Csor.00g174170 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g174170
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Calcium-binding EF-hand
Location	Csor_Chr09: 995974 .. 998097 (-)
RNA-Seq Expression	Csor.00g174170
Synteny	Csor.00g174170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACGAATGAAGACGGCGGGTTGGGATTGTTCGAGATCAAGAACGCATTGAAGCAACTCGACGCTGAATTTCCAATCCATCTTGCCTACAAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGGAGATCGATGAATTTGTCAAGTACATGTTGAGCGAAGGCTATGTTGTATGATTTTACCGCCCCGCCGCCTCCACGATGCCTTTCTTTATCGATGGTTGATCGTTCGTTTTTAAAAAAAACTTGAAAATAAAATGGCGGCCCCGCATGTTATGTATGAATTGTTCCATCTATTTATTACTAATTCCATAATTGAAGAATAGTAATATTATGCATAATGTGTATCTTAATCTTACCTATTGTTGGGTTATATATCGATAAATTAACCCTTGAAGAAAGCAATAAAGATCGGAAAGGTTAAAAATGGCTAATAGTCTTGTGGCTTTGATTTGGGTTTCCCAAAAGGTCTCATACTAATAGAAAGATTATTCTTGAGCTTCTCAAAAAGTCTCATACCGATAGAGAGAGTATTCTTTGTTTATAAACACATGATCATCCCCTAAATTAGCCGATGTGGGACTTTCATCATCCAAATGATATCCTTTTACAGCGTTTCATTATTTGATTATATACGATAGCAAGAAAAAGAAAGCACAATCCATTTCAAAATTCTCATACCACCTCCACTAATATTCTTTTTAAAATTTGTGGGATTTATGAACCGAAAATAATATGAGAATCAAATTAATTTATATCATGGGAAGAATATAGCAAAATGATAGAATATTTAGGGTCGCTAAATATCCAGTTTAAAAGAAAATATGATATTATTTTATTCTTTTATATACACATACTTAAAATAATTAAATCATTCATTTAGATAAAAAGTGGCATGATATTTAAATATGAATCTAACCGAGTGCTATCTAGCTTTGCTTGTAAGCGAATATGTATTTCTCAAGATTCCTATTTACTTTTGCTACTCAGATTTGTTGATTCTATTTTAGCAAAATAATTATAGAGATAAAAAAAAATTGAAATTAGATAAAATAATTGTTTTTTTTAATAGTTGATATTGCCTAATTTTGTAGGATACCTCATCCTAATAATTATAAGAATAATCCAAATAAATAAATTTATTTGAATTCTGCATTTTTATTAAAAATAAATAAATTGCTCAATAATCTTTAAATAACTTGGATTCTTTTTTCTCGATGGATTAAAAATGTGAATCATGTGACATGCATATATTATTTTTTAAAAATGTCTGATTTTTATTTTATGATTTTAGTATAATTAGTCGTAAATTTTAAATTCAAAATCTAACGGGAATTAAATTATACCATTAAAAAACTTTATAAAATAAAAATGTCTAAATAGATGGGTAATCGGAATATAATTCTGTCTTCGACCCCATCTTCTATTCCTCGAAAGGGGAATCTACTCTCCTGACCAGTCTTCGAGTTTCTAAAAGTTCACAATTTTAAAAAATTAATCTATTTCGTATAAATTTGTCTTATAAAACTTTAAAATTTTAGTTTTTTTAATGTGAATTAATTTTATTTTTCTCAAACTAAAAAGAATCTCAAAACAAAAATATTTATTAAAAAGAACTTAGGAAAACGTCCACCCAGATTTGTTAATGCGACGATTCAAATTCCAAAACGCGCCGGAGCTTTTTTTTAGTTGAAAAGGCAGAGGAAGCGATCAATAAATAAGAACAACCCCTCCAACCCCGTAACTCAACCGAGAACCAAACACAAAGAACCTCGTCAAAGCCGGCGATCGGCGGAACTCGAAACAAACTCTACGGCGATGAGTTTCATCTTCCGCAACGGCGTCAGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGAGCAGCTTCGCGATATTTTCCTGAAGCACGACGGCGACGGCGATGGCCGACTTTCCCGCCTGGAACTGAAATCCGCCTTCGATTCTTTAGGATCAAACTGGAGCCGTTTCAGAGCTCGCCAGTCTCTCAAAGCCGCCGATTCCGACGGCGATGGTTACGTTACTCTCGACGAACTCGATCGCCTTCTTGATTACTCAGTAAGATGCGAGTACGCTATAATTTGA

mRNA sequence

ATGGATACGAATGAAGACGGCGGGTTGGGATTGTTCGAGATCAAGAACGCATTGAAGCAACTCGACGCTGAATTTCCAATCCATCTTGCCTACAAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGGAGATCGATGAATTTGTCAAGTACATGTTGAGCGAAGGCTATGTTAGGAAGCGATCAATAAATAAGAACAACCCCTCCAACCCCGTAACTCAACCGAGAACCAAACACAAAGAACCTCGTCAAAGCCGGCGATCGGCGGAACTCGAAACAAACTCTACGGCGATGAGTTTCATCTTCCGCAACGGCGTCAGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGAGCAGCTTCGCGATATTTTCCTGAAGCACGACGGCGACGGCGATGGCCGACTTTCCCGCCTGGAACTGAAATCCGCCTTCGATTCTTTAGGATCAAACTGGAGCCGTTTCAGAGCTCGCCAGTCTCTCAAAGCCGCCGATTCCGACGGCGATGGTTACGTTACTCTCGACGAACTCGATCGCCTTCTTGATTACTCAGTAAGATGCGAGTACGCTATAATTTGA

Coding sequence (CDS)

ATGGATACGAATGAAGACGGCGGGTTGGGATTGTTCGAGATCAAGAACGCATTGAAGCAACTCGACGCTGAATTTCCAATCCATCTTGCCTACAAGGCTCTCTGTCACGCCGATCGGAACATAGATGGAAAGCTTGGCGAGGAGGAGATCGATGAATTTGTCAAGTACATGTTGAGCGAAGGCTATGTTAGGAAGCGATCAATAAATAAGAACAACCCCTCCAACCCCGTAACTCAACCGAGAACCAAACACAAAGAACCTCGTCAAAGCCGGCGATCGGCGGAACTCGAAACAAACTCTACGGCGATGAGTTTCATCTTCCGCAACGGCGTCAGCGACTACAAGCGATGTCCAGTTCCTTTCTCCAGAGAGCAGCTTCGCGATATTTTCCTGAAGCACGACGGCGACGGCGATGGCCGACTTTCCCGCCTGGAACTGAAATCCGCCTTCGATTCTTTAGGATCAAACTGGAGCCGTTTCAGAGCTCGCCAGTCTCTCAAAGCCGCCGATTCCGACGGCGATGGTTACGTTACTCTCGACGAACTCGATCGCCTTCTTGATTACTCAGTAAGATGCGAGTACGCTATAATTTGA

Protein sequence

MDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEGYVRKRSINKNNPSNPVTQPRTKHKEPRQSRRSAELETNSTAMSFIFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII

Homology

[Close]

BLAST of Csor.00g174170 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.3e-08
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 118 PVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYV 177
           P P   E++  +F K D +GDGR+SR EL + F+SLG   +     + +  AD+DGDG++
Sbjct: 33  PAPTPEEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFI 92

Query: 178 TLDELDRL 186
           +LDE   L
Sbjct: 93  SLDEFAAL 100

[Close]

BLAST of Csor.00g174170 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-06
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 120 PFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTL 179
           P + ++   +F K D +GDGR+SR EL + F S+G   +     + ++ ADSDGDGY++L
Sbjct: 50  PAAEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISL 109

Query: 180 DE 182
            E
Sbjct: 110 GE 111

[Close]

BLAST of Csor.00g174170 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-06
Identity = 23/62 (37.10%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 124 EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELD 183
           E+L+ +F + D +GDG++S LEL   F ++G++++     + L+  D+D DGY+ LDE  
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 184 RL 186
            L
Sbjct: 82  TL 83

[Close]

BLAST of Csor.00g174170 vs. ExPASy Swiss-Prot
Match: O64943 (Polcalcin Jun o 2 OS=Juniperus oxycedrus OX=69008 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 6.9e-06
Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 122 SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE 181
           S  +L ++F K D +GDG++S  EL     SLGS+      +  ++ AD+DGDGYV+L E
Sbjct: 23  SVHELEEVFKKFDANGDGKISGSELADILRSLGSDVGEAEVKAMMEEADADGDGYVSLQE 82

[Close]

BLAST of Csor.00g174170 vs. ExPASy Swiss-Prot
Match: A0T2M3 (Polcalcin Cup a 4 OS=Hesperocyparis arizonica OX=49011 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-05
Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 122 SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE 181
           S  +L ++F K D +GDG++S  EL     S+GS       +  ++ AD+DGDGYV+L E
Sbjct: 23  SVHELEEVFKKFDANGDGKISGSELADILRSMGSEVDEAEVKAMMEEADTDGDGYVSLQE 82

[Close]

BLAST of Csor.00g174170 vs. NCBI nr
Match: KAG6591371.1 (putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 398 bits (1022), Expect = 8.45e-140
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSE 60
           MDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSE
Sbjct: 1   MDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSE 60

Query: 61  GYVRKRSINKNNPSNPVTQPRTKHKEPRQSRRSAELETNSTAMSFIFRNGVSDYKRCPVP 120
           GYVRKRSINKNNPSNPVTQPRTKHKEPRQSRRSAELETNSTAMSFIFRNGVSDYKRCPVP
Sbjct: 61  GYVRKRSINKNNPSNPVTQPRTKHKEPRQSRRSAELETNSTAMSFIFRNGVSDYKRCPVP 120

Query: 121 FSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLD 180
           FSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLD
Sbjct: 121 FSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLD 180

Query: 181 ELDRLLDYSVRCEYAII 197
           ELDRLLDYSVRCEYAII
Sbjct: 181 ELDRLLDYSVRCEYAII 197

[Close]

BLAST of Csor.00g174170 vs. NCBI nr
Match: KGN55186.1 (hypothetical protein Csa_012423 [Cucumis sativus])

HSP 1 Score: 188 bits (478), Expect = 2.17e-58
Identity = 89/96 (92.71%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 102 AMSFIFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR 161
           A+SF+F NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAF+SLGSNWSRFR
Sbjct: 2   ALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFR 61

Query: 162 ARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII 197
           ARQSLKAAD+DGDGYVTLDELDRLLDY+VRCEYAII
Sbjct: 62  ARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII 97

[Close]

BLAST of Csor.00g174170 vs. NCBI nr
Match: KAA0064377.1 (Calcium-binding EF-hand [Cucumis melo var. makuwa] >TYK20210.1 Calcium-binding EF-hand [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (460), Expect = 1.18e-55
Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 102 AMSFIFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR 161
           A++F+F NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR
Sbjct: 2   ALNFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR 61

Query: 162 ARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII 197
           ARQSLKAAD+DGDGYVTLDELD LLDY+VR EYAII
Sbjct: 62  ARQSLKAADADGDGYVTLDELDGLLDYAVRREYAII 97

[Close]

BLAST of Csor.00g174170 vs. NCBI nr
Match: KAG6608480.1 (putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166 bits (421), Expect = 9.10e-50
Identity = 77/92 (83.70%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 106 IFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQS 165
            FR+G+ DYKRCPVPF++EQLR+IFL+HD DGDGRLSRLELK+AF+SLGSNWSRFRARQ 
Sbjct: 3   FFRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQC 62

Query: 166 LKAADSDGDGYVTLDELDRLLDYSVRCEYAII 197
           LKAADS+GDGYVTLDELD LLDY+VRCEYAII
Sbjct: 63  LKAADSNGDGYVTLDELDGLLDYAVRCEYAII 94

[Close]

BLAST of Csor.00g174170 vs. NCBI nr
Match: KAG7024250.1 (hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133 bits (334), Expect = 1.23e-36
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSE 60
          MDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSE
Sbjct: 26 MDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSE 85

Query: 61 GYV 63
          GYV
Sbjct: 86 GYV 88

[Close]

BLAST of Csor.00g174170 vs. ExPASy TrEMBL
Match: A0A0A0L4V0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639740 PE=4 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.05e-58
Identity = 89/96 (92.71%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 102 AMSFIFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR 161
           A+SF+F NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAF+SLGSNWSRFR
Sbjct: 2   ALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFR 61

Query: 162 ARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII 197
           ARQSLKAAD+DGDGYVTLDELDRLLDY+VRCEYAII
Sbjct: 62  ARQSLKAADADGDGYVTLDELDRLLDYAVRCEYAII 97

[Close]

BLAST of Csor.00g174170 vs. ExPASy TrEMBL
Match: A0A5A7VBH2 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003470 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 5.73e-56
Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 102 AMSFIFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR 161
           A++F+F NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR
Sbjct: 2   ALNFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFR 61

Query: 162 ARQSLKAADSDGDGYVTLDELDRLLDYSVRCEYAII 197
           ARQSLKAAD+DGDGYVTLDELD LLDY+VR EYAII
Sbjct: 62  ARQSLKAADADGDGYVTLDELDGLLDYAVRREYAII 97

[Close]

BLAST of Csor.00g174170 vs. ExPASy TrEMBL
Match: A0A0A0L3J7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639750 PE=4 SV=1)

HSP 1 Score: 120 bits (302), Expect = 5.19e-32
Identity = 55/63 (87.30%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 1  MDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSE 60
          MDTNEDGGLGLFEIKNALK+LDAE P+HLAY ALCHADRN DGKLGEEEID+FVKYM+S+
Sbjct: 34 MDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCHADRNRDGKLGEEEIDQFVKYMMSK 93

Query: 61 GYV 63
          GYV
Sbjct: 94 GYV 96

[Close]

BLAST of Csor.00g174170 vs. ExPASy TrEMBL
Match: A0A5D3D9N2 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003460 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 3.31e-31
Identity = 54/63 (85.71%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 1  MDTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSE 60
          MDTNEDGGLGLFEIKNALK+LDAE P+HLAY ALC+ADRN DGKLGEEEID+FVKYM+S+
Sbjct: 26 MDTNEDGGLGLFEIKNALKKLDAEMPVHLAYSALCYADRNRDGKLGEEEIDQFVKYMMSK 85

Query: 61 GYV 63
          GYV
Sbjct: 86 GYV 88

[Close]

BLAST of Csor.00g174170 vs. ExPASy TrEMBL
Match: A0A5J5B553 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027270 PE=4 SV=1)

HSP 1 Score: 114 bits (286), Expect = 1.99e-28
Identity = 73/195 (37.44%), Postives = 102/195 (52.31%), Query Frame = 0


Query: 2   DTNEDGGLGLFEIKNALKQLDAEFPIHLAYKALCHADRNIDGKLGEEEIDEFVKYMLSEG 61
           DTN+DG L   E+K A + L A  P + A +ALCHAD N DG + E+E+ + V Y L   
Sbjct: 32  DTNKDGQLDKKELKEAFRHLGALIPAYRAGRALCHADYNGDGYISEQELGDLVNYALK-- 91

Query: 62  YVRKRSINKNNPSNPVTQPRTKHKEPRQSRRSAELETNSTAMSFIFRNGVSDYKRCPVPF 121
                          + QP         S +S  L      M F+      D+K   +  
Sbjct: 92  ---------------LEQP--------ASPKSLHLHN----MFFM------DFKSVELRL 151

Query: 122 SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE 181
             +QLR IF KHD D D RLSR ELK AF  LG+    +RARQ+ K AD++GDG+V+ +E
Sbjct: 152 DEDQLRKIFKKHDKDRDDRLSREELKEAFKELGACIPEYRARQAHKLADTNGDGFVSNEE 191

Query: 182 LDRLLDYSVRCEYAI 196
           + +L++Y+ +  Y I
Sbjct: 212 MSKLVEYAFKLGYTI 191

[Close]

BLAST of Csor.00g174170 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-07
Identity = 23/62 (37.10%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 124 EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELD 183
           E+L+ +F + D +GDG++S LEL   F ++G++++     + L+  D+D DGY+ LDE  
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 184 RL 186
            L
Sbjct: 82  TL 83

[Close]

BLAST of Csor.00g174170 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-07
Identity = 23/62 (37.10%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 124 EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELD 183
           E+L+ +F + D +GDG++S LEL   F ++G++++     + L+  D+D DGY+ LDE  
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 184 RL 186
            L
Sbjct: 82  TL 83

[Close]

BLAST of Csor.00g174170 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06
Identity = 28/98 (28.57%), Postives = 51/98 (52.04%), Query Frame = 0


Query: 89  QSRRSAELETNSTAMSFIFRNGVSDYKRCPVPFSREQLRDIFLKHDGDGDGRLSRLELKS 148
           Q+RR +    +S+ ++    N   +        S+E+LR +F   D DGDG++S  EL+ 
Sbjct: 28  QNRRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEELRQVFSHFDSDGDGKISAFELRH 87

Query: 149 AFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELDRLL 187
            F S+G   S   A++++   D+D DG +  ++   L+
Sbjct: 88  YFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLM 125

[Close]

BLAST of Csor.00g174170 vs. TAIR 10
Match: AT3G03410.1 (EF hand calcium-binding protein family )

HSP 1 Score: 47.0 bits (110), Expect = 2.1e-05
Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 124 EQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDELD 183
           + L+++F+  D DGDG++   E      SLG  ++   + + ++AAD DGDGY+  DE  
Sbjct: 65  KMLKEVFVFCDVDGDGKIPASESYVTMTSLGKKFTEETSAEKVRAADVDGDGYLNFDEFM 124

Query: 184 RLL 187
            L+
Sbjct: 125 ALV 127

[Close]

BLAST of Csor.00g174170 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 46.2 bits (108), Expect = 3.5e-05
Identity = 23/68 (33.82%), Postives = 37/68 (54.41%), Query Frame = 0


Query: 122 SREQLRDIFLKHDGDGDGRLSRLELKSAFDSLGSNWSRFRARQSLKAADSDGDGYVTLDE 181
           S E ++ +F + D + DG++S  ELK    +L  N S+   +  +K  D DG+G++ LDE
Sbjct: 12  SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDE 71

Query: 182 LDRLLDYS 190
              L   S
Sbjct: 72  FVALFQIS 79

The following BLAST results are available for this feature:

BLAST of Csor.00g174170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RZB5	4.3e-08	41.18	Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6L4D4	2.4e-06	40.32	Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9LE22	3.1e-06	37.10	Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ...	[more]
O64943	6.9e-06	41.67	Polcalcin Jun o 2 OS=Juniperus oxycedrus OX=69008 PE=1 SV=2	[more]
A0T2M3	1.5e-05	40.00	Polcalcin Cup a 4 OS=Hesperocyparis arizonica OX=49011 PE=1 SV=1	[more]

BLAST of Csor.00g174170 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591371.1	8.45e-140	100.00	putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. s...	[more]
KGN55186.1	2.17e-58	92.71	hypothetical protein Csa_012423 [Cucumis sativus]	[more]
KAA0064377.1	1.18e-55	90.63	Calcium-binding EF-hand [Cucumis melo var. makuwa] >TYK20210.1 Calcium-binding E...	[more]
KAG6608480.1	9.10e-50	83.70	putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. s...	[more]
KAG7024250.1	1.23e-36	100.00	hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Csor.00g174170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4V0	1.05e-58	92.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639740 PE=4 SV=1	[more]
A0A5A7VBH2	5.73e-56	90.63	Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L3J7	5.19e-32	87.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639750 PE=4 SV=1	[more]
A0A5D3D9N2	3.31e-31	85.71	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5J5B553	1.99e-28	37.44	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027270 PE=4 SV=1	[more]

BLAST of Csor.00g174170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18210.1	2.2e-07	37.10	Calcium-binding EF-hand family protein	[more]
AT1G18210.2	2.2e-07	37.10	Calcium-binding EF-hand family protein	[more]
AT3G50770.1	1.4e-06	28.57	calmodulin-like 41	[more]
AT3G03410.1	2.1e-05	34.92	EF hand calcium-binding protein family	[more]
AT1G66400.1	3.5e-05	33.82	calmodulin like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 161..189 e-value: 4.9 score: 12.2 coord: 125..153 e-value: 0.11 score: 21.5 coord: 29..57 e-value: 59.0 score: 3.5
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 123..182 e-value: 4.5E-9 score: 36.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 157..192 score: 9.603815
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 121..156 score: 13.230217
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 125..186 e-value: 1.03518E-11 score: 56.0169
None	No IPR available	GENE3D	1.10.238.10		coord: 1..192 e-value: 2.0E-17 score: 65.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..97
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 115..188
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 115..188
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 2..56
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 2..56
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 134..146
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 170..182
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 1..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g174170.m03	Csor.00g174170.m03	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding