Csor.00g186550 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTGGTCACGTGTCGGTGGATTCTTTCCTTATATATTAACAACCTCTCATTACTCTCATTTCCATACTCTTTCTTCTTTCTCTCTCTACAAAAGCAGTGCTGTGGGTGGTGGTCGGCCGGCGAGTCTGGCTGAGCTAGGGTGTCGATTCAGCGGCGGCGGTGGGTGGTTGTTCAGGAAGAGGAAGAAGAATATTGAAATTAAAGGGTGTGTTGTAATGGGTTTTTGGCGTCAGATTATTTTTCCGGTACGGCGTGTTTGGCTCGCCGTCTATGGCCGTCTTAAAGCTCGCAAAAATGGTTAGTTTTTTTGTTCCCTTTTTGCCCTCATCTTCGTCCGTACACTTTTTTATTTATTATATATATATGAGGGAAAAAACAAAATTCCAAATTTGATAAATTTTATTTTTCTTATTTATTATTATTATTATTATTTATACCAAATAAATTATGGTAATTAAAATTAAAAATGAGGGTTTTAATTAATTAATTAACTTTATAAAGGTGGATTGGATAAAGATGAGATAAAGCAATTTTTTATGCTTCCATGTCACATAGCATTATTAATGGCTTCAAAAAAGAGGAAATTTTGTGTCTTTTTCCTTTTTTTTTTTTTTTTTTTTCAAACAAAGATGCTTCCAACAAGGAATCAGATTCATATGGCTTACTCTTTTGTACCACTTCCTATTGTTGCACATCAAAATTACACTACAAATAGATTATTTAATTTTTGAGGTTGTGGTTCGGCAGATGAAGGAGTTTTGAAACTTCACGACGATGTAGAAACGTGTGGCTATCAAGATGTAAAGGTTATGTGGGAAATATTGAAGCAATCAGAAGCTGAGTTGATCAATCATCACCAACAAACGAGGCGTAAACATAAGCCGTTTTGGAAGGATTTTTTGTGGTCTAATCCTAATTCTGACTCAACTACTAGTACGACTAAAATGATGCCTTTTCCGACTTTTAGCCCCATTTCATAAGGTGATAAGTCTAAGGCTCGTGTAAATAGAAATAATAATTGCATCGAAAAGGTTTCTAAAAAATAGCTCAAATTAATACTGGGCAAATCATCTTCACTTTTGTTAAAAGGTTCTTTTTTCTTCCTTGTGTTGGAGTTTTCAATATTTGCTTCAAATTTAGGACCATCTTACATGGGCCATTTGTTGTAAGATAGTGAAATATTGGAGTTAGAGATAACGACGGGATAGAACCAAAGATCATTTAGTTTCTGTTACGATATATTATAAGATAAGAGTGAGGTATGAACTATATATATTATATGAAAATAAGATGATGTTTGTCAAAGTGACCCTTTGACCGTGGTTGAGTAATAATTGACATGTACTATACTATTTTTCTTTCATTGTCGAGAATGATGCAATGGATACAATGATACAATGATACCAAGTTTTCCATTGTCGAGAATTGAACCCGAGTCTCTTGGGTGAAAGCTAGATATCCTAACAACTGTACGACAATGGATATTTCTTTATTTCAGTGCCTCTAAACTTCTCGATGGTCATACAAATATCCAAAATATAAAACAATGGTACCAAGTTTTCCATTGTCGGGAATTAAACTCACGTCTCTTGGATGACAATGAATGTTTCTTTGTCTTCAATGTCTCTAAACTTCTCGATGATTATACGAATATCCAAAATATAGAAATAAAATGGTACAATAATACCAAGTTTTCTATTGCCAAGAATTGAACCCAAAGAGACGTGAATGATACCATTTTTCTACTGTCAAGAATTTAACCGCTAGACGACAATAGATGTTTCTTTGTCTCAACGCCTCTAAACTTCTCAATGGCTATACAAATATCCAAAATATAATGCTATAAAAGGGTAAGTTAGTGCCAAGTTGATATCCTAACCACTAGACGATAATGGATGTTTTTTTTGTCTCAATGCCAGTAAACTTATCGGTACCATGATATAATATCCTATTCAAATATCTCATAAAATGGTACAATAATATCATCTTTTTCGTTGCCAGGAATTGAACTCCTAGTCTCTTAAGTAAAAACTAGATATCCTTACCGCTAGACAACAATAGATATTTCTTTGCCTTAACCCCTCGAAACGCTCTAAAATAACTCTATCAAATAGTAAATCGGATTGTTAGGAAGTCATATTAATTTAAGAAAGGATGATGATGCGTTTATAAGCCATAAGTGAAGGAATATATGGATAATATTTTAAGACAAAAAAGGAAAGATAAAAATATTTTTATTTCCTCAAAAGCTTATAGCGGGGGATTGCCGTATGAACTACGAGAAGATACAGTTACGGAGAAGGAGGAGATGCCTGGTAAAGCCTCAGCTCCCGTAACAATTGTAGAGCCGTTCTTCGTCCACCTGATCTGTGGCCTGCCTTCTGGATTGCTCCTTATATCTACTCTATCGATCGCATCTCCGATCCTTCTCGCACTCTCTCTTGATTAGGGTACGTCTTCTCTCAACTCGCTTCAACTTCATCCCTCCTCTTCCTTAGGTTTCTGGTTTCGAATCTGCTTTCTACATTTTGAAGGATCTATCTTCTTCTCCTTGGTCAGGCTGTTGATTGTCCGATTGTGATTCTTCTTTACAGCCGGTATCGTACGGAGCGAGAGCAATGCTCGGTATAGTTGACTCTCTTTGCTTGTTTCACTTTACTCTATTTGTTCGTGGGAAAAAAGGTGTGGAGTGTTATGGAACCAAATAACGAATTAAAATTTGGACTGTGTTCTGTGCGAATTTGCAGTACTTGAAGGCTGTGGCGCGAGGCATACTTGGACTCCCTGCTGGTTAGTATGTAAAAGCTCATTCCACTTGCCTTCTTTTGATTTTTATTAGTTTAGATTGATAATAAATGAAACAAGCATTCATAAGGAAGCCCTCTCAAAAGAATGAGTCCTCATTGTGCAAAATAGAACCTATAGAAAAATATGAAATGGCTCGAATTTGTGTTAAGTCGTTAACTACTTCTCAGATAGCGTATGGCTCAAATTTGATATGAAATGAGACTTCAAATGTCGTGCTGTGAGAGTTTTTAAAAGTGTCAGAAGGATTGTAATAGTTGTTACAGCCATTTTTGTTTTTCTTATCCAAATGATACATAGCTGTTTGGTTCTGCTCGCTGAACATGTCATAATCGGATCGATGTGGCTTTTTCTTATGCAGGTGCTATTATTAATGCTTTTGGAGAAATAGTTCTAGGCGCTCCTATTGGTGCTTTGTACGTGAATGAGTGATTGAAAAGCTATACTTCACATCTTCCATGGATTGCAAGATTTGAATATTATGGTTTGAATGGAAGATTTAATCCAGAATTTGTCCTACAAATAAGTCAAGATCTACTCTCACTTACTGCTGGTATTTTATCACCAACCATTTGTGGGAACACTACGTTTCCCTTTTCTTTCAATTCATATTGTGAATATTTCGAGTGGAATTCAAATTGGGAAGAAGATTAATCATCAGTAGCATCATTCGTCATGGTTGATTGTTTTATCATTCGTCATGTCTTAACTTTCTCGAGGCTGAATCATGATGATCATTACATTTGTTACTTTATGTGCTTTCATATACATGCTCTGAGTACTTCTCCTTCGCACAGATACTTCTCAAAGACCCATAACTGGCCTCCAGACATATTATTCTCAGTCTGTTCAGTTAAAATATCTACGTGACGTGGATGCATTCTTTTACTTGTATAAGATGTTTAGTTAATACAATAAGGTGAATACAAACTTAAAATAAAATTTTTATGTGCAATTGCAGGCCAAATGGAACTGTTGATCACATGCTATGCATTTCAGCTCATGGCGCCATTATTGGAGAGTGATTTTGCGCATGGTCCACTTGATTGGGAAAGGCCACGGCAGGTACTTGTTCTTCTGCATCTGTGTTTTCCGCATAAAACTTGGGCATGTCAAACCTCAACGACATTCAATAATGTCAATTAACAATCTCTAGTTTGAACCAAGATTTTTAAAATATTACATGATTTCAAGGAATCTAAAGAAAAAAGAGTGAATTCAAGTCTACTTATATCTTCTAACCCATGGAAATTTAGTGATAGAAAGCTAGATGATAGTGCATAGTTTTTCTTGGATCTATTCGTGATTTCTAGGCATCCTAAGAGAGAAGAACGAGTCAAGTTTGCTCATCTCAAACTTGTGAACTTAAAAAGAATAATTCAATAGATATTCTATGTGACGATGGTGTTGTATGGGATTTGAACAAGATTTCAGGATTTAGTATCAAAAAATATCTCAACCTGCCTCGTAGGTTTGCAAAGTCGAGACAAGAAAGAGAAGCTTTGCCGTTGGTTGATATAGGCACATATATAATAAGCACCCTGTTTATGTTTACACAAGTTGACTTGTGAAGAGGCACCTGTTATTAACTACACAGTAATGGGACGATAGGGTTAATGCTTTTCTTCTCCTTTTGTTCTTTTCAGCAGAGACGTGATTTAGAGGCTTTTCTAGGTTCTCCATTAACAAGTTGA ATGGTTTGGTCACGTGTCGGTGGATTCTTTCCTTATATATTAACAACCTCTCATTACTCTCATTTCCATACTCTTTCTTCTTTCTCTCTCTACAAAAGCAGTGCTGTGGGTGGTGGTCGGCCGGCGAGTCTGGCTGAGCTAGGGTGTCGATTCAGCGGCGGCGGTGGGTGGTTGTTCAGGAAGAGGAAGAAGAATATTGAAATTAAAGGGTGTGTTGTAATGGGTTTTTGGCGTCAGATTATTTTTCCGGTACGGCGTGTTTGGCTCGCCGTCTATGGCCGTCTTAAAGCTCGCAAAAATGATGAAGGAGTTTTGAAACTTCACGACGATGTAGAAACGTGTGGCTATCAAGATGTAAAGGCTGTTGATTGTCCGATTGTGATTCTTCTTTACAGCCGGTATCGTACGGAGCGAGAGCAATGCTCGTACTTGAAGGCTGTGGCGCGAGGCATACTTGGACTCCCTGCTGGTGCTATTATTAATGCTTTTGGAGAAATAGTTCTAGGCGCTCCTATTGGTGCTTTATTTAATCCAGAATTTGTCCTACAAATAAGTCAAGATCTACTCTCACTTACTGCTGGCCAAATGGAACTGTTGATCACATGCTATGCATTTCAGCTCATGGCGCCATTATTGGAGAGTGATTTTGCGCATGGTCCACTTGATTGGGAAAGGCCACGGCAGAGACGTGATTTAGAGGCTTTTCTAGGTTCTCCATTAACAAGTTGA ATGGTTTGGTCACGTGTCGGTGGATTCTTTCCTTATATATTAACAACCTCTCATTACTCTCATTTCCATACTCTTTCTTCTTTCTCTCTCTACAAAAGCAGTGCTGTGGGTGGTGGTCGGCCGGCGAGTCTGGCTGAGCTAGGGTGTCGATTCAGCGGCGGCGGTGGGTGGTTGTTCAGGAAGAGGAAGAAGAATATTGAAATTAAAGGGTGTGTTGTAATGGGTTTTTGGCGTCAGATTATTTTTCCGGTACGGCGTGTTTGGCTCGCCGTCTATGGCCGTCTTAAAGCTCGCAAAAATGATGAAGGAGTTTTGAAACTTCACGACGATGTAGAAACGTGTGGCTATCAAGATGTAAAGGCTGTTGATTGTCCGATTGTGATTCTTCTTTACAGCCGGTATCGTACGGAGCGAGAGCAATGCTCGTACTTGAAGGCTGTGGCGCGAGGCATACTTGGACTCCCTGCTGGTGCTATTATTAATGCTTTTGGAGAAATAGTTCTAGGCGCTCCTATTGGTGCTTTATTTAATCCAGAATTTGTCCTACAAATAAGTCAAGATCTACTCTCACTTACTGCTGGCCAAATGGAACTGTTGATCACATGCTATGCATTTCAGCTCATGGCGCCATTATTGGAGAGTGATTTTGCGCATGGTCCACTTGATTGGGAAAGGCCACGGCAGAGACGTGATTTAGAGGCTTTTCTAGGTTCTCCATTAACAAGTTGA MVWSRVGGFFPYILTTSHYSHFHTLSSFSLYKSSAVGGGRPASLAELGCRFSGGGGWLFRKRKKNIEIKGCVVMGFWRQIIFPVRRVWLAVYGRLKARKNDEGVLKLHDDVETCGYQDVKAVDCPIVILLYSRYRTEREQCSYLKAVARGILGLPAGAIINAFGEIVLGAPIGALFNPEFVLQISQDLLSLTAGQMELLITCYAFQLMAPLLESDFAHGPLDWERPRQRRDLEAFLGSPLTS Homology
BLAST of Csor.00g186550 vs. NCBI nr
Match: KAG6581613.1 (hypothetical protein SDJN03_21615, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 493 bits (1269), Expect = 5.85e-176 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Csor.00g186550 vs. NCBI nr
Match: KAG6606849.1 (Phosphatidylinositol-glycan biosynthesis class F protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142 bits (358), Expect = 3.01e-37 Identity = 84/170 (49.41%), Postives = 90/170 (52.94%), Query Frame = 0
BLAST of Csor.00g186550 vs. NCBI nr
Match: KAG7018111.1 (hypothetical protein SDJN02_19979 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 104 bits (259), Expect = 1.39e-24 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Csor.00g186550 vs. NCBI nr
Match: XP_022983947.1 (uncharacterized protein LOC111482415 [Cucurbita maxima]) HSP 1 Score: 103 bits (256), Expect = 3.88e-24 Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Csor.00g186550 vs. NCBI nr
Match: XP_022934534.1 (uncharacterized protein LOC111441680 [Cucurbita moschata]) HSP 1 Score: 103 bits (256), Expect = 3.88e-24 Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Csor.00g186550 vs. ExPASy TrEMBL
Match: A0A6J1J0R9 (uncharacterized protein LOC111482415 OS=Cucurbita maxima OX=3661 GN=LOC111482415 PE=4 SV=1) HSP 1 Score: 103 bits (256), Expect = 1.88e-24 Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Csor.00g186550 vs. ExPASy TrEMBL
Match: A0A6J1F2W0 (uncharacterized protein LOC111441680 OS=Cucurbita moschata OX=3662 GN=LOC111441680 PE=4 SV=1) HSP 1 Score: 103 bits (256), Expect = 1.88e-24 Identity = 46/49 (93.88%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Csor.00g186550 vs. ExPASy TrEMBL
Match: A0A0A0LD54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710210 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.92e-23 Identity = 43/49 (87.76%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of Csor.00g186550 vs. ExPASy TrEMBL
Match: A0A6J1GAT8 (phosphatidylinositol-glycan biosynthesis class F protein OS=Cucurbita moschata OX=3662 GN=LOC111452477 PE=3 SV=1) HSP 1 Score: 100 bits (249), Expect = 4.88e-22 Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of Csor.00g186550 vs. ExPASy TrEMBL
Match: A0A6J1DKK8 (phosphatidylinositol-glycan biosynthesis class F protein OS=Momordica charantia OX=3673 GN=LOC111020928 PE=3 SV=1) HSP 1 Score: 100 bits (248), Expect = 6.68e-22 Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Csor.00g186550 vs. TAIR 10
Match: AT1G16040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 1.3e-12 Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|