Csor.00g175610 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g175610
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Protein FAM33A
Location	Csor_Chr09: 1693567 .. 1697024 (+)
RNA-Seq Expression	Csor.00g175610
Synteny	Csor.00g175610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTCGATCATCTTCATCAACATCATCAAGCAGCCGATGGATTGACGAACTTATTCACGAAGGCCAATCACGATCTCTCGGTTGTTCAATACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGACAGCGTAAGAGCAACACGATCTTCTTCTTCTTCTTCTCGTTTATTGAATGGAGGCAGTTATTAGTTTAAGAAGGAAGTTCTAAGGCTCGAAATGAATGTAGAATTGTTTATGTTTCTCTTCGCTGTTGGTAATTCATAGTTCTAGTACTAGATCTTTGAGCTTAATGTAGAATTATTCCATTCTACAGCAAAAAATCATCATAGACGCTTTCTATTTTCTTAATCGATGCACTGTTTAGTTTGAGCGCGAAGTTCAAGATCTGGAGCTCGATTTTGAACTATTTGGTTCTTTCTTTGTGTTATTCACTGTACTAATACAAGATCACAAGCTTAATGTAGGATTATTTCATTCTTCAGCGTAAGAGCATCATAGACTTTCTATTTTCTTAATCGAGGCACTGTTTAGTTTGAGCATGAAGTTAAAGATCTGGAGCTCAATTTTGAACTATTTTGTTCTCTCTCTGATGCTATTCAGTGTACTAATACAAGATCACAAGCTTAATGTAGAACTATATCATTCTTCAGCGTAAGAGCATCATAGACTCTCTATTTTCTTAGTCGAGGTACTGTTTAGTTTGATGACGATGTTCAAAATCTGGAGCTCAATGTTGAACTATTTTGTTTTCTCTTTGCTGTTATTCACTGTATTAATACAAGATCTCGAGCTTGATGTAGAATTGTTCGATTCTACATCGTAGGAGCATGTAGTCAATCCTGACAGAGTAAGAGCAACATACGTTTGAAATGAACTATTTTGTTTTCTCTGCTTCTAGACTTCTGAGCGGAGACACTATTTTAATTGAGGAGGACATAGAAGATGTTGAGCTTAATGAAGAGTTATTTCATTATCTTTTGCTATTAGCATTTGATAAGTAGTATCACAAGATCTTGAGCTTAACGACGAATTATTTCGTTCTACAATGTTAGAGCAAATAAATCCTGATAGAGTCTGGGCAACATAGTTATTTTCAAAAGTCGAGTCACTAGTTTTCATTTCAGTATTTGGTTTGAGGAGGAAGTACTCAATCTTGAGCTTAATGAGTTCTTTCATTTTTCAATCAGAACCGCAGTACTATTACAAGATTTTGAGCTTAACGTAGAATTGTTTCCTCCTCTCTTGTGCGTCAGTTTATTTCATAGTGCTAGCCAAAAATTCGTTGTAATTCTTGATTTTAAAAGGTTCGCCGTTTAATATTGTTGTTCTGAGAATGGACTATTGAACTTTCAGATTGAAGTTTTCGGAGAATTTAGTCATCCACAATTTTTCTTCATTTTCGAACTTCTGACTATATTGAGCTTTTTGATCTTTGATAAAACGTGTGATTAAAAATTTCCGTTGGTTTCTCTACAATGCATGCCACCATGTGGCAGTGATATTGGGTTCAAACACTCTTAATGACAGCGATTGTCAAGTCATTGTTTGACGGTTGAGATTGAAAGCCTCTTAAAACATGTATTGGGGACAAAGTTAACCACGGATTTATTTTGAATTCTATCTCAGATTATCCTTCATATTCTTTCTGGAAAACATGAATACGAATCTGTTGTTGCTCAACTGGTGGTTTTCATTCAAGGTTTTGTACATTATTTGCAGGCGAATCCAATGAAGTTAGCTTTAAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGTATCTTTCTGCCTTTACTTTTTCCAGATAGGTATCGACTTGAGGAAACACACGCATTTAACCTGTAAGAGTTCATGCTCTGTACTTTCTAAGTTTCTCTCTTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTCTTTCAAGAATTAGTTCTGCAACTCCAAAAGTTCACTTATATGTCCAAAAATAAATAAATACTCCATTTCACTTAGATTCCATGCAATGAAATGATATGTTATACTTAAAAAAAATGAAAATATGAAGTTTGAGCTTAGGAAACGTGATGTCTGATGATAGTAGGATGAATATAATGGTATTTTTCATAAGATATAATTACATCGAGAATATTTTGTTCAATATATTACCTACAATGAATTTCAAATAAATAAATCCTAATGCTTATTAACTATTTAGTTTTTAGTTTGTTTTTGAAATTTATGCTTGTTTTCTCCATTTTTCTTATCGTGGTTTTCACTATTCTTTTATAGTAAAATAGTAACATTTAAATTCTTAAATAACTTGCCGATGAAAAAGTAGTGTGTTTGAGTTAATGTCTTGTTCATTGGTGCCTCTTTTGCATTTTTATCGGAGAACAAGTACAGTATTTATTCTTGTTCTGCAACTGAGATTGAGTGATTTCATTACCTATTGCTAAATTATGCAAAGATGACGCGCTGTTCAAATGCAGGATGTAATTGATAAGGCTCGGACTGTTCTTGTTGGGAACAGAAACATGGTACACAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGACGATGATCCGGCATTTGTGCAATTCAAGCAGGTATCCATTGTAACACAGTGAAATGGACATTCTTGGAATTTTTTTTCTCAAGTGCTCTGTCATTTGCTTTATGTGGTTTATAAGGGTTGCAATTTCCAAGTGGTGCTTATAGTTTTTGTACCATTTGCCAGCAAGCATCCAATATTAAATATGCAAAAGGCTTTACTTACGATTGGATATCCACATTAGATGGCCTGTGGGTATTTCGATCTTTTGGATAAAGCTTACACAATCAAATGTCTCGCCCCTCCATGTAGAAGCGTCGTGTTTTTTAGTACTTTCGGAGTCATTTTTCAATGCTAAACCATATCCTGAATTTGTCTTCTGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGTAAGAGGATTCTTTTCAAGCTCTCTTGTAATTGATGTTTAGATCTATGTGTTTTGAATTCTAGCTTACAATATACTTAAAATATTGTTTGGTCTTAATATTAATTTTAATGACGAATCTTTTAGTTTATGAATTTTTTAAAAAATATATAGATTAATTTTTATAGATTTCGTGTTGATAACTCTAAAATGTAGTAATGTTTGCCTTTGCTGTCGTGTAGAAACTAGAAAGTTAGGTAGTTTGACCTTTTCTTTTTCTTATTTAGCTTAACGATTATATCTAAGGTTTAATAATTGATGTTTTATTCATTGAAATTGAATTTGGATTTGAATTGGTTCATGTTTTTCATTCAAAGTTAGTATTAATGAGAGGTAATGTAGGGGAAGATGGCCAAGAGGACGCAGAGTGTAGTGACGTCAACAAGTTGCTATTCTCGGCTGTAGTGCAGGAATAA

mRNA sequence

ATGGGGCTCGATCATCTTCATCAACATCATCAAGCAGCCGATGGATTGACGAACTTATTCACGAAGGCCAATCACGATCTCTCGGTTGTTCAATACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGACAGCGCGAATCCAATGAAGTTAGCTTTAAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACTGTTCTTGTTGGGAACAGAAACATGGTACACAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGACGATGATCCGGCATTTGTGCAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGGGAAGATGGCCAAGAGGACGCAGAGTGTAGTGACGTCAACAAGTTGCTATTCTCGGCTGTAGTGCAGGAATAA

Coding sequence (CDS)

ATGGGGCTCGATCATCTTCATCAACATCATCAAGCAGCCGATGGATTGACGAACTTATTCACGAAGGCCAATCACGATCTCTCGGTTGTTCAATACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGACAGCGCGAATCCAATGAAGTTAGCTTTAAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACTGTTCTTGTTGGGAACAGAAACATGGTACACAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGACGATGATCCGGCATTTGTGCAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGGGAAGATGGCCAAGAGGACGCAGAGTGTAGTGACGTCAACAAGTTGCTATTCTCGGCTGTAGTGCAGGAATAA

Protein sequence

MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE

Homology

[Close]

BLAST of Csor.00g175610 vs. ExPASy Swiss-Prot
Match: Q8WVK7 (Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.3e-04
Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 0


Query: 14 DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLALRIKKIRDDISTLKEQCR 73
          D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L   +  I+    TL  + +
Sbjct: 6  DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTLYARFK 65

Query: 74 EVLMAKQDVIDKARTVLVGNRNMVHKMQ 99
           V + +++   +    +    NM+ K+Q
Sbjct: 66 PVAVEQKESKSRICATVKKTMNMIQKLQ 93

