Csor.00g191780 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g191780
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	BTB/POZ domain-containing protein
Location	Csor_Chr01: 8919385 .. 8919735 (+)
RNA-Seq Expression	Csor.00g191780
Synteny	Csor.00g191780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCGCCGGCAGTGCGTGAGAGCCATTTCGGACACAGAGAGTGAGTCCGATCACGAAACGATGAAGTGCTTATCGTGTCTGGAGGATTACCGGTCACGCGACGCCGGAACCTGCAAGGAGTGCTACGATGAAGCCAATGAGACTGAGGAAGAACTCAAGCGTGAGATTGAAGACTTGAAAGCGAAGGTCGCTTTCCTCAGGTTTTGGTCCCCTCTTGGTCATCTTCACAGTAGGTCGAATGCACCTTGCTTTACGAATGTCGTTTTGATCGCCACCGGGGATGGGTCCGAGGGATACTCTGCGCCCCTTCCGGCTCATAAAGCTGTCTTGGTTAGTACGATTTTTTAA

mRNA sequence

ATGAATCGCCGGCAGTGCGTGAGAGCCATTTCGGACACAGAGAGTGAGTCCGATCACGAAACGATGAAGTGCTTATCGTGTCTGGAGGATTACCGGTCACGCGACGCCGGAACCTGCAAGGAGTGCTACGATGAAGCCAATGAGACTGAGGAAGAACTCAAGCGTGAGATTGAAGACTTGAAAGCGAAGGTCGCTTTCCTCAGGTTTTGGTCCCCTCTTGGTCATCTTCACAGTAGGTCGAATGCACCTTGCTTTACGAATGTCGTTTTGATCGCCACCGGGGATGGGTCCGAGGGATACTCTGCGCCCCTTCCGGCTCATAAAGCTGTCTTGGTTAGTACGATTTTTTAA

Coding sequence (CDS)

ATGAATCGCCGGCAGTGCGTGAGAGCCATTTCGGACACAGAGAGTGAGTCCGATCACGAAACGATGAAGTGCTTATCGTGTCTGGAGGATTACCGGTCACGCGACGCCGGAACCTGCAAGGAGTGCTACGATGAAGCCAATGAGACTGAGGAAGAACTCAAGCGTGAGATTGAAGACTTGAAAGCGAAGGTCGCTTTCCTCAGGTTTTGGTCCCCTCTTGGTCATCTTCACAGTAGGTCGAATGCACCTTGCTTTACGAATGTCGTTTTGATCGCCACCGGGGATGGGTCCGAGGGATACTCTGCGCCCCTTCCGGCTCATAAAGCTGTCTTGGTTAGTACGATTTTTTAA

Protein sequence

MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDLKAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVSTIF

Homology

[Close]

BLAST of Csor.00g191780 vs. ExPASy Swiss-Prot
Match: Q6DBN1 (BTB/POZ domain-containing protein At4g08455 OS=Arabidopsis thaliana OX=3702 GN=At4g08455 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-23
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 22  MKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDLKAKVAFLRFWSPLGHLHSRSN 81
           M+C+SC E+Y  R+AGTCKECY EA ETEEELKREI+DLKAKVAFLR  S L H  + S 
Sbjct: 1   MRCISCREEYLPRNAGTCKECYVEAGETEEELKREIDDLKAKVAFLRLSSSLDH-GTSST 60

Query: 82  APCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 114
           +  FT+VVLIA+ D +   S P+PAHK+VLVS
Sbjct: 61  SRSFTDVVLIASEDNAG--SPPIPAHKSVLVS 89

[Close]

BLAST of Csor.00g191780 vs. NCBI nr
Match: KAG6607711.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240 bits (612), Expect = 6.33e-80
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60
           MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL
Sbjct: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60

Query: 61  KAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVSTIF 116
           KAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVSTIF
Sbjct: 61  KAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVSTIF 116

[Close]

BLAST of Csor.00g191780 vs. NCBI nr
Match: KAG7037284.1 (BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (585), Expect = 1.10e-73
Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60
           MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL
Sbjct: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60

Query: 61  KAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 113
           KAKVAFLRFWSPL HLHSRSNAPCFT+VVLIATGDGSEGYSAPLPAHKAVLVS
Sbjct: 61  KAKVAFLRFWSPLDHLHSRSNAPCFTDVVLIATGDGSEGYSAPLPAHKAVLVS 113

[Close]

BLAST of Csor.00g191780 vs. NCBI nr
Match: XP_022940620.1 (BTB/POZ domain-containing protein At4g08455-like [Cucurbita moschata])

HSP 1 Score: 228 bits (580), Expect = 6.33e-73
Identity = 110/113 (97.35%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60
           MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL
Sbjct: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60

Query: 61  KAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 113
           KAKVAFLRFWSPL HLHSRSNAPCFT+VVLIATGDG EGYSAPLPAHKAVLVS
Sbjct: 61  KAKVAFLRFWSPLDHLHSRSNAPCFTDVVLIATGDGPEGYSAPLPAHKAVLVS 113

[Close]

BLAST of Csor.00g191780 vs. NCBI nr
Match: XP_023525145.1 (BTB/POZ domain-containing protein At4g08455-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227 bits (579), Expect = 9.56e-73
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60
           MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL
Sbjct: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60

Query: 61  KAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 113
           KAKVAFLRFWSPL HLHSRSNAPCFT++VLIATGDG EGYSAPLPAHKAVLVS
Sbjct: 61  KAKVAFLRFWSPLDHLHSRSNAPCFTDIVLIATGDGPEGYSAPLPAHKAVLVS 113

[Close]

BLAST of Csor.00g191780 vs. NCBI nr
Match: XP_022981580.1 (BTB/POZ domain-containing protein At4g08455-like [Cucurbita maxima])

HSP 1 Score: 223 bits (567), Expect = 5.96e-71
Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60
           MNRRQCVRAISDTESESD ETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL
Sbjct: 1   MNRRQCVRAISDTESESDQETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60

Query: 61  KAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 113
           KAKVAFLRFWSPL HLHSRSNAPCFT++VLIATGDG EGYS PLPAHKAVLVS
Sbjct: 61  KAKVAFLRFWSPLDHLHSRSNAPCFTDIVLIATGDGPEGYSVPLPAHKAVLVS 113

[Close]

BLAST of Csor.00g191780 vs. ExPASy TrEMBL
Match: A0A6J1FR49 (BTB/POZ domain-containing protein At4g08455-like OS=Cucurbita moschata OX=3662 GN=LOC111446158 PE=4 SV=1)

HSP 1 Score: 228 bits (580), Expect = 3.06e-73
Identity = 110/113 (97.35%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60
           MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL
Sbjct: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60

Query: 61  KAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 113
           KAKVAFLRFWSPL HLHSRSNAPCFT+VVLIATGDG EGYSAPLPAHKAVLVS
Sbjct: 61  KAKVAFLRFWSPLDHLHSRSNAPCFTDVVLIATGDGPEGYSAPLPAHKAVLVS 113

[Close]

BLAST of Csor.00g191780 vs. ExPASy TrEMBL
Match: A0A6J1IZW7 (BTB/POZ domain-containing protein At4g08455-like OS=Cucurbita maxima OX=3661 GN=LOC111480656 PE=4 SV=1)

HSP 1 Score: 223 bits (567), Expect = 2.88e-71
Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 1   MNRRQCVRAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60
           MNRRQCVRAISDTESESD ETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL
Sbjct: 1   MNRRQCVRAISDTESESDQETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDL 60

Query: 61  KAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 113
           KAKVAFLRFWSPL HLHSRSNAPCFT++VLIATGDG EGYS PLPAHKAVLVS
Sbjct: 61  KAKVAFLRFWSPLDHLHSRSNAPCFTDIVLIATGDGPEGYSVPLPAHKAVLVS 113

[Close]

BLAST of Csor.00g191780 vs. ExPASy TrEMBL
Match: A0A6J1F7E6 (BTB/POZ domain-containing protein At4g08455 OS=Cucurbita moschata OX=3662 GN=LOC111443043 PE=4 SV=1)

HSP 1 Score: 206 bits (524), Expect = 1.02e-64
Identity = 100/115 (86.96%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MNRRQCV--RAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIE 60
           M+RR+CV  RAISD ESESD+E MKCLSCLEDYRSRDAGTCKECY+EANETEEELKREIE
Sbjct: 1   MHRRRCVSSRAISDAESESDNEMMKCLSCLEDYRSRDAGTCKECYEEANETEEELKREIE 60

Query: 61  DLKAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 113
           DLKAKVAFLRFWSPL HLH+RSNAPCFT+VVLIA+GDG+EGY+ PLPAHKAVLVS
Sbjct: 61  DLKAKVAFLRFWSPLDHLHNRSNAPCFTDVVLIASGDGAEGYAVPLPAHKAVLVS 115

[Close]

BLAST of Csor.00g191780 vs. ExPASy TrEMBL
Match: A0A6J1CDJ9 (BTB/POZ domain-containing protein At4g08455 OS=Momordica charantia OX=3673 GN=LOC111010480 PE=4 SV=1)

HSP 1 Score: 206 bits (523), Expect = 1.45e-64
Identity = 99/115 (86.09%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MNRRQCV--RAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIE 60
           M+RR+CV  RA+SDTESESDH+ MKCLSCLEDYRSRDAGTCKECY+EANETEEELKREIE
Sbjct: 1   MHRRRCVSSRAVSDTESESDHDVMKCLSCLEDYRSRDAGTCKECYEEANETEEELKREIE 60

Query: 61  DLKAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 113
           DLKAKVAFLRFWSPL HLH+RSNAPCFT+VVLIA+GDG E Y+ PLPAHKAVLVS
Sbjct: 61  DLKAKVAFLRFWSPLDHLHNRSNAPCFTDVVLIASGDGPERYAVPLPAHKAVLVS 115

[Close]

BLAST of Csor.00g191780 vs. ExPASy TrEMBL
Match: A0A6J1ILT3 (BTB/POZ domain-containing protein At4g08455-like OS=Cucurbita maxima OX=3661 GN=LOC111476767 PE=4 SV=1)

HSP 1 Score: 201 bits (511), Expect = 9.58e-63
Identity = 97/115 (84.35%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MNRRQCV--RAISDTESESDHETMKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIE 60
           M+R +C+  RAISD ESESD++ MKCLSCLEDYRSRDAGTCKECY+EANETEEELKREIE
Sbjct: 1   MHRSRCLSSRAISDAESESDNKMMKCLSCLEDYRSRDAGTCKECYEEANETEEELKREIE 60

Query: 61  DLKAKVAFLRFWSPLGHLHSRSNAPCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 113
           DLKAKVAFLRFWSPL HLH+RSNAPCFT+VVLIA+GDG+EGY+ PLPAHKAVLVS
Sbjct: 61  DLKAKVAFLRFWSPLDHLHNRSNAPCFTDVVLIASGDGAEGYAVPLPAHKAVLVS 115

[Close]

BLAST of Csor.00g191780 vs. TAIR 10
Match: AT4G08455.1 (BTB/POZ domain-containing protein )

HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24
Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 22  MKCLSCLEDYRSRDAGTCKECYDEANETEEELKREIEDLKAKVAFLRFWSPLGHLHSRSN 81
           M+C+SC E+Y  R+AGTCKECY EA ETEEELKREI+DLKAKVAFLR  S L H  + S 
Sbjct: 1   MRCISCREEYLPRNAGTCKECYVEAGETEEELKREIDDLKAKVAFLRLSSSLDH-GTSST 60

Query: 82  APCFTNVVLIATGDGSEGYSAPLPAHKAVLVS 114
           +  FT+VVLIA+ D +   S P+PAHK+VLVS
Sbjct: 61  SRSFTDVVLIASEDNAG--SPPIPAHKSVLVS 89

The following BLAST results are available for this feature:

BLAST of Csor.00g191780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DBN1	2.1e-23	64.13	BTB/POZ domain-containing protein At4g08455 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]

BLAST of Csor.00g191780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607711.1	6.33e-80	100.00	BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7037284.1	1.10e-73	98.23	BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022940620.1	6.33e-73	97.35	BTB/POZ domain-containing protein At4g08455-like [Cucurbita moschata]	[more]
XP_023525145.1	9.56e-73	96.46	BTB/POZ domain-containing protein At4g08455-like isoform X2 [Cucurbita pepo subs...	[more]
XP_022981580.1	5.96e-71	94.69	BTB/POZ domain-containing protein At4g08455-like [Cucurbita maxima]	[more]

BLAST of Csor.00g191780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FR49	3.06e-73	97.35	BTB/POZ domain-containing protein At4g08455-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1IZW7	2.88e-71	94.69	BTB/POZ domain-containing protein At4g08455-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1F7E6	1.02e-64	86.96	BTB/POZ domain-containing protein At4g08455 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1CDJ9	1.45e-64	86.09	BTB/POZ domain-containing protein At4g08455 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1ILT3	9.58e-63	84.35	BTB/POZ domain-containing protein At4g08455-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Csor.00g191780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08455.1	1.5e-24	64.13	BTB/POZ domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g191780.m01	Csor.00g191780.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination