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Csor.00g189570 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTCAGGGAGAGGATTGTCTTCTTGGGGAACAGCATCGATGATTTTGTGGCTGATGCTATTATCAGTCAGCTTTTGCTCTTGGATGCGCAGGACTCTACTAAAGATATCAGACTTTTCATTAATTCCTCTGGCGGCTCTCTCAGGTATTCACGAGATGATTTTTTGTGCACAATGTAGTTGGTGAAGTATGGAATATGAAATTCGGGCTCATTTCTGTTCTTTCCAAACGATTTAGGTAATTTTATTTCTAGGAATATGCGATTTATGCCTAATTTCATATGCTTTCCTTACCGCGCTGAATGCAAGAGTTAGCCTACATTACTTGATCTCTGCCTCTCGCAATTTCTATATTGTTTTCTTCATCTGCATCACAAGCTTTAGCCTACGAATGGGGGCATTCATTCCAGTGATGAGTCGGGTCACTGAAAATTTAGGACTCGTTGTAGATCAATGAAATTGGAATGGAAAATTATTTTTAATATATAGCGATACTCATGTTATGCACCTGCTATCAATAGAAATGCTTATGAATGATGAAAGTTATATAAACATCCAACATGGAAATTGTTTGTACATAAAAAAAATTAAATTAGAAAGAACCGTGCAAGAGTGTTAGTCTACCTTGTTACGTGGAACTTTGCTGGTCCTCTTATTTCTTTGGTGGCTTGAGAATTTGAAATGTAAGGACTAGAAACACCGCCTTCCTCTCAAAGTGGATGCTTGCGTGAAGAGAAACCCCTTAGAAGAGGCTTAATCAAGTAAATATGCGATTGGCAATCTTTGGTGGAACTTTAGGTTCTAGAGTTGACATTGATAAAATATGAGATTTCTTTTATCAGTGTCCTTTTAAAGAATGGCAATGGTCGTAGGACATTAATGAAATCTGCCAATTTCCAGCTGAATAGTAAAGAAGGCTGGTTAGATAAACCCTTTTTTCTTTGGTTTGGGGAGGAGAAGTCTCGGTTCTTCCTTTGGGATATGGCATACAAGAGCCTAAACACTTGTGACATGACTTACAAGAACCTTCCATGGCTTTATCTCCTTCGCTTACCCTGCATATCTAATGAAGAAATATTGGACTATCTTTTTACTCAATTAGCAACATGTTGCACAAAAGGTTTAGATGTGATTCTATGATGAACCCCATTTTTTCTTTTTTTCTTTTCTTTTTGGATAGGAATCAATTTCACGGACCTAATGAAATGATACAAATAGGTAAACCATCCAAAGAGATTGCAACAGATTTCTGGAGTTGGATGAGAGAATTTAAGAGGTAGCTATTAAAAGGAACCATATTTTTACACCAACAAAGAGCTATATGAAACAATAGGCTTCTAGGACTTTTAAGTGTAGAGTTTCTTTGTCTAAAAAATCCTCGAGTTCAATCCATTCCAAATCTTCCAAATAACCGGCCTCACAATGAATGACCAAATGATATTCTCTGTCGACTTGATGGATGATCCATCAGATGCAAATTTAGCCAATCAAGAGTTTCAAGGACTAATTTCCTAAATCAGTACTCCTTTGAGATAGGCGCTAACACTCCTCCTAAGTGATTAAGCATGTTGGCCAAATCGAAATTCTTTCCTACAATTAAACATCCCGGTTTCTTGTTCTTCTTTGACATTCTCAGTGGCAGATGATAAAAAATAGAGGTGGTGGAAGTTGAAGATACCAAAGGTTCCCTAACTACTAAAGTATTGTAGTGATTCTTCTATTGTCGTCTCTCCCCTTTCCTTTGTGGCATCTTTTGAATGACATGCTAGGGTCTTGATAGAGGTTAAGTGTATTAACCCACTGAATTCAGAATATACGTTTTCAAAACATCTACATATTATTATTCTGTTTGTATCAAGTTTTACTTTGCTCTGGATAACTCTTGGTTTCTTCATTTAATGTGTTTATATCTAGAGACAAGTGTATTCATCTACTCGACTTTTCTACATGAATGGGACGGGCCTTTATGTACATTAGGAAATCTTCTAGAGTAATTTAACTTAGAATTCTGTGGCTTATGAATGACCTTTTCATGATCCTCTCTTTGCATCTTTGATGTGCAACTACTTACTAATGGTAAATCTATCATTCACCACCAAATCAGCTTTTTTCAAAATGTATATTGATATGTAACTACATAAGGATGCTCGTGGGAGGTGTAAGCAGAAGAAATTATGTACTCTACCTAGCCCATTTGTCAGAAAAGGTTATGTTTAATAAGTTCCACTTCTATTAATCCTCATTTCGGTTAACGAACACACCTTTCTAACTTTGTCATAATCCAAACCCAGTCTCCCAGTTGTGTACCGAACAGATTCCTTTTCAGCCTAACGTCCCCCAAGTTCGGTCTTCTTTCAAGCAATCAAACCAGTTATCTTCCTAGATTGAGATCCTAAGCCCATTCCCTATCGTATAAAGCAAACCATTTCGGACAAACCTGTACATCTAGCAAGAACAGGCCAGGGGCAGAAGGAAGACTAGGATACGTGGTTTCATTTGTTTTGCGAGTTCCAGGACTTCAAATTTTAGAAGTAGGAGTGTTATATAATCATACTTATGAGTATAAAAATTCTTGTCATTATTTATTTGAAGCTGGAAATATCGATTATTAGGCGTTTTTACTATATATGTTTGTTTTTCCCTCTTCTGTCTTGGAAATTTAGGTTTAGGAGGACGTTCAACTTTCGATGAGTGGCACTGATCTCATCCATTTTTGCATCATATTCATTATCATTCTGAAAGTCGATAGTCTTCTTAGTTAATATTTTCGTGTTTGGTTGTATTACATTACCCTTGCCTGATTTCCTTCTATTAATGTTGTTTTCATTAGTGCAACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCCGATGTCTCTACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGACGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACATTACAAGAATCATCTCCGAGTTCACTGGCCATCCATTCGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCCCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAGGACAGCATTATACCTCTCGTGCCAGTGCCAGAACGAGTGAAGGCAAGTTTAAATTATATAGAAATTAGCAAAGATCCCAAAAAATTCTTGTCACCAGATGTCCCCGACGACGAGATATACTAG ATGCTTCTCAGGGAGAGGATTGTCTTCTTGGGGAACAGCATCGATGATTTTGTGGCTGATGCTATTATCAGTCAGCTTTTGCTCTTGGATGCGCAGGACTCTACTAAAGATATCAGACTTTTCATTAATTCCTCTGGCGGCTCTCTCAGTGCAACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCCGATGTCTCTACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGACGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACATTACAAGAATCATCTCCGAGTTCACTGGCCATCCATTCGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCCCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAGGACAGCATTATACCTCTCGTGCCAGTGCCAGAACGAGTGAAGGCAAGTTTAAATTATATAGAAATTAGCAAAGATCCCAAAAAATTCTTGTCACCAGATGTCCCCGACGACGAGATATACTAG ATGCTTCTCAGGGAGAGGATTGTCTTCTTGGGGAACAGCATCGATGATTTTGTGGCTGATGCTATTATCAGTCAGCTTTTGCTCTTGGATGCGCAGGACTCTACTAAAGATATCAGACTTTTCATTAATTCCTCTGGCGGCTCTCTCAGTGCAACCATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCCGATGTCTCTACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTCGGCGGTGGCACTAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGGGCGAGTGGGCAAGCAATAGACGTGGAAATTCAAGCACGTGAAATCATGCATAACAAGAACAACATTACAAGAATCATCTCCGAGTTCACTGGCCATCCATTCGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCCCCCATAGAGGCTGTAGAATATGGATTGATCGATGGAGTGATCGACAAGGACAGCATTATACCTCTCGTGCCAGTGCCAGAACGAGTGAAGGCAAGTTTAAATTATATAGAAATTAGCAAAGATCCCAAAAAATTCTTGTCACCAGATGTCCCCGACGACGAGATATACTAG MLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKDIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY Homology
BLAST of Csor.00g189570 vs. ExPASy Swiss-Prot
Match: Q94B60 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP4 PE=1 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 3.0e-92 Identity = 175/210 (83.33%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of Csor.00g189570 vs. ExPASy Swiss-Prot
Match: Q3ANI8 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) OX=110662 GN=clpP1 PE=3 SV=2) HSP 1 Score: 211.5 bits (537), Expect = 9.5e-54 Identity = 100/168 (59.52%), Postives = 135/168 (80.36%), Query Frame = 0
BLAST of Csor.00g189570 vs. ExPASy Swiss-Prot
Match: Q3B0U1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpP2 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.1e-53 Identity = 99/168 (58.93%), Postives = 134/168 (79.76%), Query Frame = 0
BLAST of Csor.00g189570 vs. ExPASy Swiss-Prot
Match: Q7V992 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=clpP1 PE=3 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52 Identity = 99/168 (58.93%), Postives = 133/168 (79.17%), Query Frame = 0
BLAST of Csor.00g189570 vs. ExPASy Swiss-Prot
Match: O34125 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpP2 PE=3 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 3.0e-52 Identity = 99/172 (57.56%), Postives = 137/172 (79.65%), Query Frame = 0
BLAST of Csor.00g189570 vs. NCBI nr
Match: KAG6577756.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 401 bits (1030), Expect = 1.38e-140 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Csor.00g189570 vs. NCBI nr
Match: KAG7015794.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 400 bits (1027), Expect = 7.87e-139 Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Csor.00g189570 vs. NCBI nr
Match: XP_023553095.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 400 bits (1027), Expect = 7.87e-139 Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Csor.00g189570 vs. NCBI nr
Match: XP_022923515.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 400 bits (1027), Expect = 4.07e-138 Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Csor.00g189570 vs. NCBI nr
Match: XP_022965370.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 398 bits (1022), Expect = 4.54e-138 Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0
BLAST of Csor.00g189570 vs. ExPASy TrEMBL
Match: A0A6J1EC18 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111431188 PE=3 SV=1) HSP 1 Score: 400 bits (1027), Expect = 1.97e-138 Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of Csor.00g189570 vs. ExPASy TrEMBL
Match: A0A6J1HNH6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111465249 PE=3 SV=1) HSP 1 Score: 398 bits (1022), Expect = 2.20e-138 Identity = 207/210 (98.57%), Postives = 209/210 (99.52%), Query Frame = 0
BLAST of Csor.00g189570 vs. ExPASy TrEMBL
Match: A0A1S3BJF4 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490719 PE=3 SV=1) HSP 1 Score: 390 bits (1001), Expect = 3.35e-135 Identity = 201/210 (95.71%), Postives = 209/210 (99.52%), Query Frame = 0
BLAST of Csor.00g189570 vs. ExPASy TrEMBL
Match: A0A6J1CWB9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111014827 PE=3 SV=1) HSP 1 Score: 389 bits (998), Expect = 9.92e-135 Identity = 201/210 (95.71%), Postives = 207/210 (98.57%), Query Frame = 0
BLAST of Csor.00g189570 vs. ExPASy TrEMBL
Match: A0A6J1FAG6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111443555 PE=3 SV=1) HSP 1 Score: 373 bits (958), Expect = 1.22e-128 Identity = 193/210 (91.90%), Postives = 203/210 (96.67%), Query Frame = 0
BLAST of Csor.00g189570 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 ) HSP 1 Score: 339.3 bits (869), Expect = 2.1e-93 Identity = 175/210 (83.33%), Postives = 191/210 (90.95%), Query Frame = 0
BLAST of Csor.00g189570 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 ) HSP 1 Score: 196.1 bits (497), Expect = 2.9e-50 Identity = 94/169 (55.62%), Postives = 129/169 (76.33%), Query Frame = 0
BLAST of Csor.00g189570 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 ) HSP 1 Score: 179.1 bits (453), Expect = 3.7e-45 Identity = 87/167 (52.10%), Postives = 124/167 (74.25%), Query Frame = 0
BLAST of Csor.00g189570 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 ) HSP 1 Score: 153.7 bits (387), Expect = 1.7e-37 Identity = 75/171 (43.86%), Postives = 111/171 (64.91%), Query Frame = 0
BLAST of Csor.00g189570 vs. TAIR 10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6 ) HSP 1 Score: 153.7 bits (387), Expect = 1.7e-37 Identity = 75/171 (43.86%), Postives = 111/171 (64.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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