Csor.00g191650 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g191650
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr01: 9052891 .. 9054911 (-)
RNA-Seq Expression	Csor.00g191650
Synteny	Csor.00g191650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAGATGATTGGTCAAGCAGGCTTATCTGATTGGGCCGGTAAATGGGCCGACAATCCATTTCCTGGGTCAGCTGTTTCTGGGATGCTGTTGTGGACTACTTAATTTATTTGTATAATTTAAAAAAAAAAAATAATACAACAATATAAATAGGTTAATCCAAATATAATTTTTCATATGTTATCGGTGGAAATAAAATTTAAAAACTCAATATGTGTGGTTTACTTAATATTATAAATAAATAAATAAATAACAATTTTATTCTTCAATAATTAACAAAAATGATTGCGCATCCGGGGAATCGAACCCCGGTCAGTACCGTGGGAGGGTACTATGATACCACTACACTAGATGCGCTAGATGTTTTTTATGTTAAACTATATTATATAATATTGTTTTCTTTCGTAAAACACAAAAAATTCCGTTGCCGGGAATCGAACCCGGGTCTCCTGGGTGAAAGCCAGATATCCTAACCGCTGGACGACAACGGAGCTTATGAATAAAAACACATAATTAAAATAAATATACATTACAAAAAGTTAGCTGATTTTGTTTGGTACTAAATCCCATCTATTCTTTTTAATAATCTAATACGAAATGTAAGTATTTTGGTATCGATTCAAAATTGAAATAAATTCAAATTCAAACATATCGGTGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGTCAAAACATAAGCAATAATTTAACATGAAACGTATTTTAAATTATAAAAATTACATCCGTGGAGTTACGTCAAAATAGTTTATAAAATTACTTAAGTTTCGAGAAAGTGGTATTTAAAAATAATATTAAAATGACAAAGAGGAAAACTAACTCGATTTAACGGTCCTCCTAGTAGCGACACGGCTCCGCACACTCCCTCTAGCAACAGTGGTCTATATTCTACCTCCAAATAAATAATAGAATAACTGAAATAAGTATAAAAATACTCAGTAAGCACCTACTTGTAGACTCTCATTTAAACTTCTCATGTTCAATGTTTCTTAAGTTATGTGCTAAATTTGGATCCTAGAGTCAAGCCAATTCTATGGCTCAGAGTTCATTTCTAGCATTCTAAAATTCTCAAAGTTCATAATTATGTACTTTACTACGACTCTTGTAATTAATTAAGCAAATAAATAATAATTAAAAAAAAATAGCAACCCTTCTGCATTGAGGAGGGAAAGGAAGGACACGTAGACGCTAACACGATGCTTTATGTGAGAGGAGCCAAGTCATCCGCCTTTTATAGTTACAACTTAGAATTTTTTTTCGATTTATTTTAAAACTTCAAGTTGTTACACTACACGAGAGTCCCTTCGCAAACAACTGACTAAAAGGACAATAAAAAAAGTACACAATCCCTCGAGTCTAAACTCAATTCACATATAAACAGATGTAAGAATAGATGAATTCCACCCATGAAGTCAATTTCGATAATATAAACGATCACGGATCATCAACCAAGTTGTAAAGGATGTGACCCAAAAATCAGTACAGTGAATGTCCTAGATCGACAAGACAACCAGATGAGCAAAGGATAAAATCCCTAAAAACTCAACAAACATACACGCGCAACCCAGATAAGATAAAACTAAGACCATAACATATAGAAAACTACCCACGTCACTAACAACCCTATCCCAGCTTGAAAAACTATAGTGCCCTAATAGCTGAGGGTCTAATAAAATAAAGCACGTGCGTCCATCGCTAATAGAGAATTGAATCAACACTCAAAAACACTTTCACACTTTCAGAGTCGTACAATCGAATGATTGATCAAGCAGGCTTATCTGATTGGGCTGCAAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTGCTAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTGCCAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTGCTAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTTCTGGAATGCTGCTATGA

mRNA sequence

ATGGAACAGATGATTGGTCAAGCAGGCTTATCTGATTGGGCCGAGTCGTACAATCGAATGATTGATCAAGCAGGCTTATCTGATTGGGCTGCAAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTGCTAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTGCCAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTGCTAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTTCTGGAATGCTGCTATGA

Coding sequence (CDS)

ATGGAACAGATGATTGGTCAAGCAGGCTTATCTGATTGGGCCGAGTCGTACAATCGAATGATTGATCAAGCAGGCTTATCTGATTGGGCTGCAAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTGCTAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTGCCAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTGCTAAATGGGCCGACAATCCATCTACTGGGCCAGCTGTTTCTGGAATGCTGCTATGA

Protein sequence

MEQMIGQAGLSDWAESYNRMIDQAGLSDWAAKWADNPSTGPAVAKWADNPSTGPAVAKWADNPSTGPAVAKWADNPSTGPAVSGMLL

Homology

[Close]

BLAST of Csor.00g191650 vs. NCBI nr
Match: KAG6607724.1 (hypothetical protein SDJN03_01066, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182 bits (461), Expect = 8.30e-58
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MEQMIGQAGLSDWAESYNRMIDQAGLSDWAAKWADNPSTGPAVAKWADNPSTGPAVAKWA 60
          MEQMIGQAGLSDWAESYNRMIDQAGLSDWAAKWADNPSTGPAVAKWADNPSTGPAVAKWA
Sbjct: 1  MEQMIGQAGLSDWAESYNRMIDQAGLSDWAAKWADNPSTGPAVAKWADNPSTGPAVAKWA 60

Query: 61 DNPSTGPAVAKWADNPSTGPAVSGMLL 87
          DNPSTGPAVAKWADNPSTGPAVSGMLL
Sbjct: 61 DNPSTGPAVAKWADNPSTGPAVSGMLL 87

[Close]

BLAST of Csor.00g191650 vs. NCBI nr
Match: WP_073227727.1 (protein kinase [Streptomyces sp. NBRC 110465])

HSP 1 Score: 52.8 bits (125), Expect = 1.60e-05
Identity = 25/48 (52.08%), Postives = 25/48 (52.08%), Query Frame = 0


Query: 33  WADNPSTGPAVAKWADNPSTGPAVAKWADNPSTGPAVAKWADNPSTGP 80
           WAD   TGP    WAD   TGP    WAD   TGPA   WAD   TGP
Sbjct: 388 WADEEKTGPVRDPWADGHETGPVGGPWADGEETGPARDPWADGGETGP 435

The following BLAST results are available for this feature:

BLAST of Csor.00g191650 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g191650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607724.1	8.30e-58	100.00	hypothetical protein SDJN03_01066, partial [Cucurbita argyrosperma subsp. sorori...	[more]
WP_073227727.1	1.60e-05	52.08	protein kinase [Streptomyces sp. NBRC 110465]	[more]

BLAST of Csor.00g191650 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Csor.00g191650 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g191650.m01	Csor.00g191650.m01	mRNA