	99.50	Zinc finger protein CONSTANS-LIKE 4, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022949263.1	3.56e-134	97.52	zinc finger protein CONSTANS-LIKE 4-like [Cucurbita moschata]	[more]
XP_022998187.1	7.18e-134	97.03	zinc finger protein CONSTANS-LIKE 4-like [Cucurbita maxima]	[more]
XP_023524572.1	1.20e-106	96.39	uncharacterized protein LOC111788469 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g192840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBJ0	1.72e-134	97.52	zinc finger protein CONSTANS-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1K781	3.48e-134	97.03	zinc finger protein CONSTANS-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1I3X3	3.51e-61	57.69	zinc finger protein CONSTANS-LIKE 5-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1HLZ0	1.93e-58	57.26	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1DVX1	1.15e-56	55.74	uncharacterized protein LOC111023585 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Csor.00g192840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59990.1	1.5e-22	39.72	CCT motif family protein	[more]
AT5G41380.1	4.7e-13	35.40	CCT motif family protein	[more]
AT2G33350.1	3.0e-12	46.91	CCT motif family protein	[more]
AT2G33350.2	3.0e-12	46.91	CCT motif family protein	[more]
AT3G12890.1	4.0e-12	52.78	activator of spomin::LUC2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 118..159 e-value: 5.5E-17 score: 61.6
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 117..159 score: 14.743135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..80
None	No IPR available	PANTHER	PTHR31319:SF73	CCT MOTIF FAMILY PROTEIN	coord: 75..197
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 75..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g192840.m01	Csor.00g192840.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding