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Csor.00g189270 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTAGCAGACAAGACTGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTACTATACTTTCTGGGTCATTATCCTGGTAAGTTCATCTTCCATGTTCATAGATGCTCTACCAAATGATTTCATTCGATGTACTTGATCGTGTTACTGACGGTTAAAGTATTGATATAATTAAACTTGTCTTAACTCGTCTACTTCAAGATTGATGGGTGATTTAACCTGGTACTAGAGCGTTTCGTGTTTGAACTCCTGTAATGTCATTCTTTTTATAAATTAATATTAATTTCTACTCGTTGGATCTTCAACAAATTTTCAAACGTGCGTGTGAGAAGGAGATTGTTAGAGTATTTGATATAATTAAATTTATCATAGCTCGTGAACTTAAATTTTATTTTGCTTTGTTTAATGGCAGCCGTTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGGTACTTCTGTGCTTATTAGGCATATTTGTTGGAATTGTGATGCTCAAATCCAAAAGGAAGAAGGCATGA ATGGAGTTAGCAGACAAGACTGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTACTATACTTTCTGGGTCATTATCCTGCCGTTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGGTACTTCTGTGCTTATTAGGCATATTTGTTGGAATTGTGATGCTCAAATCCAAAAGGAAGAAGGCATGA ATGGAGTTAGCAGACAAGACTGTTGGATTTTTGCTATCGCTTACCAGCTTGTCCATCTTCACTTACTATACTTTCTGGGTCATTATCCTGCCGTTTGTGGATAGTGATCACTTCATCCACAGCTATTTCTTACCACAGGAATTTGCCATCCTCATACCTGTATTTGCTGGTGTGGTACTTCTGTGCTTATTAGGCATATTTGTTGGAATTGTGATGCTCAAATCCAAAAGGAAGAAGGCATGA MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVLLCLLGIFVGIVMLKSKRKKA Homology
BLAST of Csor.00g189270 vs. ExPASy Swiss-Prot
Match: Q9CA79 (Dolichol-phosphate mannose synthase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=DPMS2 PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 2.6e-28 Identity = 62/80 (77.50%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of Csor.00g189270 vs. ExPASy Swiss-Prot
Match: Q9Z1P1 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cricetulus griseus OX=10029 GN=DPM2 PE=3 SV=3) HSP 1 Score: 86.7 bits (213), Expect = 1.3e-16 Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 0
BLAST of Csor.00g189270 vs. ExPASy Swiss-Prot
Match: Q9Z324 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Mus musculus OX=10090 GN=Dpm2 PE=3 SV=3) HSP 1 Score: 85.9 bits (211), Expect = 2.3e-16 Identity = 45/78 (57.69%), Postives = 60/78 (76.92%), Query Frame = 0
BLAST of Csor.00g189270 vs. ExPASy Swiss-Prot
Match: O94777 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Homo sapiens OX=9606 GN=DPM2 PE=1 SV=3) HSP 1 Score: 84.7 bits (208), Expect = 5.1e-16 Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Csor.00g189270 vs. ExPASy Swiss-Prot
Match: Q9Z325 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Rattus norvegicus OX=10116 GN=Dpm2 PE=1 SV=3) HSP 1 Score: 84.7 bits (208), Expect = 5.1e-16 Identity = 44/78 (56.41%), Postives = 60/78 (76.92%), Query Frame = 0
BLAST of Csor.00g189270 vs. NCBI nr
Match: XP_022923351.1 (dolichol-phosphate mannose synthase subunit 2-like [Cucurbita moschata] >XP_022923352.1 dolichol-phosphate mannose synthase subunit 2-like [Cucurbita moschata] >KAG6577726.1 Dolichol-phosphate mannose synthase subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015762.1 Dolichol-phosphate mannose synthase subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151 bits (382), Expect = 5.72e-46 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of Csor.00g189270 vs. NCBI nr
Match: XP_023552505.1 (dolichol-phosphate mannose synthase subunit 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 151 bits (381), Expect = 8.13e-46 Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of Csor.00g189270 vs. NCBI nr
Match: XP_023540556.1 (dolichol-phosphate mannose synthase subunit 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 145 bits (367), Expect = 1.11e-43 Identity = 76/80 (95.00%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of Csor.00g189270 vs. NCBI nr
Match: XP_004148753.1 (dolichol-phosphate mannose synthase subunit 2 [Cucumis sativus] >KGN55729.1 hypothetical protein Csa_010385 [Cucumis sativus]) HSP 1 Score: 145 bits (367), Expect = 1.11e-43 Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of Csor.00g189270 vs. NCBI nr
Match: XP_022925448.1 (dolichol-phosphate mannose synthase subunit 2 [Cucurbita moschata]) HSP 1 Score: 145 bits (366), Expect = 1.58e-43 Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of Csor.00g189270 vs. ExPASy TrEMBL
Match: A0A6J1E5W0 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111431073 PE=3 SV=1) HSP 1 Score: 151 bits (382), Expect = 2.77e-46 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of Csor.00g189270 vs. ExPASy TrEMBL
Match: A0A0A0L3V9 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_3G008860 PE=3 SV=1) HSP 1 Score: 145 bits (367), Expect = 5.39e-44 Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of Csor.00g189270 vs. ExPASy TrEMBL
Match: A0A6J1EF77 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111432714 PE=3 SV=1) HSP 1 Score: 145 bits (366), Expect = 7.66e-44 Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of Csor.00g189270 vs. ExPASy TrEMBL
Match: A0A1S3BL34 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucumis melo OX=3656 GN=LOC103490758 PE=3 SV=1) HSP 1 Score: 145 bits (366), Expect = 7.66e-44 Identity = 74/80 (92.50%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of Csor.00g189270 vs. ExPASy TrEMBL
Match: A0A6J1HND6 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111465224 PE=3 SV=1) HSP 1 Score: 144 bits (364), Expect = 1.55e-43 Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0
BLAST of Csor.00g189270 vs. TAIR 10
Match: AT1G74340.1 (dolichol phosphate-mannose biosynthesis regulatory protein-related ) HSP 1 Score: 125.6 bits (314), Expect = 1.8e-29 Identity = 62/80 (77.50%), Postives = 72/80 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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