Csor.00g191680 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g191680
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	KH domain-containing protein
Location	Csor_Chr01: 9005429 .. 9014721 (-)
RNA-Seq Expression	Csor.00g191680
Synteny	Csor.00g191680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTATCCATATCCACACACCTCTCTGGAGGGAGAGGAGGGAGAGAAATGGCGTCGTCTGCAGGCGGGATGTACATGTCTTTCTCTCTCTCCCCTTCGGCTCCTCACTCTCCTCATCTTCCTGCTCTTCGCTCTCCATCTTCTGCATCTGCTGCTGCTCTACTCGAGCAAGAAAAGTAACCGATCCACTCTTTTTTTCTTGTTTTTTTGGCTTTTTTTTGGCTCTTTGTGTTGTTGCTTTGTGAGATCTGTGATTTGTGTTTATTTATCTTTGTTTTTTTTGGATCAGTATGGTTTTGTTTTTGAGTCTTCGTTGATTTGTACAATCGGTGTGTTAGTCACCTGATTCACGTACTAGCTACTGAGTTCTTAAACTGTTTGGACTTAGTTTATACTTGTTCCATGTGCTTCTTGTTTGATTGTCTGATTGATGTTAGATCTGAGCTTATTACACCGTCTTTTGATTTTGGGATTATGTTTCTTTTTATTCATTGTTGAAGTTTTCAACTCTCTTTAGTTGCTTAACATCCATATCGTCTAGAGATCTTTTTTTTTTTCTTGTGGCATAATCGTATTATGACAGGCCATTTAACTGATTATATTTTAATTTTTACTCTATTTTTCTTTTTCTTTTGCAGGTATCTCTCCGAGTTGTTGGAAGAGCGGCATAAACTAAATCCGTTTATGTCTGTGCTCCCTAATAGTTGTCGATTGCTGAACCAAGGTGAACTTCATAGCCTTATCGAAGTAACTCTTGAGAAATAGTTTGCTTCCATCGTTGTTTTTCATTTGGTTGATGTGCTGGAGATCTTGGGGATGAGGCATTATTGCCCAATTAAAATCAGAACAGAACATATAAGCATGACTGAACTAATCTAACTGAAACTAAATGCAACGAATGTGATGAGAAACTATCTGATCTAACTTTAATGGTTATGCTTGCCTGTCGCTTTGCCTTTCTGCTAATACCTTGGATATTTACTTGGCAGGGACCTGAAGTGAGTAAATGGCTGTGTATAAAACCTTTTGTGTGTGTGTGTGGACACAATAACTTGATAGTTGATAGCACTAAACTAAAGTGACTACAATCAAAATTGGACACTTCTTCCATTAAAAAAAATGAGGATAGAGTTTTCCCCTATCTCTAATATTGACCAACCATCCCCATTAGGTTACAAAAAAAAAAAAAAAAAAAAAAAAAATTCATGTTACATTGGTTGTCTGTCTTATATCTTATAGATCGGTCTAGAAGCATATGAGTTTAGATGCAAGCTCACATGTAAATGTTCTAGCTGTTCGGTACTGAGTCTAATTTTTATCGGTGCAAGTCCCTTTCCTTGGCATCATTGAGAACCGATCCTTGTATTTTTAGCTTTCCCATTGCGTTTATACCTCTGTATCTTTCTTTCTACACTTGTCTGTTAACTCCTTGTATTAACAAGTATAAATTTGTCTGTAACTTGATGGAAATTATAATATACTAATTAATTCTAATAATTTATTGCAAGTTATTTGATTTCTTCTACCTTTGCTGCCTTTTGTCTACTTTATTTTTTGAGTTTCTGTGGCGTATGCAGCTTATGAACTTCCTTTCTCAAGCATTTGGTGGCAATATTAATATTTCATATTGATATTGCTCTATAGTATTGGGGTTCAAGTAATTTTTTTTTTTTTCTTTTGAACATTAAATTTCTTTATGAAAGATATATTTCACTGGCCCAGAAGTGAAAAACACCATGTTGTGTGTCCATTATGTGGTAACTACTAACTTTTTAACAAATGCGCTGACTGGTACATCTTGTTCTTGAAAATTGACATTTTTGGAGCAGAAATATTGCGTGTAACCACACTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAATATTCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATGAATGGATGGCCATCACGGTTTCAATCAGAAGTACGGATACTAACCATTAACATAACCTTACTGCCCATCTAATTTACTGTACATAAGAAGCATTGCTGACACAAACTTCTACATTTTTTTGCTAACTAGTGACAAGGGTCTAATATTCTAATATAGAGTGCTGACTCGTTAGTTAACTTTTGTTTATCTCTTGTCTATCTTGGTGAAGGGACTTTTCAAGAAACTTTACCTCTTTGCACACATGGAATTTTGAAATACATAAATAAGTGGCCCCAAGAGTAATTTATGTCAGATTTAGCGCATTCATATGGTTGTCCAAGAGTGTGTCTTCATTAAGTGAAAAAAAAAAAAAAAAAAAGTAGAGGAAAAGAAAAGAAAAGAAATATGCTACTTCAAGATCCACGACAACATTTGAATGGTTCTGGGATTCCTAGTATTCCCTTAAGCAACCTAAACATTATCATACTTTCTATGCATGATTATAATGTTCTCTCTCAAGGTATGCAGTGTTTTCAGTACTCTGCAGTTTCTCCCTGGATTGTTGTACTAGAATCTATGACTGATATATATTGTTTCTGAAAATATCCCATGTTCTTTACACCAAAGTTATGTTGGCTGTTAAACATATCTTGTGTAGGATGATTGCCTTCATGTTAATTTTCTGGTATGAACTCTATATGATGTTGTGTATGTAGATGTCAGGTTTATTGCAACCCTCATCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCGTCAAGTCTTATTGTGAAGAGAACCATCAGAGTAGACGTTCCTGTTGACAACTACCCTAATGTATGAATTAGCATTGTGTTTTGTGCCTTGTCTTTTTGTATGTTTCTTGATGAAATCTAATTGAACCTTTTTTTTTTTTTTTTTTGGATAGTATAACTTTGTCGGCCGCCTCCTTGGACCTAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACCGATTGTCGAGTTTTGATTAGAGGACGAGGTAGCATTAAGGATCCAGTTAAGGTAATTTACTATAAATTTTCATTTTCATGTTATGTTTTTTGTCATGTTTTGGTTGTTAATCTATTCTATTATGCAGGGAAAAATTAGAAATTCTATGTCTAAAGTTTTAAGATGGTCACACTTTAGTCTTCGAACTTTTAATCGGATCAATTACACCCTCATTAAGAATGGTTGCAATGTCACTTTTCCATTTAAATAAATCAAATAACTTTTTTCACTATTTCTTTTAAGATTATTATTTTTACGGTGAAAATGTGTAGAAATCAGGCAAAGATGGAGAGAATTGTTGCAACCTAACTCCTATCTTTAAGTTTGGTAACCTTTCCATGAATTCTTTTTTAATAAACACGAAATGGAGGAAGGGAGAGATAGATACTCCACCCGTTTCTCCCCAGTTCTGTCTCTTGTATAACTTCTTCCCCCTATTTTTTATTTTCCCTGTCAATTCTCTTTGCCTCTCATGCCCCTATTCTCCCTTTTTTTTAACTTTATCTTCTTATTTATAAGACCCCCCATTTACCTCTCCTATTTCTTTAAACTTGTTGTATTTATTTGTTTTTGATAAATCACAAGAGACAGTTTAATATTTAATAGAACTATTTGTTAATGAAATGACAATCTTTTTCATTTTTACTTCATTAAATCTCAATTTCAATTAATTCTTTCAAATTAATTTGGACATTTTTTGTATTTGAGTTGTAGCAAATCTTATTTTATTATTTTTATTCTTGTCTCAAACCAATGATTTAAAGTTCTATGTCATACCTGCCTCTAGTATTGAGGAATAGAAACCTCATTTGACTTGTTCTTTGTACGTGACAAAGAACTTCATGATGAAATTTTGTTTTCATGATGTGGAAATTGAGTAGCTTAGATCATAATGGTTTATATATATATTTATATATAATTTTTATGTTTTCTTTAGGATGAGAGCATATTGAACTACTATGGGTTGGCCTAGTTTCACTAAGGGTCGTGTAAATAATAAAGGGCTTAGAGGAAATGAGTTCAAGTCATAGTAGCCACCCTCCTACGATTTAATATTCTATGACCTTGGTAACCAAATGTAGTAGGTTTAGTCGATTGTTTTGTGAGAAGGGTTAAGGTGTGTGAAAGCGAGCCTGAACACTCACAATTTTTTTTAAAAAAATAATTAGATTATATTGATTGAAAGAATAGAATGTGAATATGGATAAGTTTTAAGAGATATTTTTGGTTGAAATGGAGAAATGAGTGAATATGGACAAGTCTTAAGAGAACAATGGAAGCATTTGATTTCACTAGGGTTATCAATTTTTTGTTTACTATTATTATTACTACATTGAATAAGACCTGACAATACAAAAGTGGCGAACAAAAAAGAGCCCGACAATGAATCATTAAATTTACACAAGACTAAATCTCTTCCCAAGACTTCTCCACATGATTTGATTTTAGAAATCAATTTGCAGAAAGATCGATGTAGTAAATTATGTTGGTTATATCATGGACAAGTAACATTCACTGAAGGTGTTTTTTCATAAGAAGAAAATTTCACTATCATATGAAGTTTACCAAAGAAGGGTCAAGGATACCTATTGCACTGATGTTTAGTGTAAGAACCGTTTCAACATGATTAACAGGAAGTACAAGAATGAGAAGGCCAGGGTTCAGGTTCCCATGGGGGGTTTTTCTTGTCTTGGTCGTCTTGATGAATTGACTGAACCTTCTGTGTCCATGAAGAAACCCTCCTCTCCTCCCAGGGCTCTTCCTTTGCTTTTTTTGGAAGATACCTCCCCCTGGGGCTGTCATTGCGATGTCTAAAAAAAACTTGTGGTGGCAATGGACAAGGTTATTTTTGGAGGGATTACTTGGATATGGCAGCTAGAGCTGCAACAATAGCGCTGATGGAGGAAGATGAAGAGGAGACAGTGAGCAAAAAAAGACGTTAGGGGAAGGGATGGGTAGGTTGACAAGAGCAATTAAAAGGTTTTGGGAGGTGTATGAAAGAGTGGAGGTCGAGAAGATGCGGCAAATGGTGGAATTGGAGAAGCAAAGAATGCAATTTTCCAAGGAATTGGAGGTGCAATATATGCACACTTTTATGAGGACTCAGGTTCAGCTTAAGAGGATTCGGCGTGGAAAGAAGTTAACTCCCAATGATATCTAGTGGCAGTCGTGTGAAGGGAATAACAGGAATTTACATAAGAAGGGAGAGATTCCAATCCAAAGAGAGTTACAATAAACATCTCCAATTAGACAATAATGTAAAAAAGCTATAAGAATTGAAAGGTGTATGCATGATAAAGCTAGGAAGGTAATATATTAAAAAAAAAAAAAAACTATCAACAGATCTTTCCTTGTCATTGAAAATTCTCAAAAAAACTACATCTGTAGGACTTCTTTTCTCTGTTGTGGAAGGATGACCTGACAAAGTTCGACAAAGAATACTTTCGGGATCCTTTGGAAGGACCGTCAACCAATTGGAAACAAGAGTCTCTGCTTCCAAAATCTGCAGCAAAGAAACAAGAGAAGGTTATGTGTTCTTGGGATCCAGCTTCCTTTCCTTATAGCAAAAGGAACAGCAATGTGGAGACAAAAAATGCATTGAGTCATTTCGCATTGCAATTAATCAAAAAGTGTCGATAGCCTTGTGACTTAATCAAAGGTTTTCTTTTCTACCTGGGAAGTGGGTGACAAAAATGATATGGTATAAGATCGTGAGGGAAAAAGCTATATACATTTAAAACTTCAGAGAAGAAAGATGGTATAGACCAGGGAAAAGAATGCAAAGGCCAAAGTGGTTAGTCTTGCCTCAATTGTAAAATTTTAACAACCTAGAAAAACAGGATGAGAACAATACATAAAGCATTAGGTTCCAAAGGGAATTGTTGAAGCCATTTTGTCAACAAGGCTGTATACTTGTTTTATATAGAAATCAAGCTTTCATCGAGAAAAATGAAAAAATACAAAGGACTTCCAATAAAGCAGTCGAAGGAAAGGAGCCCAACTGAAAAAGGGGCTCTAATCTAACAAAATGAGACTTAAAGGATGATCACAAAATTCTTATGCACCCATGCTCGACGAAAAACATGAAACCTCACAAGAGACAAAACTTCCTCCCACAATCTTTCAAATTCCCCTATTCTTCCCTTCAAGCTATAGGCCCCAAAGAATAGCATAAACACCTGCAATTCACAACAAAATATCCTTTCTCATGAAAGGAGGAGTGAAGAGCAACTCCTCAACCATAGAAAAACGTCTGGACTGAACCCAAAATACACCACACGTTTGGGAAAAGAATAATGGAAGACCAACTAGGCAAATTGGAAACTCCCAATAATGTGATCAATATCCTATACCCAACCCACCTAATTCAATCAGTTTTGAGATGCCTCCCACTAATCATATGAATAACCCTCCCTCATTCACACCCTCCCCTTCTATCGAAATTCCCCCATGATCTTCTCCAACCTATTATTGAAAGTGGAATGAATCTTAAAAAGAGAGCAAAACAGAAGTATTTTGAACTCTCACTCAATATAGACTCGATAGAAATTTCCTTCTAGGTCATGGATGAATGCCCTTTTTTTAAGAGATTTTGTTAACCCTTTCTACACTTTAGTTTCATGAAGACGAACAATTGGTGTTATGACTAAGGACTAAAGTAGTGGGAAGACCCTACTTGTCCATCTGGCCAACTAGGACTTGATGGTGGCTGTTTATTATTTCATTTTCTAGTAATTTAAAACCCATTACCGTTGAATTTTTTTTTTAAATCTTTTGGAAAGAAATAGAGATGGAGGCTTCCATCAAAGTTCAATTACTCTTCGCTTCAAAACTTGGGAATTCGGGAATTTGGTAAGCTTAGAAGAAAAGAAGTATGACTTGGTTGCTGTATCATGTAGTGTGTTTGAGAATTTCCCTTGGAACAAAATGGGAAATTCAATCTAGTACCTGTTGCTTGATCCCCTAGTCACTTATTGTCATGTGTAGGAACTCAACTGCTGCTTGAGATATTTTTCATTTTGCTCATACCCGCATTATGTTGGAACAATTGACCGAAGTCACCATGTAATCTTGTGACCTTTCCCAAATGTTATATTCAGGTTATTTAGAGAGGAAAGATGGGGCACATATTCTTTTAACTTCCCTTCCTCAAGTTATTTTGCTCCGTTTGTTCTAGATCAGTGTGCCTCTTATTGAACCCATTTGTTCTAAAATCAATTTTTTTCTTGTATTAAATTGGGCGGACGGTCTAATGTCGCTTGGGTCAATGCTATCAAAATTTTGTTTAAGAATTTGGTTTGAAAGGAATTTTAAAGAGAAGTGAGAGACGAAGGTTCTAGATCTTGCTTATTCATTCTTAGCATCTACTAGGAGCTTATTGTTTTTTAATTCTTTCAAAATGTTATTCTAAAGCCATATACTTTTTTGTATTATTCACGTTTTTATGACTATTGGGAGCTTTGTGATTGGTGTGGGTATGGGTGGTTTCCATATTTAACCTCCCATTCTGTGAGTTATCTTTATGAATTGATGCTAATTGTTATGAATCAACCACAAAATAGTTTAAATTTTGATTGAGTGGGGAAAACATTGTCTCTTTGCTTCACTCTCTCGCTCTCTATTCTTGCATGCTGACTTGGAGAACTTCAGAAGGATTCTTATATGTAGCACAGTCACGTCAGTTCTTGTCTTCAAGGGATATGAAATATCTTTGTTTAATCTTCTTCAGGCATAAATTGTATATATATAGTATGTATTGATGCTTTTTTTTTTTTCTTTCTAAAATTTTTAAGCAGCTTATACGATTCTTTTTCACCCTTATGCCTGGGAGTCTACATTTATTCTGTAATGTTAAAATATCAGAATCAAAATTCAGTATCTGATGAAGGTACCAAGTTTATTCCATTGTTTATGTCCTGTAGGAAGAAATGCTGAGAGGAAAACCAGGTTACGAGCATTTGAATGAGCCTCTCCACATTCTAGTTGAGGCAGAATTGCCAGTTGAAATTATTGATGCTCGCCTTATGCAGGCCCACGAGATTCTCGAGGACTTGCTCAAACCAATAGTGAGTATCTTATGAGATCTTGTACATCTCGTTTTTGAGTATGGTGTCTCATTTCTTCTTACCGATATCATTTCCTTTTTTTTTTTATTCTCTTCCTATTAAAATTATTTATCTAGGATGAATCTCACGACTTCTACAAGAAGCAACAGCTACGAGAGCTAGCTTTGCTCAATGGCACACTTCGTGAGGAGGGTTCACCTATGTCTAGTTCTGTGTCTCCCTTCCACAATAGCCTCGGAATGAAGAGAGCGAAAACTAGGGGGTAAATGGAAATGCTTTTGGAAATCGTTTTCTAGTGTTGCCTGGGGAGTAATCAGCAGTCCCATTCCAAGGTGTTGCCTGCAGCCAATGCCTCCAACTGCAATCGGGGCACTCGCACTCTTACGTGCAGGTTCTTGCTAAAATTTATATGGTGTGTTTATGTAATATTTGGAAGAGAAGGTAATGTAATGACATGAAAATGTCAGGCAGTTTAAGGATTACTAGTGACTGGGGAGGGGCTTGCTTCTACATATATTGCTTTAGCTGTTAATGTGTGCTATTTACTAGGCTTTTTCGTTATAAGGTTATGATGGGAGTTCTGATATTATGTAGGATGGTGCGTTCTTTTGGGACTTGCAAAAGAAGGGTTAAGAATTGTAAGGGAATGTTGATTTATTAAGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTCTTTTGGGAGTGTTTTTGTACTAGGAAGAGTAGAAATCTTCCCCTTCCCCCCCGGGGGGAAAAACATTCTTTATTATTTCTTTCTTATATGATCTAGAGATTCAAAAGCTTTAATATCGTACTATTATTAATTTCATTCTACTTCAAAATTCTTGCTTGAGCTGCAGTTTTGTATTATGGGATACTACAAGGTTGTATCTTTTAACTAATCTTCTATGTTAGTAGTTTTGAAAGTTCTTGAAATTTGCTTTTAGGGTGGATGTTTTCGCAGTAACAATCAGGAACTTGGATTTATTGAGTTATGTTTAGATTGAAGATAATTTGTTCATAGGTCAAACCAGACTGTCGGCTTGAAGATGCTGCTACTCGAATGCCATTTTCATGCCAAGGTTTGAATGATTGAATCTTTGTGATTGAATTTCAAGTATTCTATGTAATGAAAATTGGACATACTCATATCTAGGCTGACCAGGGGGATATAACATGTATTGGACAAGCTGTATGTGAATGGGACAGTAAGGGGTGTAAATTGATGTTATACTCTAAGCTTGCATTGCAAAGATCATAG

mRNA sequence

ATGGCAGTATCCATATCCACACACCTCTCTGGAGGGAGAGGAGGGAGAGAAATGGCGTCGTCTGCAGGCGGGATGTACATGTCTTTCTCTCTCTCCCCTTCGGCTCCTCACTCTCCTCATCTTCCTGCTCTTCGCTCTCCATCTTCTGCATCTGCTGCTGCTCTACTCGAGCAAGAAAAGTATCTCTCCGAGTTGTTGGAAGAGCGGCATAAACTAAATCCGTTTATGTCTGTGCTCCCTAATAGTTGTCGATTGCTGAACCAAGAAATATTGCGTGTAACCACACTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAATATTCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATGAATGGATGGCCATCACGGTTTCAATCAGAAATGTCAGGTTTATTGCAACCCTCATCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCGTCAAGTCTTATTGTGAAGAGAACCATCAGAGTAGACGTTCCTGTTGACAACTACCCTAATTATAACTTTGTCGGCCGCCTCCTTGGACCTAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACCGATTGTCGAGTTTTGATTAGAGGACGAGGTAGCATTAAGGATCCAGTTAAGGAAGAAATGCTGAGAGGAAAACCAGGTTACGAGCATTTGAATGAGCCTCTCCACATTCTAGTTGAGGCAGAATTGCCAGTTGAAATTATTGATGCTCGCCTTATGCAGGCCCACGAGATTCTCGAGGACTTGCTCAAACCAATAGATGAATCTCACGACTTCTACAAGAAGCAACAGCTACGAGAGCTAGCTTTGCTCAATGGCACACTTCGTGAGGAGGGTTCACCTATGTCTAGTTCTGTGTCTCCCTTCCACAATAGCCTCGGAATGAAGAGAGCGAAAACTAGGGGGTCAAACCAGACTGTCGGCTTGAAGATGCTGCTACTCGAATGCCATTTTCATGCCAAGGCTGACCAGGGGGATATAACATGTATTGGACAAGCTGTATGTGAATGGGACAGTAAGGGGTGTAAATTGATGTTATACTCTAAGCTTGCATTGCAAAGATCATAG

Coding sequence (CDS)

ATGGCAGTATCCATATCCACACACCTCTCTGGAGGGAGAGGAGGGAGAGAAATGGCGTCGTCTGCAGGCGGGATGTACATGTCTTTCTCTCTCTCCCCTTCGGCTCCTCACTCTCCTCATCTTCCTGCTCTTCGCTCTCCATCTTCTGCATCTGCTGCTGCTCTACTCGAGCAAGAAAAGTATCTCTCCGAGTTGTTGGAAGAGCGGCATAAACTAAATCCGTTTATGTCTGTGCTCCCTAATAGTTGTCGATTGCTGAACCAAGAAATATTGCGTGTAACCACACTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAATATTCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATGAATGGATGGCCATCACGGTTTCAATCAGAAATGTCAGGTTTATTGCAACCCTCATCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCGTCAAGTCTTATTGTGAAGAGAACCATCAGAGTAGACGTTCCTGTTGACAACTACCCTAATTATAACTTTGTCGGCCGCCTCCTTGGACCTAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACCGATTGTCGAGTTTTGATTAGAGGACGAGGTAGCATTAAGGATCCAGTTAAGGAAGAAATGCTGAGAGGAAAACCAGGTTACGAGCATTTGAATGAGCCTCTCCACATTCTAGTTGAGGCAGAATTGCCAGTTGAAATTATTGATGCTCGCCTTATGCAGGCCCACGAGATTCTCGAGGACTTGCTCAAACCAATAGATGAATCTCACGACTTCTACAAGAAGCAACAGCTACGAGAGCTAGCTTTGCTCAATGGCACACTTCGTGAGGAGGGTTCACCTATGTCTAGTTCTGTGTCTCCCTTCCACAATAGCCTCGGAATGAAGAGAGCGAAAACTAGGGGGTCAAACCAGACTGTCGGCTTGAAGATGCTGCTACTCGAATGCCATTTTCATGCCAAGGCTGACCAGGGGGATATAACATGTATTGGACAAGCTGTATGTGAATGGGACAGTAAGGGGTGTAAATTGATGTTATACTCTAAGCTTGCATTGCAAAGATCATAG

Protein sequence

MAVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRGSNQTVGLKMLLLECHFHAKADQGDITCIGQAVCEWDSKGCKLMLYSKLALQRS

Homology

[Close]

BLAST of Csor.00g191680 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.5e-115
Identity = 226/307 (73.62%), Postives = 252/307 (82.08%), Query Frame = 0


Query: 11  GGRGGREMASSAGGMYMSFSLS----PSAPHSPHLP-ALRSPSSASAAALLEQEKYLSEL 70
           GG  G  +    GG +M++S S    PSAP SP+    LRS SS      +EQEKYLSEL
Sbjct: 14  GGGSGGGIGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSS----VFVEQEKYLSEL 73

Query: 71  LEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGA 130
           L ERHKL PF+ VLP++ RLLNQEILRVTTLL  A+VL QSGL++ SPLASGGIF N  A
Sbjct: 74  LAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARA 133

Query: 131 DMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLL 190
           DMNGW S+F SE S  +  S   NWL+S GSSS LI KRTIRVD+PVDNYPN+NFVGRLL
Sbjct: 134 DMNGWASQFPSERS--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLL 193

Query: 191 GPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEI 250
           GPRGNSLKRVEASTDCRVLIRGRGSIKDP+KEEM+RGKPGYEHLNEPLHILVEAELP+EI
Sbjct: 194 GPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEI 253

Query: 251 IDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLG 310
           +DARLMQA EIL+DLL P++E+HD YKKQQLRELALLNGTLREEGSPMS SVSP+ NSLG
Sbjct: 254 VDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLG 313

Query: 311 MKRAKTR 313
           MKRAKTR
Sbjct: 314 MKRAKTR 313

[Close]

BLAST of Csor.00g191680 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 1.1e-113
Identity = 226/318 (71.07%), Postives = 255/318 (80.19%), Query Frame = 0


Query: 1   MAVSISTHLSGGRGGREMASSAGGMYMSF----SLSPSAPHSPHLP-ALRSPSSASAAAL 60
           M  S+     GG GG     S GG ++++    S+ PSAP SP+    LRS  S     L
Sbjct: 3   MMTSLGGGAGGGGGG---GGSGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPS----FL 62

Query: 61  LEQEKYLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLA 120
           +EQEKYLSELL ERHKL PF+ VLP+ CRL+NQEILRVTTLL  A  L QS  ++ SPLA
Sbjct: 63  VEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA--LSQSRFDHPSPLA 122

Query: 121 SGGIFSNGGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNY 180
           SGGIF N  ADMNGW S+F SE S  +  S A NWL+S GSSS LIVKRTIRVD+PVD Y
Sbjct: 123 SGGIFQNSRADMNGWASQFPSERS--VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKY 182

Query: 181 PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHI 240
           PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP+KE+M+RGKPGYEHLNEPLHI
Sbjct: 183 PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHI 242

Query: 241 LVEAELPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSS 300
           LVEAELP+EI+DARLMQA EIL+DLL P++E+HDFYKKQQLRELALLNG+LREEGSPMS 
Sbjct: 243 LVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSG 302

Query: 301 SVSPFHNSLGMKRAKTRG 314
           S+SP+ NSLGMKRAKTRG
Sbjct: 303 SISPY-NSLGMKRAKTRG 308

[Close]

BLAST of Csor.00g191680 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.3e-71
Identity = 156/291 (53.61%), Postives = 191/291 (65.64%), Query Frame = 0


Query: 24  GMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMSVLPNSC 83
           G+Y   + SPS   SP    +R+PSS          +Y+S+LL E  KL PFM VLP   
Sbjct: 3   GLYNYNNFSPSRAASPQ---IRTPSSD------VDSQYISQLLAEHQKLGPFMQVLPICS 62

Query: 84  RLLNQEILRVTTLLGKASVLGQSGLEY--SSPLASGGIFSN-GGADMNGWPSRFQSEMSG 143
           RLLNQEI R+T ++          L +   SP+AS  + SN  G  + GW       + G
Sbjct: 63  RLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGG 122

Query: 144 LLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTD 203
                 A  W  +  S SS  VKR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA+T 
Sbjct: 123 --PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTG 182

Query: 204 CRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDL 263
           CRV IRG+GSIKDP KEE L+GKPGYEHLNE LHIL+EA+LP++I+D +L QA EI+E+L
Sbjct: 183 CRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEEL 242

Query: 264 LKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKT 312
           +KP+DES D+ K+QQLRELALLN  LRE     S SVSPF NS  MKR KT
Sbjct: 243 VKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 281

[Close]

BLAST of Csor.00g191680 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.3e-70
Identity = 145/255 (56.86%), Postives = 182/255 (71.37%), Query Frame = 0


Query: 60  KYLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASV--LGQSGLEYSSPLASG 119
           +YL+ELL E  KL PFM VLP   +LL+QEI+RV++++         +      SP++S 
Sbjct: 29  QYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDFDRHRFRSPSPMSSP 88

Query: 120 GIFSN-GGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYP 179
              SN  G   + W    Q  +       ++ +W  +  S SS +VK+ +R+DVPVD+YP
Sbjct: 89  NPRSNRSGNGFSPWNGLHQERLG--FPQGTSMDWQGAPPSPSSHVVKKILRLDVPVDSYP 148

Query: 180 NYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHIL 239
           N+NFVGR+LGPRGNSLKRVEAST CRV IRG+GSIKDP KE+ LRGKPGYEHL++PLHIL
Sbjct: 149 NFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGKPGYEHLSDPLHIL 208

Query: 240 VEAELPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSS 299
           +EAE P  IIDARL  A E++E+LLKP+DES DFYK+QQLRELA+LN TLRE+ SP   S
Sbjct: 209 IEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAMLNSTLRED-SPHPGS 268

Query: 300 VSPFHNSLGMKRAKT 312
           VSPF N  GMKRAKT
Sbjct: 269 VSPFSNG-GMKRAKT 279

[Close]

BLAST of Csor.00g191680 vs. ExPASy Swiss-Prot
Match: Q8GWR3 (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702 GN=At1g09660/At1g09670 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 5.6e-70
Identity = 158/302 (52.32%), Postives = 198/302 (65.56%), Query Frame = 0


Query: 18  MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS 77
           M S AG + M   +SP +     L   R+  + S     ++E+YL+ELL+ER KL PF+ 
Sbjct: 2   MESGAGFVAMEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQ 61

Query: 78  VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE 137
           V+PN CRLLN EI RV      +S       E+ SP  S G  +NG  D+ GW S  Q+E
Sbjct: 62  VMPNCCRLLNHEIRRV------SSFPDLDRYEHGSPFRSLGQPTNGKLDLEGW-SMMQAE 121

Query: 138 MSGLLQPS------SAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNS 197
            +  LQ +      S   W+   G  +  IVK+ IR+DVPVD YP+YNFVGR+LGPRGNS
Sbjct: 122 ENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNS 181

Query: 198 LKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLM 257
           LKRVE +T CRV IRGRGS+KD VKEE L+GKPGYEHL EPLH+L+EAELP +II++RL 
Sbjct: 182 LKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLE 241

Query: 258 QAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEG-SP-MSSSVSPFHNSLGMKRA 312
            A   LE LLKP+DES D YK++QL+ELA LNGTLREE  SP +S  +SP  +    KRA
Sbjct: 242 HAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNSKRA 296

[Close]

BLAST of Csor.00g191680 vs. NCBI nr
Match: KAG6607721.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 709 bits (1830), Expect = 2.68e-257
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0


Query: 1   MAVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEK 60
           MAVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEK
Sbjct: 1   MAVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEK 60

Query: 61  YLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIF 120
           YLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIF
Sbjct: 61  YLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIF 120

Query: 121 SNGGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNF 180
           SNGGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNF
Sbjct: 121 SNGGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNF 180

Query: 181 VGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAE 240
           VGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAE
Sbjct: 181 VGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAE 240

Query: 241 LPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPF 300
           LPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPF
Sbjct: 241 LPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPF 300

Query: 301 HNSLGMKRAKTRGSNQTVGLKMLLLECHFHAKADQGDITCIGQAVCEWDSKGCKLMLYSK 360
           HNSLGMKRAKTRGSNQTVGLKMLLLECHFHAKADQGDITCIGQAVCEWDSKGCKLMLYSK
Sbjct: 301 HNSLGMKRAKTRGSNQTVGLKMLLLECHFHAKADQGDITCIGQAVCEWDSKGCKLMLYSK 360

Query: 361 LALQRS 366
           LALQRS
Sbjct: 361 LALQRS 366

[Close]

BLAST of Csor.00g191680 vs. NCBI nr
Match: XP_022981699.1 (KH domain-containing protein At4g26480-like [Cucurbita maxima])

HSP 1 Score: 596 bits (1537), Expect = 5.40e-213
Identity = 310/313 (99.04%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MAVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEK 60
           +AVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEK
Sbjct: 33  LAVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEK 92

Query: 61  YLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIF 120
           YLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIF
Sbjct: 93  YLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIF 152

Query: 121 SNGGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNF 180
           SNGGAD+NGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVD+YPNYNF
Sbjct: 153 SNGGADLNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDSYPNYNF 212

Query: 181 VGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAE 240
           VGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAE
Sbjct: 213 VGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAE 272

Query: 241 LPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPF 300
           LPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPF
Sbjct: 273 LPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPF 332

Query: 301 HNSLGMKRAKTRG 313
           HNSLGMKRAKTRG
Sbjct: 333 HNSLGMKRAKTRG 345

[Close]

BLAST of Csor.00g191680 vs. NCBI nr
Match: XP_022940633.1 (KH domain-containing protein At5g56140-like isoform X1 [Cucurbita moschata] >XP_023524463.1 KH domain-containing protein At5g56140-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570 bits (1469), Expect = 2.01e-203
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 18  MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS 77
           MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS
Sbjct: 1   MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS 60

Query: 78  VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE 137
           VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE
Sbjct: 61  VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE 120

Query: 138 MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 197
           MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 180

Query: 198 STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 257
           STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL
Sbjct: 181 STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 240

Query: 258 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 313
           EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]

BLAST of Csor.00g191680 vs. NCBI nr
Match: XP_022139476.1 (KH domain-containing protein At5g56140-like isoform X1 [Momordica charantia])

HSP 1 Score: 539 bits (1389), Expect = 4.13e-191
Identity = 279/299 (93.31%), Postives = 289/299 (96.66%), Query Frame = 0


Query: 15  GREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNP 74
           GREM SSAGGMYM+FS SPSAPHSPHLP LRSPSSASAAALLEQEKYLSELL ER KL+P
Sbjct: 6   GREMTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSP 65

Query: 75  FMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRF 134
           FM VLPNS RLL+QEILRVTTLLGKASVLGQSGLE++SPLASGGIFSNGGADMNGWPSRF
Sbjct: 66  FMPVLPNSYRLLSQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMNGWPSRF 125

Query: 135 QSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKR 194
           QSEMSGLLQPSSAQNWLSSQGSSS LIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKR
Sbjct: 126 QSEMSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKR 185

Query: 195 VEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAH 254
           VEASTDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARL+QA 
Sbjct: 186 VEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLLQAK 245

Query: 255 EILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 313
           EIL+DLLKPIDESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 246 EILQDLLKPIDESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 304

[Close]

BLAST of Csor.00g191680 vs. NCBI nr
Match: XP_038897899.1 (KH domain-containing protein At5g56140 isoform X1 [Benincasa hispida])

HSP 1 Score: 529 bits (1363), Expect = 2.80e-187
Identity = 274/296 (92.57%), Postives = 285/296 (96.28%), Query Frame = 0


Query: 18  MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS 77
           M SSAGGMYM+FS SPSAPHSPHLP LRSPSSASAAALLEQEKYLSELL ER KL+PFM 
Sbjct: 1   MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSPFMP 60

Query: 78  VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE 137
           VLPNS RLLNQEILRVTTLLGKASVLGQSGLE++SPLASGGIFSNGGADM+ WPSRFQSE
Sbjct: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120

Query: 138 MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 197
           MSGLLQPSSAQNWLSSQGSSS LIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 198 STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 257
           STDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARLMQA EIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 258 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 313
           EDLLKP++ESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]

BLAST of Csor.00g191680 vs. ExPASy TrEMBL
Match: A0A6J1J2K6 (KH domain-containing protein At4g26480-like OS=Cucurbita maxima OX=3661 GN=LOC111480763 PE=4 SV=1)

HSP 1 Score: 596 bits (1537), Expect = 2.62e-213
Identity = 310/313 (99.04%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MAVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEK 60
           +AVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEK
Sbjct: 33  LAVSISTHLSGGRGGREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEK 92

Query: 61  YLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIF 120
           YLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIF
Sbjct: 93  YLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIF 152

Query: 121 SNGGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNF 180
           SNGGAD+NGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVD+YPNYNF
Sbjct: 153 SNGGADLNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDSYPNYNF 212

Query: 181 VGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAE 240
           VGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAE
Sbjct: 213 VGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAE 272

Query: 241 LPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPF 300
           LPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPF
Sbjct: 273 LPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPF 332

Query: 301 HNSLGMKRAKTRG 313
           HNSLGMKRAKTRG
Sbjct: 333 HNSLGMKRAKTRG 345

[Close]

BLAST of Csor.00g191680 vs. ExPASy TrEMBL
Match: A0A6J1FPU7 (KH domain-containing protein At5g56140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446170 PE=4 SV=1)

HSP 1 Score: 570 bits (1469), Expect = 9.73e-204
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 18  MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS 77
           MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS
Sbjct: 1   MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS 60

Query: 78  VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE 137
           VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE
Sbjct: 61  VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE 120

Query: 138 MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 197
           MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 180

Query: 198 STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 257
           STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL
Sbjct: 181 STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 240

Query: 258 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 313
           EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]

BLAST of Csor.00g191680 vs. ExPASy TrEMBL
Match: A0A6J1CCS9 (KH domain-containing protein At5g56140-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010397 PE=4 SV=1)

HSP 1 Score: 539 bits (1389), Expect = 2.00e-191
Identity = 279/299 (93.31%), Postives = 289/299 (96.66%), Query Frame = 0


Query: 15  GREMASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNP 74
           GREM SSAGGMYM+FS SPSAPHSPHLP LRSPSSASAAALLEQEKYLSELL ER KL+P
Sbjct: 6   GREMTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSASAAALLEQEKYLSELLAERQKLSP 65

Query: 75  FMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRF 134
           FM VLPNS RLL+QEILRVTTLLGKASVLGQSGLE++SPLASGGIFSNGGADMNGWPSRF
Sbjct: 66  FMPVLPNSYRLLSQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMNGWPSRF 125

Query: 135 QSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKR 194
           QSEMSGLLQPSSAQNWLSSQGSSS LIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKR
Sbjct: 126 QSEMSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKR 185

Query: 195 VEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAH 254
           VEASTDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARL+QA 
Sbjct: 186 VEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLLQAK 245

Query: 255 EILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 313
           EIL+DLLKPIDESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 246 EILQDLLKPIDESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 304

[Close]

BLAST of Csor.00g191680 vs. ExPASy TrEMBL
Match: A0A0A0K3M6 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G188690 PE=4 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 3.53e-183
Identity = 268/296 (90.54%), Postives = 282/296 (95.27%), Query Frame = 0


Query: 18  MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS 77
           M SSA GMYM+FS SPSAPHSPHLP LRSPSSASAAA+LEQEKYLSELL ER KL+PFM 
Sbjct: 1   MTSSAAGMYMAFSPSPSAPHSPHLPGLRSPSSASAAAILEQEKYLSELLAERQKLSPFMP 60

Query: 78  VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE 137
           VLPNS RLLNQEILRVTTLLGKASVLGQSGLE++SPLASGGIFSNGGADM+ WPSRFQSE
Sbjct: 61  VLPNSYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGIFSNGGADMSAWPSRFQSE 120

Query: 138 MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 197
           MSGLLQ SSAQNWL+SQGSSS LIVKRTIRVDVPV+ +PNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLTSQGSSSGLIVKRTIRVDVPVETFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 198 STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 257
           STDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARLMQA EIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 258 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 313
           EDLLKP++ESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]

BLAST of Csor.00g191680 vs. ExPASy TrEMBL
Match: A0A6J1IMS3 (KH domain-containing protein At5g56140-like OS=Cucurbita maxima OX=3661 GN=LOC111476978 PE=4 SV=1)

HSP 1 Score: 516 bits (1329), Expect = 2.36e-182
Identity = 271/300 (90.33%), Postives = 281/300 (93.67%), Query Frame = 0


Query: 18  MASSAGGMYMSFSLSPSAPHSPHLPALRSPSS----ASAAALLEQEKYLSELLEERHKLN 77
           M SSAGGMYM+FS SPSAPHSPHLP LRSPSS    A+AAALLEQEKYLSELL ER KL 
Sbjct: 1   MTSSAGGMYMAFSPSPSAPHSPHLPGLRSPSSVSAAAAAAALLEQEKYLSELLAERQKLG 60

Query: 78  PFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSR 137
           PF+ VLP S RLLNQEILRVTTLLGKASVLGQSGLE++SPLASGG+FSNGGADMNGWPSR
Sbjct: 61  PFLPVLPISYRLLNQEILRVTTLLGKASVLGQSGLEHASPLASGGMFSNGGADMNGWPSR 120

Query: 138 FQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLK 197
           FQSEMS LLQ S AQNWLSSQGSSS LIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLK
Sbjct: 121 FQSEMSSLLQSSPAQNWLSSQGSSSGLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLK 180

Query: 198 RVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQA 257
           RVEASTDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARLMQA
Sbjct: 181 RVEASTDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQA 240

Query: 258 HEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 313
            EILEDLLKP+DESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 REILEDLLKPMDESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 300

[Close]

BLAST of Csor.00g191680 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 417.5 bits (1072), Expect = 1.1e-116
Identity = 226/307 (73.62%), Postives = 252/307 (82.08%), Query Frame = 0


Query: 11  GGRGGREMASSAGGMYMSFSLS----PSAPHSPHLP-ALRSPSSASAAALLEQEKYLSEL 70
           GG  G  +    GG +M++S S    PSAP SP+    LRS SS      +EQEKYLSEL
Sbjct: 14  GGGSGGGIGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSS----VFVEQEKYLSEL 73

Query: 71  LEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGA 130
           L ERHKL PF+ VLP++ RLLNQEILRVTTLL  A+VL QSGL++ SPLASGGIF N  A
Sbjct: 74  LAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARA 133

Query: 131 DMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLL 190
           DMNGW S+F SE S  +  S   NWL+S GSSS LI KRTIRVD+PVDNYPN+NFVGRLL
Sbjct: 134 DMNGWASQFPSERS--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLL 193

Query: 191 GPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEI 250
           GPRGNSLKRVEASTDCRVLIRGRGSIKDP+KEEM+RGKPGYEHLNEPLHILVEAELP+EI
Sbjct: 194 GPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEI 253

Query: 251 IDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLG 310
           +DARLMQA EIL+DLL P++E+HD YKKQQLRELALLNGTLREEGSPMS SVSP+ NSLG
Sbjct: 254 VDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLG 313

Query: 311 MKRAKTR 313
           MKRAKTR
Sbjct: 314 MKRAKTR 313

[Close]

BLAST of Csor.00g191680 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 411.4 bits (1056), Expect = 7.7e-115
Identity = 226/318 (71.07%), Postives = 255/318 (80.19%), Query Frame = 0


Query: 1   MAVSISTHLSGGRGGREMASSAGGMYMSF----SLSPSAPHSPHLP-ALRSPSSASAAAL 60
           M  S+     GG GG     S GG ++++    S+ PSAP SP+    LRS  S     L
Sbjct: 3   MMTSLGGGAGGGGGG---GGSGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPS----FL 62

Query: 61  LEQEKYLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLA 120
           +EQEKYLSELL ERHKL PF+ VLP+ CRL+NQEILRVTTLL  A  L QS  ++ SPLA
Sbjct: 63  VEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA--LSQSRFDHPSPLA 122

Query: 121 SGGIFSNGGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNY 180
           SGGIF N  ADMNGW S+F SE S  +  S A NWL+S GSSS LIVKRTIRVD+PVD Y
Sbjct: 123 SGGIFQNSRADMNGWASQFPSERS--VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKY 182

Query: 181 PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHI 240
           PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDP+KE+M+RGKPGYEHLNEPLHI
Sbjct: 183 PNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHI 242

Query: 241 LVEAELPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSS 300
           LVEAELP+EI+DARLMQA EIL+DLL P++E+HDFYKKQQLRELALLNG+LREEGSPMS 
Sbjct: 243 LVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSG 302

Query: 301 SVSPFHNSLGMKRAKTRG 314
           S+SP+ NSLGMKRAKTRG
Sbjct: 303 SISPY-NSLGMKRAKTRG 308

[Close]

BLAST of Csor.00g191680 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 270.8 bits (691), Expect = 1.6e-72
Identity = 156/291 (53.61%), Postives = 191/291 (65.64%), Query Frame = 0


Query: 24  GMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMSVLPNSC 83
           G+Y   + SPS   SP    +R+PSS          +Y+S+LL E  KL PFM VLP   
Sbjct: 3   GLYNYNNFSPSRAASPQ---IRTPSSD------VDSQYISQLLAEHQKLGPFMQVLPICS 62

Query: 84  RLLNQEILRVTTLLGKASVLGQSGLEY--SSPLASGGIFSN-GGADMNGWPSRFQSEMSG 143
           RLLNQEI R+T ++          L +   SP+AS  + SN  G  + GW       + G
Sbjct: 63  RLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGG 122

Query: 144 LLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTD 203
                 A  W  +  S SS  VKR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA+T 
Sbjct: 123 --PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTG 182

Query: 204 CRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDL 263
           CRV IRG+GSIKDP KEE L+GKPGYEHLNE LHIL+EA+LP++I+D +L QA EI+E+L
Sbjct: 183 CRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEEL 242

Query: 264 LKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKT 312
           +KP+DES D+ K+QQLRELALLN  LRE     S SVSPF NS  MKR KT
Sbjct: 243 VKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 281

[Close]

BLAST of Csor.00g191680 vs. TAIR 10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 266.2 bits (679), Expect = 4.0e-71
Identity = 158/302 (52.32%), Postives = 198/302 (65.56%), Query Frame = 0


Query: 18  MASSAGGMYMSFSLSPSAPHSPHLPALRSPSSASAAALLEQEKYLSELLEERHKLNPFMS 77
           M S AG + M   +SP +     L   R+  + S     ++E+YL+ELL+ER KL PF+ 
Sbjct: 2   MESGAGFVAMEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQ 61

Query: 78  VLPNSCRLLNQEILRVTTLLGKASVLGQSGLEYSSPLASGGIFSNGGADMNGWPSRFQSE 137
           V+PN CRLLN EI RV      +S       E+ SP  S G  +NG  D+ GW S  Q+E
Sbjct: 62  VMPNCCRLLNHEIRRV------SSFPDLDRYEHGSPFRSLGQPTNGKLDLEGW-SMMQAE 121

Query: 138 MSGLLQPS------SAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNS 197
            +  LQ +      S   W+   G  +  IVK+ IR+DVPVD YP+YNFVGR+LGPRGNS
Sbjct: 122 ENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNS 181

Query: 198 LKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLM 257
           LKRVE +T CRV IRGRGS+KD VKEE L+GKPGYEHL EPLH+L+EAELP +II++RL 
Sbjct: 182 LKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLE 241

Query: 258 QAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEG-SP-MSSSVSPFHNSLGMKRA 312
            A   LE LLKP+DES D YK++QL+ELA LNGTLREE  SP +S  +SP  +    KRA
Sbjct: 242 HAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNSKRA 296

[Close]

BLAST of Csor.00g191680 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-70
Identity = 149/276 (53.99%), Postives = 185/276 (67.03%), Query Frame = 0


Query: 42  PALRSPSSASAAALLEQEKYLSELLEERHKLNPFMSVLPNSCRLLNQEILRVTTLLGKAS 101
           PA  +     +   ++  +YL+ELL E  KL PFM VLP   RLLNQE+ RV+ ++    
Sbjct: 13  PARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQG 72

Query: 102 VLGQSGLEY--SSPLASGGIFSN-GGADMNGWPSRFQSEMSGLLQPSSAQNWLSSQGSSS 161
                 L +   SP+AS  + SN     + GW    Q  +SG   P    +W  + GS S
Sbjct: 73  FGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSG--TPGMTMDWQGAPGSPS 132

Query: 162 SLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEE 221
           S  VKR +R+++PVDNYPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KE+
Sbjct: 133 SYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKED 192

Query: 222 MLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRE 281
            LRG+PGYEHLNE LHIL+EA+LP  I++ RL QA EI+E+LLKP+DES DF K+QQLRE
Sbjct: 193 KLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRE 252

Query: 282 LALLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT 312
           LALLN   LREE  G     SVSPF++S   KR KT
Sbjct: 253 LALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284

The following BLAST results are available for this feature:

BLAST of Csor.00g191680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKT4	1.5e-115	73.62	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]
Q0WLR1	1.1e-113	71.07	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q8GYR4	2.3e-71	53.61	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q75GR5	3.3e-70	56.86	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q8GWR3	5.6e-70	52.32	KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Csor.00g191680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607721.1	2.68e-257	100.00	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022981699.1	5.40e-213	99.04	KH domain-containing protein At4g26480-like [Cucurbita maxima]	[more]
XP_022940633.1	2.01e-203	100.00	KH domain-containing protein At5g56140-like isoform X1 [Cucurbita moschata] >XP_...	[more]
XP_022139476.1	4.13e-191	93.31	KH domain-containing protein At5g56140-like isoform X1 [Momordica charantia]	[more]
XP_038897899.1	2.80e-187	92.57	KH domain-containing protein At5g56140 isoform X1 [Benincasa hispida]	[more]

BLAST of Csor.00g191680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2K6	2.62e-213	99.04	KH domain-containing protein At4g26480-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FPU7	9.73e-204	100.00	KH domain-containing protein At5g56140-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1CCS9	2.00e-191	93.31	KH domain-containing protein At5g56140-like isoform X1 OS=Momordica charantia OX...	[more]
A0A0A0K3M6	3.53e-183	90.54	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G188690 PE=4 SV=...	[more]
A0A6J1IMS3	2.36e-182	90.33	KH domain-containing protein At5g56140-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Csor.00g191680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56140.1	1.1e-116	73.62	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	7.7e-115	71.07	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	1.6e-72	53.61	RNA-binding KH domain-containing protein	[more]
AT1G09660.1	4.0e-71	52.32	RNA-binding KH domain-containing protein	[more]
AT2G38610.1	2.0e-70	53.99	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 162..255 e-value: 1.2E-5 score: 34.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 54..293 e-value: 1.2E-67 score: 229.9
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 167..287
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 60..94 e-value: 1.7E-6 score: 27.6
None	No IPR available	PANTHER	PTHR11208:SF104	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 23..313
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 165..287 e-value: 4.69077E-57 score: 180.132
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 23..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g191680.m01	Csor.00g191680.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding