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Csor.00g188970 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGTCTGCAATGGAGAAGCTCAGCAACATGGGAAGTGTTGCCAAAAAGAAGCTCAAAATTTGTAGAGCCAAACTTGACGAGAAGGTGCAAAAAGCGTCGGCGAAGACAGCGGAGGAGAGAAAGATTGCGGAGGAGCGGAGGAAGGCGGCGGAGGCGGAGGCAAAGCGGGAGCTACACGAGGCGAAAGCCCGACATGCTGCTCAAAAGCTAAGAACTAGGCAGTCACATGTACTTGGCCACCGTTTACACCATCAGCCACCGGTGGAGGGGGGCAGCGCCGCCAATGTTCCCGCTTATCCTATAGCTAGTCCGGAGGGCTACTACCCTGGACATAGAATTTAA ATGCAGTCTGCAATGGAGAAGCTCAGCAACATGGGAAGTGTTGCCAAAAAGAAGCTCAAAATTTGTAGAGCCAAACTTGACGAGAAGGTGCAAAAAGCGTCGGCGAAGACAGCGGAGGAGAGAAAGATTGCGGAGGAGCGGAGGAAGGCGGCGGAGGCGGAGGCAAAGCGGGAGCTACACGAGGCGAAAGCCCGACATGCTGCTCAAAAGCTAAGAACTAGGCAGTCACATGTACTTGGCCACCGTTTACACCATCAGCCACCGGTGGAGGGGGGCAGCGCCGCCAATGTTCCCGCTTATCCTATAGCTAGTCCGGAGGGCTACTACCCTGGACATAGAATTTAA ATGCAGTCTGCAATGGAGAAGCTCAGCAACATGGGAAGTGTTGCCAAAAAGAAGCTCAAAATTTGTAGAGCCAAACTTGACGAGAAGGTGCAAAAAGCGTCGGCGAAGACAGCGGAGGAGAGAAAGATTGCGGAGGAGCGGAGGAAGGCGGCGGAGGCGGAGGCAAAGCGGGAGCTACACGAGGCGAAAGCCCGACATGCTGCTCAAAAGCTAAGAACTAGGCAGTCACATGTACTTGGCCACCGTTTACACCATCAGCCACCGGTGGAGGGGGGCAGCGCCGCCAATGTTCCCGCTTATCCTATAGCTAGTCCGGAGGGCTACTACCCTGGACATAGAATTTAA MQSAMEKLSNMGSVAKKKLKICRAKLDEKVQKASAKTAEERKIAEERRKAAEAEAKRELHEAKARHAAQKLRTRQSHVLGHRLHHQPPVEGGSAANVPAYPIASPEGYYPGHRI Homology
BLAST of Csor.00g188970 vs. ExPASy Swiss-Prot
Match: Q39138 (Late embryogenesis abundant protein 6 OS=Arabidopsis thaliana OX=3702 GN=LEA6 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 0
BLAST of Csor.00g188970 vs. ExPASy Swiss-Prot
Match: Q96273 (Late embryogenesis abundant protein 18 OS=Arabidopsis thaliana OX=3702 GN=LEA18 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.3e-08 Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of Csor.00g188970 vs. NCBI nr
Match: KAG6577696.1 (Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015739.1 Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208 bits (529), Expect = 2.51e-67 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Csor.00g188970 vs. NCBI nr
Match: XP_022923386.1 (late embryogenesis abundant protein 6-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 207 bits (526), Expect = 7.20e-67 Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Csor.00g188970 vs. NCBI nr
Match: XP_023553167.1 (late embryogenesis abundant protein 6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203 bits (516), Expect = 2.41e-65 Identity = 111/114 (97.37%), Postives = 112/114 (98.25%), Query Frame = 0
BLAST of Csor.00g188970 vs. NCBI nr
Match: XP_022923387.1 (late embryogenesis abundant protein 6-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 200 bits (509), Expect = 2.48e-64 Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g188970 vs. NCBI nr
Match: XP_022965230.1 (late embryogenesis abundant protein 6-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 200 bits (508), Expect = 4.00e-64 Identity = 110/114 (96.49%), Postives = 111/114 (97.37%), Query Frame = 0
BLAST of Csor.00g188970 vs. ExPASy TrEMBL
Match: A0A6J1E6N7 (late embryogenesis abundant protein 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431099 PE=3 SV=1) HSP 1 Score: 207 bits (526), Expect = 3.48e-67 Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Csor.00g188970 vs. ExPASy TrEMBL
Match: A0A6J1E5Y8 (late embryogenesis abundant protein 6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431099 PE=3 SV=1) HSP 1 Score: 200 bits (509), Expect = 1.20e-64 Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g188970 vs. ExPASy TrEMBL
Match: A0A6J1HN56 (late embryogenesis abundant protein 6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465145 PE=3 SV=1) HSP 1 Score: 200 bits (508), Expect = 1.94e-64 Identity = 110/114 (96.49%), Postives = 111/114 (97.37%), Query Frame = 0
BLAST of Csor.00g188970 vs. ExPASy TrEMBL
Match: A0A6J1HL48 (late embryogenesis abundant protein 6-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465145 PE=3 SV=1) HSP 1 Score: 193 bits (491), Expect = 6.67e-62 Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0
BLAST of Csor.00g188970 vs. ExPASy TrEMBL
Match: A0A5D3CHS9 (Seed maturation protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001710 PE=3 SV=1) HSP 1 Score: 171 bits (432), Expect = 9.35e-53 Identity = 100/121 (82.64%), Postives = 105/121 (86.78%), Query Frame = 0
BLAST of Csor.00g188970 vs. TAIR 10
Match: AT1G32560.1 (Late embryogenesis abundant protein, group 1 protein ) HSP 1 Score: 77.4 bits (189), Expect = 8.2e-15 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 0
BLAST of Csor.00g188970 vs. TAIR 10
Match: AT2G35300.1 (Late embryogenesis abundant protein, group 1 protein ) HSP 1 Score: 58.2 bits (139), Expect = 5.2e-09 Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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