Csor.00g171960 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g171960
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Rpr2 domain-containing protein
Location	Csor_Chr16: 3115790 .. 3119393 (+)
RNA-Seq Expression	Csor.00g171960
Synteny	Csor.00g171960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGAGGAAGGGAAATACGAAGAAAGGAGCGTCTAACCCGACATCCGGTCCGCAAGATTCGATCACTATTAGACAGGAAATCACTGGGAAATTCAAACCCAAAGTCTCTAACAATGTCAAAACTTATTTGAATCATTTGGAAAACCTAGCGACTTGGGCTAGTGGGAAAGCCTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCTACTGCAGCGGAGTCCTTGGCGGTCGCTCCCGACGCTTCTTTGTTTACCTGCCAGAGGTCCGTATGACTTCTGCCCTTTACATTCGTTTGGCTTTGCGCATCTAGATTTGTTGTTTTCGTAGTGTTTATACATGGGTAAGTCCATGATGATCGATTGTATTTGGGATGGTTTAAATTTTCTGATTAGTTCTAAATGGCACTAATCTGATGTAAACGACATTTGAATATCGAGATTTGACGCAAATTTTGTTTAACTGTAAATTATGATGTGGAAGGAATAGGGTAAGGTGCTTGGAATTATGGCTGTATTGTGAATGATTTTAGGGGTTCTGTTGTGCAATGTACCAGCAGTTTGTGGATACTTTGGCCCCTCTTGCTTGTTATCACATAGGTTTTCATATTTTATCCTGGAGTTTGTATTGTAGCAAGGTTGGGGGTGTAAGCTTGTGAATTGTACTATCTTAGTTGGGGATATCCCCTTTGGTGACAATCAGATAACCAAAGAGGCTTAAGTTTTGGGAACCCATGAAGGAAAAAGTCTTACTCAAGCTTCATAAATGGAGGTAGTTATCCAAAGGGGGAAGAAGCTTGCCTGTGTGTGTCGTAGTCCTAGTAAAATTGCCTACCTTTTTTATGTGCATCTCGTGATGCCGAGGAAAATGAGGAACTTTCTTTGGAATGGTTCTTTCGAGAGAAAGCGGAGCGATCTAGTGAATTGAAGGCAGTATCCTTACCCTTGTTAAATTAAAGGTTCAGAATTGGACACTTGAGACGAGGCGATGAAGCCCTTTTGGAAAACTGGGTTTGGTATTGCCAGGGGCAACCTGGCTTAATCAAGCACAAAATAGTGCATAGTATCTATGAGTTTGGGGAGGGATGCAAGAAGGAATGAGCCATGCACACACTGGAATATAATGACTAAGAGAAATCGTTCGAATGAAGAACTGAAGAGTTCAATGCTATTTTTGAGACTGCTTGAAAACAGGGTTATTGGTGCTGGAGTGGATGAAATAAGCTGGAATTTTGGTAGCTCTGGTGTTCTCATTCAAATCTCTAGCTTTGTCAGACAGAGAGTTCATGAGAGGTATAGAAATAGAGCTTTCAGAGGTAGTGTAAAAAAGAACATGCCACAAAAAGATCAAAACGTTAGAGTGAATAGCCTGCCTAAGTGGTCTTTTTTCTTTTTGTTTTTATTTTTTTAGGACGTTACAATTAAAACGTCCTATGGTGATCTTGAATCTGTATATGCTTATTATCCTAGGAAGAGTATAAAGGCACCATACACCTTTCTTCCATTTCGCGTTTGGCGATTGAATTTGGAACTCGTTAGTCATTGTTATAAAATTTTCGGATACTTCGGGGTTTTTCATTGATCTTTGAAAGCTTACATATCCCTTCTACAATGGGGTCCGTCTCTGAATGGAAAAACCAGGAAGATATGGCCAATGCAATCAAATCTGTTCTTTGGAGGCTGTGGATTGGGAAGAAAAAAGAAAGCATTTAACATCGAAGCTAAAGACGGGCTTGAAGTGCATGAGTTTGTTTAGTCTCATTGTGTGAGATCCCACATCGGTTGGAGAGGGAAACGAAGTATTCCTTATAAGAGTGTGAAAACCTCTCTCTAGCAGTCTCGTTTTAAAAACTTTGAGGGGAAGCCCAAAAGGGAAAGACCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTGTTACAAATGTTATTAGAGCTAGATACTGGGAAGTGTGCCAGCGAGGACATTGGCCCCCAAGGGGGTGGACTGTGAGATCCCATATTGGTTGGAGAGGGAAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAAAAGACACGTTTTAAAAACCTTGAGGAGAAGCCCTAAAGGGAAAGACCAAAGAGGACAATATTTGCTAGCGGTGGGTTTGGGCGGTTACAAATGGTATCAGAACTAGACACCAAGTCGTGTGCCAGCGAGGGCGCTGACTCCCAAGGGGGGTAGATTGTGAGATCCCACATTGGTTGGCGAGGGGAACGAAATATTTCTTATAAGGGTGTGAAAACCTCTACCTAGCATACGTGTTTTAAAAACCTTGAAGGGAAGCCCGAAAGGGAAAGTCCAAAAAGGACAATATTTACTAGTAGTGGGCTTGGAATGTGTAATATTTCTTTAGACAGTGGGTTTAACAACTCTATTCCCCTTGTAGCTAATACTAATTGAGAGGTGGGTGGGTTTTTGTAGTAACTTCAACTAACACCTTAGCTATGATGACAGAATTCTCTTCTTTCTCCTATGATCTTCCATGGAACTCATAATCAAAAAATGTTTGCACGTATCTCATTAGACAAGCCTGAGCATTAAAATATGCTCATTGACGCTTATTGTTAAATTTTTACCGTTACTTCGAAAAAAGAAACCTACTAATGTTTTAATTCAATGAATGGAGCGGGCAATCGACTCAAACCATATAGCAGTTTTATCATGTCACATTTGAATGTTGTCTTGGCATCTTACTTGATTCTGCTTTGGCTACAAAGCTAGCCAATCTTACCTGTTCTATTATATTGCATTTAGGTGTGAAACAATTCTTCAACCTGGCTCTAACTGTTCTATACGAATAGAGAAGAATAACGCCAAGAGACGTCGGAGACAGAAGAAATGTTGTAATTCGACACAGAACAATGTGGCGTATTATTGCCACCACTGCTCGTGTAGGAACATAAAGAGAGGAACTCCCAAAGGCCATATGAAAGTGCTATACGATGCAGCGTTTGAAAGAAGGGTGAAGCCTGTGGATGTTAAGGATGGTAAAGAATGTGAGACATCTGCAGTGGAGAGGCCAACTGAGATTCTTACCATTGATGCTCCTAAAATTCCTGATGCTTCTGCAATTCCTCCTCCAACTGGGGACATCACTGCTCTTGATAACCCTGCAATTCAGCTTCCAAAAACGGAGGGCATTCTTAATATTAATTCTCCAGCAACTCCGTCCGCCGTGAGCATAACGACACTGTCGAAACCGCAGAAATGGAAAATGACGACGACATTATCAGAGAAACATATTGGACACGAGACTAGAACAGACAGGGAGAAGAAAACTGGGGCTGTTCCTACTGTTGATACACCCGCCACCCCTTCCACCTCGACCGGAGTGACTCTGTTGGATTCGAAGAAGAGAAAGAGGAACAAGCCATCGTCTAAGAATCAAACCGAACCCGGAAGTTGCTCTGCTCCAACAGCAGATGGGGATAGAAGTGAAGGCACATCCAAAAGGAATCGTAAAAGAAAATCATGGACAAGTTTGAAGGAAGTTGCTCGGACGAATGAACAGAGTGGTAAACAAAAAAACATGGCTGAACTGGCAATTCCATTCTCCTTGTATTAA

mRNA sequence

ATGGCGAAGAGGAAGGGAAATACGAAGAAAGGAGCGTCTAACCCGACATCCGGTCCGCAAGATTCGATCACTATTAGACAGGAAATCACTGGGAAATTCAAACCCAAAGTCTCTAACAATGTCAAAACTTATTTGAATCATTTGGAAAACCTAGCGACTTGGGCTAGTGGGAAAGCCTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCTACTGCAGCGGAGTCCTTGGCGGTCGCTCCCGACGCTTCTTTGTTTACCTGCCAGAGGTGTGAAACAATTCTTCAACCTGGCTCTAACTGTTCTATACGAATAGAGAAGAATAACGCCAAGAGACGTCGGAGACAGAAGAAATGTTGTAATTCGACACAGAACAATGTGGCGTATTATTGCCACCACTGCTCGTGTAGGAACATAAAGAGAGGAACTCCCAAAGGCCATATGAAAGTGCTATACGATGCAGCGTTTGAAAGAAGGGTGAAGCCTGTGGATGTTAAGGATGGTAAAGAATGTGAGACATCTGCAGTGGAGAGGCCAACTGAGATTCTTACCATTGATGCTCCTAAAATTCCTGATGCTTCTGCAATTCCTCCTCCAACTGGGGACATCACTGCTCTTGATAACCCTGCAATTCAGCTTCCAAAAACGGAGGGCATTCTTAATATTAATTCTCCAGCAACTCCGTCCGCCGTGAGCATAACGACACTGTCGAAACCGCAGAAATGGAAAATGACGACGACATTATCAGAGAAACATATTGGACACGAGACTAGAACAGACAGGGAGAAGAAAACTGGGGCTGTTCCTACTGTTGATACACCCGCCACCCCTTCCACCTCGACCGGAGTGACTCTGTTGGATTCGAAGAAGAGAAAGAGGAACAAGCCATCGTCTAAGAATCAAACCGAACCCGGAAGTTGCTCTGCTCCAACAGCAGATGGGGATAGAAGTGAAGGCACATCCAAAAGGAATCGTAAAAGAAAATCATGGACAAGTTTGAAGGAAGTTGCTCGGACGAATGAACAGAGTGGTAAACAAAAAAACATGGCTGAACTGGCAATTCCATTCTCCTTGTATTAA

Coding sequence (CDS)

ATGGCGAAGAGGAAGGGAAATACGAAGAAAGGAGCGTCTAACCCGACATCCGGTCCGCAAGATTCGATCACTATTAGACAGGAAATCACTGGGAAATTCAAACCCAAAGTCTCTAACAATGTCAAAACTTATTTGAATCATTTGGAAAACCTAGCGACTTGGGCTAGTGGGAAAGCCTCTATTCCTTCATTGGCTGCTTTCTTTGGGCAGCGCCTCGCTACTGCAGCGGAGTCCTTGGCGGTCGCTCCCGACGCTTCTTTGTTTACCTGCCAGAGGTGTGAAACAATTCTTCAACCTGGCTCTAACTGTTCTATACGAATAGAGAAGAATAACGCCAAGAGACGTCGGAGACAGAAGAAATGTTGTAATTCGACACAGAACAATGTGGCGTATTATTGCCACCACTGCTCGTGTAGGAACATAAAGAGAGGAACTCCCAAAGGCCATATGAAAGTGCTATACGATGCAGCGTTTGAAAGAAGGGTGAAGCCTGTGGATGTTAAGGATGGTAAAGAATGTGAGACATCTGCAGTGGAGAGGCCAACTGAGATTCTTACCATTGATGCTCCTAAAATTCCTGATGCTTCTGCAATTCCTCCTCCAACTGGGGACATCACTGCTCTTGATAACCCTGCAATTCAGCTTCCAAAAACGGAGGGCATTCTTAATATTAATTCTCCAGCAACTCCGTCCGCCGTGAGCATAACGACACTGTCGAAACCGCAGAAATGGAAAATGACGACGACATTATCAGAGAAACATATTGGACACGAGACTAGAACAGACAGGGAGAAGAAAACTGGGGCTGTTCCTACTGTTGATACACCCGCCACCCCTTCCACCTCGACCGGAGTGACTCTGTTGGATTCGAAGAAGAGAAAGAGGAACAAGCCATCGTCTAAGAATCAAACCGAACCCGGAAGTTGCTCTGCTCCAACAGCAGATGGGGATAGAAGTGAAGGCACATCCAAAAGGAATCGTAAAAGAAAATCATGGACAAGTTTGAAGGAAGTTGCTCGGACGAATGAACAGAGTGGTAAACAAAAAAACATGGCTGAACTGGCAATTCCATTCTCCTTGTATTAA

Protein sequence

MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKKCCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVERPTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSLY

Homology

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BLAST of Csor.00g171960 vs. NCBI nr
Match: KAG6577189.1 (hypothetical protein SDJN03_24763, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015188.1 hypothetical protein SDJN02_22821, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 701 bits (1808), Expect = 4.09e-254
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
           IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120

Query: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER
Sbjct: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180

Query: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240
           PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK
Sbjct: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240

Query: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300
           PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS
Sbjct: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300

Query: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360
           KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL
Sbjct: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360

[Close]

BLAST of Csor.00g171960 vs. NCBI nr
Match: XP_022931505.1 (uncharacterized protein LOC111437660 [Cucurbita moschata])

HSP 1 Score: 689 bits (1779), Expect = 1.08e-249
Identity = 355/361 (98.34%), Postives = 358/361 (99.17%), Query Frame = 0


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
           IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120

Query: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKP+DVKDGKECETSAVER
Sbjct: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPLDVKDGKECETSAVER 180

Query: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240
           PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLP+TEGILNINSPA PS VSITTLSK
Sbjct: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPETEGILNINSPAAPSTVSITTLSK 240

Query: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300
           PQKWKMTTTLSEKHIGHETRTD+EKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS
Sbjct: 241 PQKWKMTTTLSEKHIGHETRTDKEKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300

Query: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360
           KNQTE GSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL
Sbjct: 301 KNQTELGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360

[Close]

BLAST of Csor.00g171960 vs. NCBI nr
Match: XP_023553160.1 (uncharacterized protein LOC111810649 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 657 bits (1695), Expect = 6.32e-237
Identity = 343/361 (95.01%), Postives = 352/361 (97.51%), Query Frame = 0


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
           IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNN KRRRRQKK
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNTKRRRRQKK 120

Query: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           C NSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDG+ECETSAVE+
Sbjct: 121 CSNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGQECETSAVEK 180

Query: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240
           PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQL +T+ ILNINSPATPS +S+TTLSK
Sbjct: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQL-RTKAILNINSPATPSTLSVTTLSK 240

Query: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300
            QK +MTT LSEKHIGHE RTD+EKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS
Sbjct: 241 SQKQEMTT-LSEKHIGHEIRTDKEKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300

Query: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360
           KNQT+PGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL
Sbjct: 301 KNQTDPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 359

[Close]

BLAST of Csor.00g171960 vs. NCBI nr
Match: XP_022984531.1 (uncharacterized protein LOC111482797 [Cucurbita maxima])

HSP 1 Score: 645 bits (1665), Expect = 2.27e-232
Identity = 342/361 (94.74%), Postives = 348/361 (96.40%), Query Frame = 0


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
           IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120

Query: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           C NS QNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER
Sbjct: 121 CSNSRQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180

Query: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240
           PTEILTIDAPKIPDASAIPP TGDITALDNPAIQL +T+GILNINSPATPS +S+TTL K
Sbjct: 181 PTEILTIDAPKIPDASAIPP-TGDITALDNPAIQL-QTKGILNINSPATPSTLSVTTLLK 240

Query: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300
            QK +MTT LSEKHIGH+ RTD EKKTGAVPTVD PATPSTSTGVTLLDSKKRKRNKPSS
Sbjct: 241 SQKREMTT-LSEKHIGHDIRTDEEKKTGAVPTVDAPATPSTSTGVTLLDSKKRKRNKPSS 300

Query: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360
           KNQTEP SCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL
Sbjct: 301 KNQTEPRSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 358

[Close]

BLAST of Csor.00g171960 vs. NCBI nr
Match: XP_038906436.1 (uncharacterized protein LOC120092350 isoform X1 [Benincasa hispida])

HSP 1 Score: 456 bits (1173), Expect = 2.01e-157
Identity = 255/371 (68.73%), Postives = 286/371 (77.09%), Query Frame = 0


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAK+KGN KKG+SNPTSGPQDSIT+RQEITGK KPKVSNNVK YLNHLENLATWA G+ S
Sbjct: 1   MAKKKGNAKKGSSNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLENLATWACGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
           IPSLA FFGQRLA AAESLAVAPDASLF CQRCETILQPGSNCSIRIEKNNAKRRR+  K
Sbjct: 61  IPSLATFFGQRLAAAAESLAVAPDASLFLCQRCETILQPGSNCSIRIEKNNAKRRRKHNK 120

Query: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           C N TQN VAYYCH+CSCRNIKRGTPKGHMKVLY   F  ++K V V+DGKECE      
Sbjct: 121 CSNLTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTEFVSKLKSVGVEDGKECENKISPL 180

Query: 181 PT-EILTIDAPKIP----------DASAIPPPTGDITALDNPAIQLPKTEGILNINSPAT 240
           PT   LTID P IP          D  AIPP TGDI+ +D P    P+T+ ILNIN+PAT
Sbjct: 181 PTGNRLTIDTPAIPPSTTGEDQNIDTRAIPP-TGDISVVDGPVFSSPRTKDILNINAPAT 240

Query: 241 PSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLD 300
           PS +S+ TLS+ QK K+   LS K  G  +    E++ G +PTVD PATP T TG+TLLD
Sbjct: 241 PSTLSVQTLSRSQKMKL---LSNKQTGPASV---EERVGDIPTVDAPATPPTMTGITLLD 300

Query: 301 SKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQK 360
           SK+RKR KPSSKNQTEP S SAPT  GD++ G SKR R RKSWTSLKE+A+ +E+ GKQ 
Sbjct: 301 SKRRKRKKPSSKNQTEPES-SAPTTYGDKTVGMSKRKRNRKSWTSLKEIAQRDEERGKQ- 360

[Close]

BLAST of Csor.00g171960 vs. ExPASy TrEMBL
Match: A0A6J1EZL5 (uncharacterized protein LOC111437660 OS=Cucurbita moschata OX=3662 GN=LOC111437660 PE=4 SV=1)

HSP 1 Score: 689 bits (1779), Expect = 5.21e-250
Identity = 355/361 (98.34%), Postives = 358/361 (99.17%), Query Frame = 0


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
           IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120

Query: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKP+DVKDGKECETSAVER
Sbjct: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPLDVKDGKECETSAVER 180

Query: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240
           PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLP+TEGILNINSPA PS VSITTLSK
Sbjct: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPETEGILNINSPAAPSTVSITTLSK 240

Query: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300
           PQKWKMTTTLSEKHIGHETRTD+EKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS
Sbjct: 241 PQKWKMTTTLSEKHIGHETRTDKEKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300

Query: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360
           KNQTE GSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL
Sbjct: 301 KNQTELGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360

[Close]

BLAST of Csor.00g171960 vs. ExPASy TrEMBL
Match: A0A6J1J5I6 (uncharacterized protein LOC111482797 OS=Cucurbita maxima OX=3661 GN=LOC111482797 PE=4 SV=1)

HSP 1 Score: 645 bits (1665), Expect = 1.10e-232
Identity = 342/361 (94.74%), Postives = 348/361 (96.40%), Query Frame = 0


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS
Sbjct: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
           IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK
Sbjct: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120

Query: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180
           C NS QNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER
Sbjct: 121 CSNSRQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETSAVER 180

Query: 181 PTEILTIDAPKIPDASAIPPPTGDITALDNPAIQLPKTEGILNINSPATPSAVSITTLSK 240
           PTEILTIDAPKIPDASAIPP TGDITALDNPAIQL +T+GILNINSPATPS +S+TTL K
Sbjct: 181 PTEILTIDAPKIPDASAIPP-TGDITALDNPAIQL-QTKGILNINSPATPSTLSVTTLLK 240

Query: 241 PQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPSTSTGVTLLDSKKRKRNKPSS 300
            QK +MTT LSEKHIGH+ RTD EKKTGAVPTVD PATPSTSTGVTLLDSKKRKRNKPSS
Sbjct: 241 SQKREMTT-LSEKHIGHDIRTDEEKKTGAVPTVDAPATPSTSTGVTLLDSKKRKRNKPSS 300

Query: 301 KNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 360
           KNQTEP SCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL
Sbjct: 301 KNQTEPRSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVARTNEQSGKQKNMAELAIPFSL 358

[Close]

BLAST of Csor.00g171960 vs. ExPASy TrEMBL
Match: A0A6J1C4C1 (uncharacterized protein LOC111008256 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008256 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 8.67e-146
Identity = 248/386 (64.25%), Postives = 280/386 (72.54%), Query Frame = 0


Query: 1   MAKR-KGNTKKGASNPTSG-PQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGK 60
           MAK+ +G  K GASN T G PQDSIT+RQE TGK +PK  NNVK YL+HLENLATWASG+
Sbjct: 1   MAKKNRGKKKIGASNSTPGRPQDSITLRQEKTGKIQPKPYNNVKIYLSHLENLATWASGQ 60

Query: 61  ASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQ 120
           ASIPSLAAFFG+R A AA+S  V PDASLF CQRCETILQPGSNCSIRIEKN AKRRR+ 
Sbjct: 61  ASIPSLAAFFGRRFAAAADSSGVVPDASLFLCQRCETILQPGSNCSIRIEKNKAKRRRKH 120

Query: 121 KKCCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLY---DAAFER--------RVKPVDV 180
            KC N TQNN+ YYCH+CSCRNIKRGTPKGHMKV Y     A E         +VK ++V
Sbjct: 121 NKCSNLTQNNLVYYCHYCSCRNIKRGTPKGHMKVRYAQKSKAVEESEPIESKSKVKVLNV 180

Query: 181 KDGKECETSAVERPTEILTIDAPKIP----------DASAIPPPTGDITALDNPAIQLPK 240
           + GKECE +AV+  TEILTIDAP IP          DA   PP TGD   +   AI  P+
Sbjct: 181 RRGKECEATAVQMTTEILTIDAPMIPSPTTREIGTIDAPIAPPTTGDTLVVGASAILPPR 240

Query: 241 TEGILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETR---TDREKKTGAVPTVD 300
            E IL IN+PATP  VS TTLSK QK K     ++   G E     TD EKKTG +PTVD
Sbjct: 241 MEDILIINAPATPPTVSGTTLSKSQKRKKRKLAAKNQTGPENSCAPTDSEKKTGDIPTVD 300

Query: 301 TPATPSTSTGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTS 360
            PATP    G+TLL+SKKRKR KPSSKNQTEP S  APTA+GD++EGTSKR RKRKSWTS
Sbjct: 301 APATPPAMIGMTLLESKKRKRKKPSSKNQTEPESSCAPTAEGDKTEGTSKRKRKRKSWTS 360

[Close]

BLAST of Csor.00g171960 vs. ExPASy TrEMBL
Match: A0A5D3CYJ3 (Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004600 PE=4 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 3.92e-139
Identity = 234/380 (61.58%), Postives = 269/380 (70.79%), Query Frame = 0


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MA++KGNTK+G+SNPTSGPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
           +PSLAAFFGQRLA AAESLAVAPD SLF C RCET+LQPGSNC IRIEKNNAK+RRR KK
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120

Query: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETS--AV 180
             N TQN VAYYCH+CSCRNIKRGTPKGHMKVLY      +VK V VKDGKECE     V
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180

Query: 181 ERPT-------EILTIDAPKIP-----------DASAIPPPTGDITALDNPAIQLPKTEG 240
           + PT       + LTID P IP           D +A+PP T DI+  D PAI  P+T  
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPP-TEDISVDDGPAISSPRT-- 240

Query: 241 ILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPS 300
                +PA PS  S+T++S+ Q                           +PT+D PATP 
Sbjct: 241 -----TPAIPSTSSVTSMSRSQ------------------------VRDIPTLDAPATPL 300

Query: 301 TSTGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVAR 360
           T T +TLLDSK+RKR KPSSKN+TEP SCSAPT+ G++SE TSKR R RKSWTSLKE+A+
Sbjct: 301 TLTAMTLLDSKRRKRKKPSSKNRTEPESCSAPTSHGEKSEDTSKRKRNRKSWTSLKEIAQ 347

[Close]

BLAST of Csor.00g171960 vs. ExPASy TrEMBL
Match: A0A1S3BU13 (uncharacterized protein LOC103493157 OS=Cucumis melo OX=3656 GN=LOC103493157 PE=4 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 3.92e-139
Identity = 234/380 (61.58%), Postives = 269/380 (70.79%), Query Frame = 0


Query: 1   MAKRKGNTKKGASNPTSGPQDSITIRQEITGKFKPKVSNNVKTYLNHLENLATWASGKAS 60
           MA++KGNTK+G+SNPTSGPQ+SIT+RQE TGK KPKVSNN K YLNHLENLATWASG+ S
Sbjct: 1   MARKKGNTKRGSSNPTSGPQNSITLRQEATGKIKPKVSNNAKVYLNHLENLATWASGQPS 60

Query: 61  IPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETILQPGSNCSIRIEKNNAKRRRRQKK 120
           +PSLAAFFGQRLA AAESLAVAPD SLF C RCET+LQPGSNC IRIEKNNAK+RRR KK
Sbjct: 61  LPSLAAFFGQRLAAAAESLAVAPDPSLFLCARCETVLQPGSNCYIRIEKNNAKKRRRHKK 120

Query: 121 CCNSTQNNVAYYCHHCSCRNIKRGTPKGHMKVLYDAAFERRVKPVDVKDGKECETS--AV 180
             N TQN VAYYCH+CSCRNIKRGTPKGHMKVLY      +VK V VKDGKECE     V
Sbjct: 121 ASNVTQNVVAYYCHYCSCRNIKRGTPKGHMKVLYGTECVSKVKSVVVKDGKECENKILTV 180

Query: 181 ERPT-------EILTIDAPKIP-----------DASAIPPPTGDITALDNPAIQLPKTEG 240
           + PT       + LTID P IP           D +A+PP T DI+  D PAI  P+T  
Sbjct: 181 DAPTTPPLTTVDCLTIDTPAIPSLSTTRDDVAVDTTAVPP-TEDISVDDGPAISSPRT-- 240

Query: 241 ILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVPTVDTPATPS 300
                +PA PS  S+T++S+ Q                           +PT+D PATP 
Sbjct: 241 -----TPAIPSTSSVTSMSRSQ------------------------VRDIPTLDAPATPL 300

Query: 301 TSTGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKSWTSLKEVAR 360
           T T +TLLDSK+RKR KPSSKN+TEP SCSAPT+ G++SE TSKR R RKSWTSLKE+A+
Sbjct: 301 TLTAMTLLDSKRRKRKKPSSKNRTEPESCSAPTSHGEKSEDTSKRKRNRKSWTSLKEIAQ 347

[Close]

BLAST of Csor.00g171960 vs. TAIR 10
Match: AT5G41270.1 (CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-26
Identity = 103/329 (31.31%), Postives = 142/329 (43.16%), Query Frame = 0


Query: 40  NVKTYL--NHLENLATWAS-GKASIPSLAAFFGQRLATAAESLAVAPDASLFTCQRCETI 99
           N+K+ L   HL+NLA W+S G   IPSLA+  G+RLA   ES  +  D  L +CQRCETI
Sbjct: 19  NLKSVLRHEHLKNLALWSSTGDTPIPSLASLLGRRLAADTESTGITTDPDLVSCQRCETI 78

Query: 100 LQPGSNCSIRIEKNNAKRRRRQKKCCNST-----QNNVAYYCHHCSCRNIKRGTPKGHMK 159
           L+PG NC++RIEK +A  ++++ +C  S      QNNV Y+C+ CS RN+KRGT KG MK
Sbjct: 79  LKPGFNCNVRIEKVSANVKKKRNRCKKSNNICFPQNNVVYHCNFCSHRNLKRGTAKGQMK 138

Query: 160 VLYDAAFERRVKPVDVKDGKECETSAVERPTEILTIDAPKIPDASAIPPPTGDITALDNP 219
            LY        KP   +  +                  PKI     +             
Sbjct: 139 ELYP------FKPKTARSSR------------------PKIKKEMTM------------- 198

Query: 220 AIQLPKTEGILNINSPATPSAVSITTLSKPQKWKMTTTLSEKHIGHETRTDREKKTGAVP 279
                             P  +    LS P++  +   + EK +G               
Sbjct: 199 ------------------PQEIQSNMLSSPER-SVKDQVEEKSVG--------------- 258

Query: 280 TVDTPATPSTSTGVTLLDSKKRKRNKPSSKNQTEPGSCSAPTADGDRSEGTSKRNRKRKS 339
             DTP        + L   + R+  KP SK  +EP S    T  G      S + +++  
Sbjct: 259 --DTPKP------MMLTLERDRRIRKPKSKKPSEPQSVPEKTVGG------SNKRKRKSP 258

Query: 340 WTSLKEVARTNEQSGKQKNMAELAIPFSL 361
           WTS+KE+A TN    K        IPF L
Sbjct: 319 WTSMKEIAETN----KSSKAGNFKIPFLL 258

The following BLAST results are available for this feature:

BLAST of Csor.00g171960 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g171960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577189.1	4.09e-254	100.00	hypothetical protein SDJN03_24763, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022931505.1	1.08e-249	98.34	uncharacterized protein LOC111437660 [Cucurbita moschata]	[more]
XP_023553160.1	6.32e-237	95.01	uncharacterized protein LOC111810649 [Cucurbita pepo subsp. pepo]	[more]
XP_022984531.1	2.27e-232	94.74	uncharacterized protein LOC111482797 [Cucurbita maxima]	[more]
XP_038906436.1	2.01e-157	68.73	uncharacterized protein LOC120092350 isoform X1 [Benincasa hispida]	[more]

BLAST of Csor.00g171960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZL5	5.21e-250	98.34	uncharacterized protein LOC111437660 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]
A0A6J1J5I6	1.10e-232	94.74	uncharacterized protein LOC111482797 OS=Cucurbita maxima OX=3661 GN=LOC111482797...	[more]
A0A6J1C4C1	8.67e-146	64.25	uncharacterized protein LOC111008256 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3CYJ3	3.92e-139	61.58	Rpr2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BU13	3.92e-139	61.58	uncharacterized protein LOC103493157 OS=Cucumis melo OX=3656 GN=LOC103493157 PE=...	[more]

BLAST of Csor.00g171960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41270.1	1.7e-26	31.31	CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Ha...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007175	Ribonuclease P subunit, Rpr2/Snm1/Rpp21	PFAM	PF04032	Rpr2	coord: 45..136 e-value: 5.7E-10 score: 39.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..269
None	No IPR available	PANTHER	PTHR36072	OS01G0541600 PROTEIN	coord: 1..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g171960.m01	Csor.00g171960.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034470	ncRNA processing
biological_process	GO:0006396	RNA processing
cellular_component	GO:1902494	catalytic complex
cellular_component	GO:1990904	ribonucleoprotein complex