Csor.00g176480 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g176480
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr09: 2246574 .. 2246927 (-)
RNA-Seq ExpressionCsor.00g176480
SyntenyCsor.00g176480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGATGCTCTTCAAGATGCAGTATCAATTTCCAAGGGCAGAGTTAAGAACTGGTCTTTGTCTCAGCCTACTTTTGGAACCCACCTTTGTAATTTCATTACTAACATGATGATTCCTGCTTGTATCTACCCTCTTACTGCACACTCCTCCTCCTGCAGGCTCTTTGGAATGAAGCATTTCATTCTTCTCTTCTGCATCGAAATTATCAGAATCGAAATCGTTGCTTCCGTCGTCGTTGTCCTCATAATTCTTATCAATGTGAGCAGCGCTGTCAAGATCAGTTTCTTTGGTTGTGTTGCTTCCAGTGTCATTGTTGCTGCACTCGCCGCTGTTTTCAGAGGCATCCACTGA

mRNA sequence

ATGCATGATGCTCTTCAAGATGCAGTATCAATTTCCAAGGGCAGAGTTAAGAACTGGTCTTTGTCTCAGCCTACTTTTGGAACCCACCTTTGTAATTTCATTACTAACATGATGATTCCTGCTTGTATCTACCCTCTTACTGCACACTCCTCCTCCTGCAGGCTCTTTGGAATGAAGCATTTCATTCTTCTCTTCTGCATCGAAATTATCAGAATCGAAATCGTTGCTTCCGTCGTCGTTGTCCTCATAATTCTTATCAATGTGAGCAGCGCTGTCAAGATCAGTTTCTTTGGTTGTGTTGCTTCCAGTGTCATTGTTGCTGCACTCGCCGCTGTTTTCAGAGGCATCCACTGA

Coding sequence (CDS)

ATGCATGATGCTCTTCAAGATGCAGTATCAATTTCCAAGGGCAGAGTTAAGAACTGGTCTTTGTCTCAGCCTACTTTTGGAACCCACCTTTGTAATTTCATTACTAACATGATGATTCCTGCTTGTATCTACCCTCTTACTGCACACTCCTCCTCCTGCAGGCTCTTTGGAATGAAGCATTTCATTCTTCTCTTCTGCATCGAAATTATCAGAATCGAAATCGTTGCTTCCGTCGTCGTTGTCCTCATAATTCTTATCAATGTGAGCAGCGCTGTCAAGATCAGTTTCTTTGGTTGTGTTGCTTCCAGTGTCATTGTTGCTGCACTCGCCGCTGTTTTCAGAGGCATCCACTGA

Protein sequence

MHDALQDAVSISKGRVKNWSLSQPTFGTHLCNFITNMMIPACIYPLTAHSSSCRLFGMKHFILLFCIEIIRIEIVASVVVVLIILINVSSAVKISFFGCVASSVIVAALAAVFRGIH
Homology
BLAST of Csor.00g176480 vs. NCBI nr
Match: KAG6591601.1 (hypothetical protein SDJN03_13947, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214 bits (544), Expect = 1.61e-69
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MHDALQDAVSISKGRVKNWSLSQPTFGTHLCNFITNMMIPACIYPLTAHSSSCRLFGMKH 60
           MHDALQDAVSISKGRVKNWSLSQPTFGTHLCNFITNMMIPACIYPLTAHSSSCRLFGMKH
Sbjct: 1   MHDALQDAVSISKGRVKNWSLSQPTFGTHLCNFITNMMIPACIYPLTAHSSSCRLFGMKH 60

Query: 61  FILLFCIEIIRIEIVASVVVVLIILINVSSAVKISFFGCVASSVIVAALAAVFRGIH 117
           FILLFCIEIIRIEIVASVVVVLIILINVSSAVKISFFGCVASSVIVAALAAVFRGIH
Sbjct: 61  FILLFCIEIIRIEIVASVVVVLIILINVSSAVKISFFGCVASSVIVAALAAVFRGIH 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6591601.11.61e-69100.00hypothetical protein SDJN03_13947, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g176480.m01Csor.00g176480.m01mRNA