[Close]

BLAST of Csor.00g175610 vs. ExPASy Swiss-Prot
Match: Q4R8E8 (Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=SKA2 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.7e-04
Identity = 26/88 (29.55%), Postives = 45/88 (51.14%), Query Frame = 0


Query: 14 DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLALRIKKIRDDISTLKEQCR 73
          D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L   +  ++    TL  + +
Sbjct: 6  DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSALKSRYQTLYARFK 65

Query: 74 EVLMAKQDVIDKARTVLVGNRNMVHKMQ 99
           V + +++   +    +    N++ K+Q
Sbjct: 66 PVAVEQKETKSRICATVNKTMNVIQKLQ 93

[Close]

BLAST of Csor.00g175610 vs. ExPASy Swiss-Prot
Match: Q2TBY0 (Spindle and kinetochore-associated protein 2 OS=Bos taurus OX=9913 GN=SKA2 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.7e-04
Identity = 28/83 (33.73%), Postives = 44/83 (53.01%), Query Frame = 0


Query: 14 DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLALRIKKIRDDISTLKEQCR 73
          D L  +F KA+ DL  +QYRLE E +  YPDSA   NP+ L   +  I+    TL  + +
Sbjct: 6  DKLELMFQKADSDLDYIQYRLEYEIKTNYPDSAGKKNPVTLLKELSAIKSRYQTLHVRFK 65

Query: 74 EVLMAKQDVIDKARTVLVGNRNM 94
           + + +++   K+R     N+ M
Sbjct: 66 PIAVEQKET--KSRICATFNKTM 86

[Close]

BLAST of Csor.00g175610 vs. NCBI nr
Match: KAG6591515.1 (hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309 bits (792), Expect = 4.44e-106
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156
           TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156

[Close]

BLAST of Csor.00g175610 vs. NCBI nr
Match: XP_022935897.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 305 bits (782), Expect = 1.49e-104
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156
           TEEWTTQVQSKIGEDGQEDAE SDVNKLLFSAVVQE
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE 156

[Close]

BLAST of Csor.00g175610 vs. NCBI nr
Match: XP_023534877.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299 bits (765), Expect = 5.82e-102
Identity = 152/156 (97.44%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNM+HKMQASMGKPFVSDDDDPAFVQFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156
           TEEWTTQVQSKIGEDGQEDAE SDVNKLLFSAVVQE
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE 156

[Close]

BLAST of Csor.00g175610 vs. NCBI nr
Match: XP_022935898.1 (spindle and kinetochore-associated protein 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 296 bits (758), Expect = 6.35e-101
Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156
           TEEWTTQVQSKI  DGQEDAE SDVNKLLFSAVVQE
Sbjct: 121 TEEWTTQVQSKI--DGQEDAESSDVNKLLFSAVVQE 154

[Close]

BLAST of Csor.00g175610 vs. NCBI nr
Match: XP_022977128.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 294 bits (753), Expect = 3.93e-100
Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTLKEQCR+VLMAKQDVIDKARTVLVGNRNM+ KMQASMGKPFVSDDDDPAFVQFKQI
Sbjct: 61  DISTLKEQCRKVLMAKQDVIDKARTVLVGNRNMLRKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156
           TEEWTTQVQSKIGEDGQEDAE SDVNKLLFSAVVQE
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE 156

[Close]

BLAST of Csor.00g175610 vs. ExPASy TrEMBL
Match: A0A6J1F6V9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1)

HSP 1 Score: 305 bits (782), Expect = 7.20e-105
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156
           TEEWTTQVQSKIGEDGQEDAE SDVNKLLFSAVVQE
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE 156

[Close]

BLAST of Csor.00g175610 vs. ExPASy TrEMBL
Match: A0A6J1FBS9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1)

HSP 1 Score: 296 bits (758), Expect = 3.07e-101
Identity = 153/156 (98.08%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156
           TEEWTTQVQSKI  DGQEDAE SDVNKLLFSAVVQE
Sbjct: 121 TEEWTTQVQSKI--DGQEDAESSDVNKLLFSAVVQE 154

[Close]

BLAST of Csor.00g175610 vs. ExPASy TrEMBL
Match: A0A6J1IP41 (Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1)

HSP 1 Score: 294 bits (753), Expect = 1.90e-100
Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTLKEQCR+VLMAKQDVIDKARTVLVGNRNM+ KMQASMGKPFVSDDDDPAFVQFKQI
Sbjct: 61  DISTLKEQCRKVLMAKQDVIDKARTVLVGNRNMLRKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156
           TEEWTTQVQSKIGEDGQEDAE SDVNKLLFSAVVQE
Sbjct: 121 TEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE 156

[Close]

BLAST of Csor.00g175610 vs. ExPASy TrEMBL
Match: A0A6J1IQK7 (Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1)

HSP 1 Score: 285 bits (729), Expect = 8.12e-97
Identity = 148/156 (94.87%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTLKEQCR+VLMAKQDVIDKARTVLVGNRNM+ KMQASMGKPFVSDDDDPAFVQFKQI
Sbjct: 61  DISTLKEQCRKVLMAKQDVIDKARTVLVGNRNMLRKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVVQE 156
           TEEWTTQVQSKI  DGQEDAE SDVNKLLFSAVVQE
Sbjct: 121 TEEWTTQVQSKI--DGQEDAESSDVNKLLFSAVVQE 154

[Close]

BLAST of Csor.00g175610 vs. ExPASy TrEMBL
Match: A0A6J1CJF1 (Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1)

HSP 1 Score: 268 bits (684), Expect = 6.75e-90
Identity = 136/154 (88.31%), Postives = 143/154 (92.86%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60
           MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRD
Sbjct: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNM+ KMQASMG P VSD DD AF QFK+I
Sbjct: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120

Query: 121 TEEWTTQVQSKIGEDGQEDAECSDVNKLLFSAVV 154
           TEEWTTQVQSKIG+DGQEDA+ +DVNKLLFSAVV
Sbjct: 121 TEEWTTQVQSKIGDDGQEDADSNDVNKLLFSAVV 154

[Close]

BLAST of Csor.00g175610 vs. TAIR 10
Match: AT2G24970.1 (unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-40
Identity = 84/152 (55.26%), Postives = 115/152 (75.66%), Query Frame = 0


Query: 3   LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDI 62
           + H H HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP +ANPMKL  RIKK+++D+
Sbjct: 1   MTHNH-HHQAVDNLLNVFSRASHDLTVVHSKLDKEFQQMYPANANPMKLIQRIKKLQEDV 60

Query: 63  STLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQITE 122
           + LK QC ++L AKQD+IDKA+T LVGN N++ KM AS+G+    D DD A   F QI +
Sbjct: 61  TLLKHQCLDLLSAKQDLIDKAQTTLVGNCNLIQKMNASLGESTNGDTDD-ALADFNQIID 120

Query: 123 EWTTQVQSK-IGEDGQEDAECSDVNKLLFSAV 154
           EWT QV+S+ +GE   EDA+  D+NK+LFSA+
Sbjct: 121 EWTMQVRSRTVGE--TEDADKEDINKMLFSAI 148

The following BLAST results are available for this feature:

BLAST of Csor.00g175610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WVK7	2.3e-04	31.82	Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=...	[more]
Q4R8E8	6.7e-04	29.55	Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=S...	[more]
Q2TBY0	8.7e-04	33.73	Spindle and kinetochore-associated protein 2 OS=Bos taurus OX=9913 GN=SKA2 PE=2 ...	[more]

BLAST of Csor.00g175610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591515.1	4.44e-106	100.00	hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935897.1	1.49e-104	99.36	spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]	[more]
XP_023534877.1	5.82e-102	97.44	spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022935898.1	6.35e-101	98.08	spindle and kinetochore-associated protein 2 isoform X2 [Cucurbita moschata]	[more]
XP_022977128.1	3.93e-100	96.15	spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g175610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6V9	7.20e-105	99.36	Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1	[more]
A0A6J1FBS9	3.07e-101	98.08	Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1	[more]
A0A6J1IP41	1.90e-100	96.15	Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1	[more]
A0A6J1IQK7	8.12e-97	94.87	Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1	[more]
A0A6J1CJF1	6.75e-90	88.31	Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1	[more]

BLAST of Csor.00g175610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24970.1	1.2e-40	55.26	unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042091	Ska2, N-terminal	PFAM	PF16740	SKA2	coord: 10..117 e-value: 2.1E-39 score: 133.8
None	No IPR available	GENE3D	6.10.250.1380		coord: 10..132 e-value: 2.4E-24 score: 87.5
IPR026762	Spindle and kinetochore-associated protein 2	PANTHER	PTHR32017	SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2	coord: 12..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g175610.m01	Csor.00g175610.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000940	outer kinetochore
cellular_component	GO:0005876	spindle microtubule
molecular_function	GO:0008017	microtubule binding