Csor.00g178730 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g178730
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr09: 3320592 .. 3321515 (-)
RNA-Seq Expression	Csor.00g178730
Synteny	Csor.00g178730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACGCAACAAGCCTTCATTCTCTTAACGTGCACGGCGGTCGCCGTCCTAGGGTTTTGCGCGGCGGCGTGGGCGAAACAGAGGAAGTGCGAGAAGACAGAGCGCCGACAGACGAAGGCGGCGGAGAGGTGGTGGTGGAAGGGGGCAGCGGATAGGCGGAAGGTGAGCGGCGGCGGTGGAGAGACGCCAGAGCGGCTGTTGAGCGGCGAAGGAGAAGGGGAAGGGGAAGATTTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATTTTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGAAGATTGCTGCAGGATCAAATTGCCGCCATGGAAAACGGTTACAAGGTGCTGCTTCGTAAGTTCTTTCGGAGTTTTTCTTAAAATATAAAAAATAAAAATAAAATAAAATAATTTTTACCTTAAAATTATGAATATTAATTTTAACAAATTTTTTTATTTGATCCATTGCAACTTAATTTTATTCATTTAATAAAATAAATGATTATAATTTAAGTATTTAAAAACATTTTCTTCTATCAGTTCCATAAATTAATATACTTAATTTACATGTAACAATAATCCATGATATATATATATATATATATATATTTTAAACTAATAATAAAATATTATAAATCTTATTTAAGTTGAAAAATTAATTTGGTAAATTAAAAAATTCAGAGTTAAAATTGATACGGCCAACAAATTTAATTTCAATTACTATTGAACTATATTGACTTCGTTATGCATGGTATAGGTCGGGAATGGCGTGATAGTAAACACGAGGTTGAAGGATCTACTCTAATGCGCTTCCTCTTTTATGGGAATCTTCAAAAAGAGGTGTAA

mRNA sequence

ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACGCAACAAGCCTTCATTCTCTTAACGTGCACGGCGGTCGCCGTCCTAGGGTTTTGCGCGGCGGCGTGGGCGAAACAGAGGAAGTGCGAGAAGACAGAGCGCCGACAGACGAAGGCGGCGGAGAGGTGGTGGTGGAAGGGGGCAGCGGATAGGCGGAAGGTGAGCGGCGGCGGTGGAGAGACGCCAGAGCGGCTGTTGAGCGGCGAAGGAGAAGGGGAAGGGGAAGATTTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATTTTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGAAGATTGCTGCAGGATCAAATTGCCGCCATGGAAAACGGTTACAAGGTGCTGCTTCGTCGGGAATGGCGTGATAGTAAACACGAGGTTGAAGGATCTACTCTAATGCGCTTCCTCTTTTATGGGAATCTTCAAAAAGAGGTGTAA

Coding sequence (CDS)

ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACGCAACAAGCCTTCATTCTCTTAACGTGCACGGCGGTCGCCGTCCTAGGGTTTTGCGCGGCGGCGTGGGCGAAACAGAGGAAGTGCGAGAAGACAGAGCGCCGACAGACGAAGGCGGCGGAGAGGTGGTGGTGGAAGGGGGCAGCGGATAGGCGGAAGGTGAGCGGCGGCGGTGGAGAGACGCCAGAGCGGCTGTTGAGCGGCGAAGGAGAAGGGGAAGGGGAAGATTTCGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATTTTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGAAGATTGCTGCAGGATCAAATTGCCGCCATGGAAAACGGTTACAAGGTGCTGCTTCGTCGGGAATGGCGTGATAGTAAACACGAGGTTGAAGGATCTACTCTAATGCGCTTCCTCTTTTATGGGAATCTTCAAAAAGAGGTGTAA

Protein sequence

MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWKGAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLQDQIAAMENGYKVLLRREWRDSKHEVEGSTLMRFLFYGNLQKEV

Homology

[Close]

BLAST of Csor.00g178730 vs. NCBI nr
Match: KAG6591775.1 (hypothetical protein SDJN03_14121, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352 bits (902), Expect = 2.70e-122
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYKVLLRREWRDSKHEVEGSTLMRFLFYGNLQKEV 173
           LYDERGRLLQDQIAAMENGYKVLLRREWRDSKHEVEGSTLMRFLFYGNLQKEV
Sbjct: 121 LYDERGRLLQDQIAAMENGYKVLLRREWRDSKHEVEGSTLMRFLFYGNLQKEV 173

[Close]

BLAST of Csor.00g178730 vs. NCBI nr
Match: XP_022935987.1 (uncharacterized protein LOC111442724 isoform X1 [Cucurbita moschata])

HSP 1 Score: 328 bits (841), Expect = 4.54e-113
Identity = 166/173 (95.95%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYKVLLRREWRDSKHEVEGSTLMRFLFYGNLQKEV 173
           LYDERGRLLQDQIAAMENGYKVLLRR      +EVEGSTLMRFLFYGNLQKEV
Sbjct: 121 LYDERGRLLQDQIAAMENGYKVLLRRV-----NEVEGSTLMRFLFYGNLQKEV 168

[Close]

BLAST of Csor.00g178730 vs. NCBI nr
Match: XP_023534958.1 (uncharacterized protein LOC111796532 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (795), Expect = 5.03e-106
Identity = 159/173 (91.91%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKA ERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAVERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAAD RKVSGGG ETP RLL GEGEGE  DFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADTRKVSGGG-ETPVRLLGGEGEGE--DFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYKVLLRREWRDSKHEVEGSTLMRFLFYGNLQKEV 173
           LYDERGRLLQDQIAAMENGYKVLLRR   +SK+EVEGSTLM F+FYGNLQKEV
Sbjct: 121 LYDERGRLLQDQIAAMENGYKVLLRRRRYNSKNEVEGSTLMSFVFYGNLQKEV 170

[Close]

BLAST of Csor.00g178730 vs. NCBI nr
Match: KAG7024654.1 (hypothetical protein SDJN02_13472, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295 bits (756), Expect = 2.38e-100
Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYKVLLRREWR 149
           LYDERGRLLQDQIAAMENGYKVLLR+ +R
Sbjct: 121 LYDERGRLLQDQIAAMENGYKVLLRKFFR 149

[Close]

BLAST of Csor.00g178730 vs. NCBI nr
Match: XP_022935988.1 (uncharacterized protein LOC111442724 isoform X2 [Cucurbita moschata])

HSP 1 Score: 289 bits (739), Expect = 6.84e-98
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYKV 142
           LYDERGRLLQDQIAAMENGYKV
Sbjct: 121 LYDERGRLLQDQIAAMENGYKV 142

[Close]

BLAST of Csor.00g178730 vs. ExPASy TrEMBL
Match: A0A6J1F750 (uncharacterized protein LOC111442724 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442724 PE=4 SV=1)

HSP 1 Score: 328 bits (841), Expect = 2.20e-113
Identity = 166/173 (95.95%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYKVLLRREWRDSKHEVEGSTLMRFLFYGNLQKEV 173
           LYDERGRLLQDQIAAMENGYKVLLRR      +EVEGSTLMRFLFYGNLQKEV
Sbjct: 121 LYDERGRLLQDQIAAMENGYKVLLRRV-----NEVEGSTLMRFLFYGNLQKEV 168

[Close]

BLAST of Csor.00g178730 vs. ExPASy TrEMBL
Match: A0A6J1FC12 (uncharacterized protein LOC111442724 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442724 PE=4 SV=1)

HSP 1 Score: 289 bits (739), Expect = 3.31e-98
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYKV 142
           LYDERGRLLQDQIAAMENGYKV
Sbjct: 121 LYDERGRLLQDQIAAMENGYKV 142

[Close]

BLAST of Csor.00g178730 vs. ExPASy TrEMBL
Match: A0A6J1II18 (uncharacterized protein LOC111477103 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1)

HSP 1 Score: 291 bits (744), Expect = 5.35e-98
Identity = 150/165 (90.91%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAA WAKQRKCEKTERRQTKA ERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAATWAKQRKCEKTERRQTKATERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAADRRKVSGGG ETP RLL GEGE    DFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADRRKVSGGG-ETPVRLLGGEGE----DFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYKVLLRREWRDSKHEVEGSTLMRFLF 165
           LYDERGRLLQDQIAAMENGYKVLLRR  R+SK +VEGSTLM FLF
Sbjct: 121 LYDERGRLLQDQIAAMENGYKVLLRRGRRNSKDKVEGSTLMPFLF 160

[Close]

BLAST of Csor.00g178730 vs. ExPASy TrEMBL
Match: A0A6J1IND6 (uncharacterized protein LOC111477103 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1)

HSP 1 Score: 268 bits (685), Expect = 5.65e-90
Identity = 136/147 (92.52%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAA WAKQRKCEKTERRQTKA ERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAATWAKQRKCEKTERRQTKATERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAADRRKVSGGG ETP RLL GEGE    DFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADRRKVSGGG-ETPVRLLGGEGE----DFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYKVLLRRE 147
           LYDERGRLLQDQIAAMENGYKVLLR++
Sbjct: 121 LYDERGRLLQDQIAAMENGYKVLLRKQ 142

[Close]

BLAST of Csor.00g178730 vs. ExPASy TrEMBL
Match: A0A6J1IGV7 (uncharacterized protein LOC111477103 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1)

HSP 1 Score: 260 bits (665), Expect = 8.28e-87
Identity = 132/141 (93.62%), Postives = 132/141 (93.62%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQRKCEKTERRQTKAAERWWWK 60
           MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAA WAKQRKCEKTERRQTKA ERWWWK
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAATWAKQRKCEKTERRQTKATERWWWK 60

Query: 61  GAADRRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           GAADRRKVSGGG ETP RLL GEGE    DFGSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  GAADRRKVSGGG-ETPVRLLGGEGE----DFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQDQIAAMENGYK 141
           LYDERGRLLQDQIAAMENGYK
Sbjct: 121 LYDERGRLLQDQIAAMENGYK 136

[Close]

BLAST of Csor.00g178730 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 57/158 (36.08%), Postives = 75/158 (47.47%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAA----------------WA------ 60
           MEALW LE+K KL+T++A ++L  TA AV   C AA                WA      
Sbjct: 1   MEALWKLEEKLKLTTKEAVVILVGTAAAVTLLCIAAAFLNRNSRGKQVADAEWASETAFG 60

Query: 61  -----KQRKCEKTERRQTKAAERWW-----WKGAADRRKVSGGGGETPERLLSGEGEGEG 120
                ++RKC+ ++ ++T      W     W     RR+        P  L   E     
Sbjct: 61  SRTMEEKRKCKWSKVKRTLMGSFCWSSAAKWMEMETRRQ--------PPLLAVKE----- 120

Query: 121 EDFGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERG 127
               S N+   VWQRPILMGEKCE+ ++SGLILYDE G
Sbjct: 121 ---RSLNAVDPVWQRPILMGEKCELPRFSGLILYDECG 142

[Close]

BLAST of Csor.00g178730 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 0


Query: 100 VWQRPILMGEKCEMLKYSGLILYDERGRLLQD 132
           +WQR ILMG KCE L +SG+I YD  GRLL +
Sbjct: 107 LWQREILMGGKCEPLDFSGVIYYDSNGRLLNE 138

[Close]

BLAST of Csor.00g178730 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.5e-04
Identity = 27/66 (40.91%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 65  RRKVSGGGGETPERLLSGEGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDE 124
           R+  +  GG T +  +    E + E++G       VWQR ILMG KCE L YSG+I YD 
Sbjct: 105 RKNKAYDGGPTKKTAVEMVMEEDEEEYG-------VWQREILMGGKCEPLDYSGVIYYDC 163

Query: 125 RGRLLQ 131
            G  L+
Sbjct: 165 SGHQLK 163

The following BLAST results are available for this feature:

BLAST of Csor.00g178730 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g178730 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591775.1	2.70e-122	100.00	hypothetical protein SDJN03_14121, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935987.1	4.54e-113	95.95	uncharacterized protein LOC111442724 isoform X1 [Cucurbita moschata]	[more]
XP_023534958.1	5.03e-106	91.91	uncharacterized protein LOC111796532 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7024654.1	2.38e-100	97.99	hypothetical protein SDJN02_13472, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022935988.1	6.84e-98	100.00	uncharacterized protein LOC111442724 isoform X2 [Cucurbita moschata]	[more]

BLAST of Csor.00g178730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F750	2.20e-113	95.95	uncharacterized protein LOC111442724 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FC12	3.31e-98	100.00	uncharacterized protein LOC111442724 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1II18	5.35e-98	90.91	uncharacterized protein LOC111477103 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IND6	5.65e-90	92.52	uncharacterized protein LOC111477103 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IGV7	8.28e-87	93.62	uncharacterized protein LOC111477103 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Csor.00g178730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14760.1	1.1e-13	36.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G49000.1	1.1e-05	62.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G18560.1	1.5e-04	40.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..93
None	No IPR available	PANTHER	PTHR33237:SF21	TRANSMEMBRANE PROTEIN	coord: 1..54
None	No IPR available	PANTHER	PTHR33237	F2P16.13 PROTEIN-RELATED	coord: 87..161
None	No IPR available	PANTHER	PTHR33237	F2P16.13 PROTEIN-RELATED	coord: 1..54
None	No IPR available	PANTHER	PTHR33237:SF21	TRANSMEMBRANE PROTEIN	coord: 87..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g178730.m01	Csor.00g178730.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane