Csor.00g171540 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g171540
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ribonuclease T(2)
Location	Csor_Chr18: 7746333 .. 7747920 (-)
RNA-Seq Expression	Csor.00g171540
Synteny	Csor.00g171540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGTATTCATCTTTTCGTGCTCTTCCTCTCGAGTTTGATCTTGTTTGTGAATGCACAGTTTGAATACTTTCAAATGGTTCAACAATGGCCACTGGCTACATGCACAGGTACCCCGTGCCTTAATCCACCTTCAAACAAGTTTACTATTCACGGTCTTTGGCCGAGCAACTTCTCCAATGCCATACTTGTTTGCAAAGGATCAACATTTAATTCAACCAATACGGTACCATATACTACGATATAGAAAATGAGCATTTTTTTTTCTCCATTTAAAACTATATAACTCTAGCCATTTATTGTCCCTTTTTTCTTGTTTCTCTAAGACATTTTTTTTTAGTCTTTTTCACATTTCTCCGACATATAATTCGAAAGCTATGTTCTCAAATACTCTCGAAATATAAAATCATGAATTTGTATATATGAAGTTATAGTTTTAAAATTTTATAAATCCATTTTAAATTTAAAGAAATTATTGCATCATTTGTTTTAATATAATGCTTAAAAAAAATTTATTAATTTTTTTAAAATTTTTTAAGAATGGATAATAATGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTCGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAAGCCTCATACCAATGGAGGTAGTATTCCTCACTTATAAACCCATGATCACACCCTAAATTAGTCGATGTGGGACTTCCATCATCTAACACCTCCCCTCGAACAAAGTGCGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTGACTGCCTTCGAGGAGGGGCTTGGCTCCTTTTCTTTAAGAGTTCTTTGTTCGATATTTGAGGACTTACCAATCTATTGTGGCACAACTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACGACTCTCCACAATGGTATGATATTGCCCACTTTGAGCATAAGTTCTCATGGCCTTGCTTTGGGCTTCCCCAAAAGGCCTCACACCAATGGAGTTAGTATTCCTCACTTATAAACTCATGATTGATCATTCCCTAAATTAGTCGATGTGGGACTTCCATCATCCAACAAATAAGACATCCTTCAAAATAACTACTATTCTTTGGATCTATGTTCTAAGTGGGTTTTTTTTTGTTCAGGCATTTCTTGCACTTGAACCACTACTGAATCAATATTGGCCGGACCTGATAAGCAAAAACAACCGAGGCTTTTGGAGATACGAATGGAATAAACATGGAACATGTTCGGAGTCCGTTTTTAATCAGGTTCAATATTTCCAAACAACTTTGAACATTCGTACCAATCCCAACTACGACCTACTGGCCATTCTGAAAACTGCCAGGCTCATCCCCACCGGCAGCATATCCCACCGATATCATGTCATCGAAGGTGCCATTCGGGCTGCAATAGGAAAGAAACCAGGCCTCCGCTGCAACATCAATAAGAAAACTAGAAACAGTCAATTGCACGAAATCGTATTATGCTTTGATAAAAATGGAGTTACTCTCATAGATTGTCCGTTTCCCCGCAAGTGCCCAACTCAATTTAAGTGGCTCTTGTCTTAA

mRNA sequence

ATGGCTCGTATTCATCTTTTCGTGCTCTTCCTCTCGAGTTTGATCTTGTTTGTGAATGCACAGTTTGAATACTTTCAAATGGTTCAACAATGGCCACTGGCTACATGCACAGGTACCCCGTGCCTTAATCCACCTTCAAACAAGTTTACTATTCACGGTCTTTGGCCGAGCAACTTCTCCAATGCCATACTTGTTTGCAAAGGATCAACATTTAATTCAACCAATACGGCATTTCTTGCACTTGAACCACTACTGAATCAATATTGGCCGGACCTGATAAGCAAAAACAACCGAGGCTTTTGGAGATACGAATGGAATAAACATGGAACATGTTCGGAGTCCGTTTTTAATCAGGTTCAATATTTCCAAACAACTTTGAACATTCGTACCAATCCCAACTACGACCTACTGGCCATTCTGAAAACTGCCAGGCTCATCCCCACCGGCAGCATATCCCACCGATATCATGTCATCGAAGGTGCCATTCGGGCTGCAATAGGAAAGAAACCAGGCCTCCGCTGCAACATCAATAAGAAAACTAGAAACAGTCAATTGCACGAAATCGTATTATGCTTTGATAAAAATGGAGTTACTCTCATAGATTGTCCGTTTCCCCGCAAGTGCCCAACTCAATTTAAGTGGCTCTTGTCTTAA

Coding sequence (CDS)

ATGGCTCGTATTCATCTTTTCGTGCTCTTCCTCTCGAGTTTGATCTTGTTTGTGAATGCACAGTTTGAATACTTTCAAATGGTTCAACAATGGCCACTGGCTACATGCACAGGTACCCCGTGCCTTAATCCACCTTCAAACAAGTTTACTATTCACGGTCTTTGGCCGAGCAACTTCTCCAATGCCATACTTGTTTGCAAAGGATCAACATTTAATTCAACCAATACGGCATTTCTTGCACTTGAACCACTACTGAATCAATATTGGCCGGACCTGATAAGCAAAAACAACCGAGGCTTTTGGAGATACGAATGGAATAAACATGGAACATGTTCGGAGTCCGTTTTTAATCAGGTTCAATATTTCCAAACAACTTTGAACATTCGTACCAATCCCAACTACGACCTACTGGCCATTCTGAAAACTGCCAGGCTCATCCCCACCGGCAGCATATCCCACCGATATCATGTCATCGAAGGTGCCATTCGGGCTGCAATAGGAAAGAAACCAGGCCTCCGCTGCAACATCAATAAGAAAACTAGAAACAGTCAATTGCACGAAATCGTATTATGCTTTGATAAAAATGGAGTTACTCTCATAGATTGTCCGTTTCCCCGCAAGTGCCCAACTCAATTTAAGTGGCTCTTGTCTTAA

Protein sequence

MARIHLFVLFLSSLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPSNKFTIHGLWPSNFSNAILVCKGSTFNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQVQYFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRNSQLHEIVLCFDKNGVTLIDCPFPRKCPTQFKWLLS

Homology

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BLAST of Csor.00g171540 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35
Identity = 77/185 (41.62%), Postives = 107/185 (57.84%), Query Frame = 0


Query: 22  FEYFQMVQQWPLATCT---GTPCLNPPSNKFTIHGLWPSNFSNAILVC-KGSTFNSTNTA 81
           F+ F  VQQWP A C+      C       FTIHGLWP     ++  C +GS F+ T  +
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITKIS 60

Query: 82  FLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQVQYFQTTLNIRTNPNYDLL 141
              L+  LN  WP+++  NN+ FW +EW KHGTCSES FNQ  YF+  +++R   NYD++
Sbjct: 61  H--LQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRN--NYDII 120

Query: 142 AILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRNSQLHEIVLCFDKNGV 201
             L+     P G    R   I+G ++A  GK PGLRC  + +T+ S L ++V CF ++G 
Sbjct: 121 GALRPHAAGPNGRTKSR-QAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGS 180

Query: 202 TLIDC 203
           TLIDC
Sbjct: 181 TLIDC 180

[Close]

BLAST of Csor.00g171540 vs. ExPASy Swiss-Prot
Match: O80324 (Ribonuclease S-6 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-29
Identity = 72/214 (33.64%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 13  SLILFVNAQ----FEYFQMVQQWPLATCTG--TPCLNPPSNKFTIHGLWPSN-FSNAILV 72
           SLI+ ++      + YFQ  QQ+  A C    TPC +PP   FT+HGLWPSN   +  + 
Sbjct: 15  SLIVLISCSSTMGYNYFQFTQQYQPAVCNSNPTPCKDPPDKLFTVHGLWPSNDVGDDPIY 74

Query: 73  CKGSTFNSTNTAFLALEPLLNQYWPDLISKNNR-GFWRYEWNKHGTCSE--SVFNQVQYF 132
           CK  T  S     L  + ++   WP+++ + +  GFW  +WNKHG+C +  ++ +++ YF
Sbjct: 75  CKNKTIKSQQIGNLTAQLII--IWPNVLDRTDHVGFWNRQWNKHGSCGKAPTIKDEMHYF 134

Query: 133 QTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRN 192
           +T + +      ++  IL  A++ P G I  R  +I         KKP L+C  N +T  
Sbjct: 135 KTVIKMYITQKQNVSEILSRAKIEPEGKIRRRDDIINAIRLGTKDKKPKLKCQKNNQT-- 194

Query: 193 SQLHEIVLCFDKNGVTLIDCP------FPRKCPT 211
           ++L EI +C D+N    IDCP       P  CPT
Sbjct: 195 TELVEITICSDRNLTQFIDCPRSSFKGSPFHCPT 224

[Close]

BLAST of Csor.00g171540 vs. ExPASy Swiss-Prot
Match: Q40379 (Ribonuclease S-6 OS=Nicotiana alata OX=4087 PE=1 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 6.4e-29
Identity = 82/213 (38.50%), Postives = 109/213 (51.17%), Query Frame = 0


Query: 6   LFVLFLSSLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPSNKFTIHGLWPSNFSNAILV 65
           +FV+FL +L     A FEY Q+V QWP A C  TPC N PSN FTIHGLWP N S  +  
Sbjct: 9   VFVIFLFALSPIYGA-FEYMQLVLQWPTAFCHTTPCKNIPSN-FTIHGLWPDNVSTTLNF 68

Query: 66  C-KGSTFNSTNTAFLALEPLLNQYWPDLISK-----NNRGFWRYEWNKHGTCSESVFNQV 125
           C K   +N         +  L   WPDLI +       + FWR E+ KHGTC   ++NQV
Sbjct: 69  CGKEDDYNIIMDG--PEKNGLYVRWPDLIREKADCMKTQNFWRREYIKHGTCCSEIYNQV 128

Query: 126 QYFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHV--IEGAIRAAIGKKPGLRCNIN 185
           QYF+  + ++    +DLL  LK   +I      ++Y V  I   I+      P L C   
Sbjct: 129 QYFRLAMALK--DKFDLLTSLKNHGIIR----GYKYTVQKINNTIKTVTKGYPNLSC--- 188

Query: 186 KKTRNSQLHEIVLCFDKNGVTLIDCPFPRKCPT 211
             T+  +L  + +CFD     +IDCP P+ C T
Sbjct: 189 --TKGQELWFVGICFDSTAKNVIDCPNPKTCKT 206

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BLAST of Csor.00g171540 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-28
Identity = 81/205 (39.51%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 22  FEYFQMVQQWPLATC-TGTPCLNPPSNK----FTIHGLWPSNFSNAILV--CKGS-TFNS 81
           F++F  VQQWP + C T   C  P S K    F IHGLWP N+ +      C  S  F+S
Sbjct: 30  FDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWP-NYKDGTYPSNCDASKPFDS 89

Query: 82  TNTAFLALEPLLNQYWPDLISKNNRG--FWRYEWNKHGTCSESVFNQVQYFQTTLNIRTN 141
           +  + L     + + WP L   +  G  FW +EW KHGTCSESV +Q +YFQT LN++  
Sbjct: 90  STISDLLTS--MKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQK 149

Query: 142 PNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRNSQLHEIVLC 201
            N  LL  L  A + P G  S+    I  +I+ +IG  P + CN    + NSQL+++ LC
Sbjct: 150 TN--LLGALTKAGINPDGK-SYSLESIRDSIKESIGFTPWVECN-RDGSGNSQLYQVYLC 209

Query: 202 FDKNGVTLIDCP-FPR-KCPTQFKW 215
            D++G  LI+CP FP  KC  + ++
Sbjct: 210 VDRSGSGLIECPVFPHGKCGAEIEF 227

[Close]

BLAST of Csor.00g171540 vs. ExPASy Swiss-Prot
Match: P93460 (Ribonuclease S-5 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.0e-28
Identity = 81/216 (37.50%), Postives = 108/216 (50.00%), Query Frame = 0


Query: 6   LFVLFLSSLILFVNAQFEYFQMVQQWPLATCTG--TPCLNPPSNKFTIHGLWPSNFSNAI 65
           L VL LSS        ++YFQ  QQ+ LA C    TPC +PP   FT+HGLWPS+ +   
Sbjct: 16  LIVLILSS----STVGYDYFQFTQQYQLAVCNSNRTPCKDPPDKLFTVHGLWPSSMAGP- 75

Query: 66  LVCKGSTFNSTNTAFLALEPLLNQYWPDLISK-NNRGFWRYEWNKHGTCS-ESVFNQVQY 125
                    +       LEP L   WP++  +  N+ FW  EW KHGTC   ++ N+  Y
Sbjct: 76  -DPSNCPIRNIRKREKLLEPQLAIIWPNVFDRTKNKLFWDKEWMKHGTCGYPTIDNENHY 135

Query: 126 FQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIR-AAIGKKPGLRCNINKKT 185
           F+T + +  +   ++  IL  A++ P G        IE AIR  A  KKP L+C   KK 
Sbjct: 136 FETVIKMYISKKQNVSRILSKAKIEPDGK-KRALLDIENAIRNGADNKKPKLKC--QKKG 195

Query: 186 RNSQLHEIVLCFDKNGVTLIDCPF------PRKCPT 211
             ++L EI LC DK+G   IDCP       P  CPT
Sbjct: 196 TTTELVEITLCSDKSGEHFIDCPHPFEPISPHYCPT 222

[Close]

BLAST of Csor.00g171540 vs. NCBI nr
Match: KAG6573572.1 (hypothetical protein SDJN03_27459, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 459 bits (1180), Expect = 3.16e-163
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MARIHLFVLFLSSLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPSNKFTIHGLWPSNFS 60
           MARIHLFVLFLSSLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPSNKFTIHGLWPSNFS
Sbjct: 1   MARIHLFVLFLSSLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPSNKFTIHGLWPSNFS 60

Query: 61  NAILVCKGSTFNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQVQ 120
           NAILVCKGSTFNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQVQ
Sbjct: 61  NAILVCKGSTFNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQVQ 120

Query: 121 YFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKT 180
           YFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKT
Sbjct: 121 YFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKT 180

Query: 181 RNSQLHEIVLCFDKNGVTLIDCPFPRKCPTQFKWLLS 217
           RNSQLHEIVLCFDKNGVTLIDCPFPRKCPTQFKWLLS
Sbjct: 181 RNSQLHEIVLCFDKNGVTLIDCPFPRKCPTQFKWLLS 217

[Close]

BLAST of Csor.00g171540 vs. NCBI nr
Match: XP_023522327.1 (ribonuclease MC-like [Cucurbita pepo subsp. pepo] >XP_023541839.1 ribonuclease MC-like [Cucurbita pepo subsp. pepo] >KAG6573806.1 hypothetical protein SDJN03_27693, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283 bits (725), Expect = 7.12e-94
Identity = 140/219 (63.93%), Postives = 165/219 (75.34%), Query Frame = 0


Query: 1   MARIHLFVLFLSSLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPS-NKFTIHGLWPSNF 60
           MA IHL  + LS+LI  VNAQFE FQMVQQWP ATC   PC   PS  +FTIHGLWP+N+
Sbjct: 1   MAHIHL--ILLSTLIFSVNAQFELFQMVQQWPPATCANFPCAQSPSPTRFTIHGLWPANY 60

Query: 61  SNAILVCKGST-FNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQ 120
           +   LVC+G T F+ T   F ALEPLL  +WP+L   ++  FWR EWNKHG CSE+VF+Q
Sbjct: 61  TKRYLVCRGGTKFSETIQGFAALEPLLTHHWPNLERPDDIDFWRREWNKHGPCSENVFDQ 120

Query: 121 VQYFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINK 180
           VQYFQT LNIRTNP YDLLAILK A+L PTG+ S +Y VI+ AI+AA GKKPGLRCN+NK
Sbjct: 121 VQYFQTALNIRTNPRYDLLAILKAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNK 180

Query: 181 KTRNSQLHEIVLCFDKNGVTLIDCPFPRKCPTQFKWLLS 217
            T+ +QLHEIVLCF K+G TLIDCPF   CP +F + LS
Sbjct: 181 NTKQTQLHEIVLCFHKDGATLIDCPF-ADCPPRFAFYLS 216

[Close]

BLAST of Csor.00g171540 vs. NCBI nr
Match: XP_022945609.1 (ribonuclease MC-like [Cucurbita moschata] >XP_022945610.1 ribonuclease MC-like [Cucurbita moschata] >KAG6573803.1 hypothetical protein SDJN03_27690, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279 bits (714), Expect = 3.36e-92
Identity = 139/219 (63.47%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 1   MARIHLFVLFLSSLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPS-NKFTIHGLWPSNF 60
           MA IHL  + LS+LI  VNAQFE FQMVQQWP ATCT   C   PS  +FTIHGLWP+N+
Sbjct: 1   MAHIHL--ILLSTLIFSVNAQFELFQMVQQWPPATCTNVLCARSPSPTRFTIHGLWPANY 60

Query: 61  SNAILVCKGST-FNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQ 120
           +   LVC+  T F+ T   F ALEPLL  +WP+L    ++ FWR EWNKHG CSE+VFNQ
Sbjct: 61  TKRYLVCRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQ 120

Query: 121 VQYFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINK 180
           VQYFQT LNIRTNP YDLLAIL  A+L PTG+ S +Y VI+ AI+AA GKKPGLRCN+NK
Sbjct: 121 VQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNK 180

Query: 181 KTRNSQLHEIVLCFDKNGVTLIDCPFPRKCPTQFKWLLS 217
            T+ +QLHEIVLCF K+G TLIDCPF   CP +F + LS
Sbjct: 181 NTKQTQLHEIVLCFHKDGATLIDCPF-ADCPPRFAFYLS 216

[Close]

BLAST of Csor.00g171540 vs. NCBI nr
Match: XP_022966939.1 (ribonuclease MC-like [Cucurbita maxima])

HSP 1 Score: 273 bits (699), Expect = 7.85e-90
Identity = 136/223 (60.99%), Postives = 163/223 (73.09%), Query Frame = 0


Query: 1   MARIHLFVLFLS----SLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPS-NKFTIHGLW 60
           MA  HL +L LS    +LI  VNAQFE FQ+VQQWP ATCT   C   P+  +FTIHGLW
Sbjct: 1   MAHTHLILLSLSLSLSTLIFSVNAQFELFQLVQQWPPATCTNVHCGQLPTPTRFTIHGLW 60

Query: 61  PSNFSNAILVCKGST-FNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSES 120
           P+N++   LVC G T F+ T   F AL+P L  YWP+L   +++ FWR EW+KHG CSE+
Sbjct: 61  PANYTKPYLVCSGGTKFSETIQGFSALKPALVYYWPNLKKGSHKSFWRKEWDKHGACSEN 120

Query: 121 VFNQVQYFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRC 180
           VFNQVQYFQT LNIRTNP YDLLAIL  A L PTG+I  +YHVIE AI+AA GKKPGLRC
Sbjct: 121 VFNQVQYFQTALNIRTNPKYDLLAILNAANLGPTGNIFRQYHVIENAIKAATGKKPGLRC 180

Query: 181 NINKKTRNSQLHEIVLCFDKNGVTLIDCPFPRKCPTQFKWLLS 217
           N N+ T+ +QLHEIVLCFDK+G T+IDCPF   CP QF + ++
Sbjct: 181 NTNQNTKQTQLHEIVLCFDKDGATIIDCPFAN-CPKQFVFSIT 222

[Close]

BLAST of Csor.00g171540 vs. NCBI nr
Match: XP_023514499.1 (ribonuclease MC-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270 bits (689), Expect = 1.20e-87
Identity = 131/207 (63.29%), Postives = 152/207 (73.43%), Query Frame = 0


Query: 11  LSSLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPSNKFTIHGLWPSNFSNAILVCKGST 70
           L+ L L V AQF+YFQMVQQWP ATC+G  C   P   FTIHGLWPSN+SN  L+C G  
Sbjct: 13  LALLTLCVKAQFDYFQMVQQWPPATCSGVRCYANPPAMFTIHGLWPSNYSNVPLICTGQP 72

Query: 71  FNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQVQYFQTTLNIRT 130
           FN T      L P LN YWPD+IS NN+ FW++EW+ HGTCS+  FNQ+QYFQTTLNIRT
Sbjct: 73  FNPT------LVPQLNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYFQTTLNIRT 132

Query: 131 NPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRNSQLHEIVL 190
           N NYDLLAIL TA L PTG+ + +Y  IEGAI+AA GKKPGLRCN N +++  QL EI+L
Sbjct: 133 NHNYDLLAILNTAGLGPTGTNTRQYGAIEGAIQAATGKKPGLRCNKNAQSKKKQLFEIIL 192

Query: 191 CFDKNGVTLIDCP--FPRKCPTQFKWL 215
           CFDKNGVTLIDC       CP+QF WL
Sbjct: 193 CFDKNGVTLIDCTQFAGITCPSQFVWL 213

[Close]

BLAST of Csor.00g171540 vs. ExPASy TrEMBL
Match: A0A6J1G1F6 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111449795 PE=3 SV=1)

HSP 1 Score: 279 bits (714), Expect = 1.62e-92
Identity = 139/219 (63.47%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 1   MARIHLFVLFLSSLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPS-NKFTIHGLWPSNF 60
           MA IHL  + LS+LI  VNAQFE FQMVQQWP ATCT   C   PS  +FTIHGLWP+N+
Sbjct: 1   MAHIHL--ILLSTLIFSVNAQFELFQMVQQWPPATCTNVLCARSPSPTRFTIHGLWPANY 60

Query: 61  SNAILVCKGST-FNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQ 120
           +   LVC+  T F+ T   F ALEPLL  +WP+L    ++ FWR EWNKHG CSE+VFNQ
Sbjct: 61  TKRYLVCRQRTKFSETIQGFAALEPLLTYHWPNLKRGKDKTFWRKEWNKHGPCSENVFNQ 120

Query: 121 VQYFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINK 180
           VQYFQT LNIRTNP YDLLAIL  A+L PTG+ S +Y VI+ AI+AA GKKPGLRCN+NK
Sbjct: 121 VQYFQTALNIRTNPRYDLLAILNAAKLGPTGNTSRQYQVIKNAIQAATGKKPGLRCNVNK 180

Query: 181 KTRNSQLHEIVLCFDKNGVTLIDCPFPRKCPTQFKWLLS 217
            T+ +QLHEIVLCF K+G TLIDCPF   CP +F + LS
Sbjct: 181 NTKQTQLHEIVLCFHKDGATLIDCPF-ADCPPRFAFYLS 216

[Close]

BLAST of Csor.00g171540 vs. ExPASy TrEMBL
Match: A0A6J1HV84 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111466502 PE=3 SV=1)

HSP 1 Score: 273 bits (699), Expect = 3.80e-90
Identity = 136/223 (60.99%), Postives = 163/223 (73.09%), Query Frame = 0


Query: 1   MARIHLFVLFLS----SLILFVNAQFEYFQMVQQWPLATCTGTPCLNPPS-NKFTIHGLW 60
           MA  HL +L LS    +LI  VNAQFE FQ+VQQWP ATCT   C   P+  +FTIHGLW
Sbjct: 1   MAHTHLILLSLSLSLSTLIFSVNAQFELFQLVQQWPPATCTNVHCGQLPTPTRFTIHGLW 60

Query: 61  PSNFSNAILVCKGST-FNSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSES 120
           P+N++   LVC G T F+ T   F AL+P L  YWP+L   +++ FWR EW+KHG CSE+
Sbjct: 61  PANYTKPYLVCSGGTKFSETIQGFSALKPALVYYWPNLKKGSHKSFWRKEWDKHGACSEN 120

Query: 121 VFNQVQYFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRC 180
           VFNQVQYFQT LNIRTNP YDLLAIL  A L PTG+I  +YHVIE AI+AA GKKPGLRC
Sbjct: 121 VFNQVQYFQTALNIRTNPKYDLLAILNAANLGPTGNIFRQYHVIENAIKAATGKKPGLRC 180

Query: 181 NINKKTRNSQLHEIVLCFDKNGVTLIDCPFPRKCPTQFKWLLS 217
           N N+ T+ +QLHEIVLCFDK+G T+IDCPF   CP QF + ++
Sbjct: 181 NTNQNTKQTQLHEIVLCFDKDGATIIDCPFAN-CPKQFVFSIT 222

[Close]

BLAST of Csor.00g171540 vs. ExPASy TrEMBL
Match: A0A6J1EXD5 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1)

HSP 1 Score: 266 bits (681), Expect = 9.83e-87
Identity = 128/200 (64.00%), Postives = 147/200 (73.50%), Query Frame = 0


Query: 18  VNAQFEYFQMVQQWPLATCTGTPCLNPPSNKFTIHGLWPSNFSNAILVCKGSTFNSTNTA 77
           V AQF+YFQMVQQWP ATC+G  C   P   FTIHGLWPSN+SN  LVC G  FN    A
Sbjct: 20  VKAQFDYFQMVQQWPPATCSGVRCYANPPAMFTIHGLWPSNYSNVPLVCAGQPFNPAQIA 79

Query: 78  FLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQVQYFQTTLNIRTNPNYDLL 137
              L P LN YWPD+IS NN+ FW++EW+ HGTCS+  FNQ+QYFQTTLNIRTN NYDLL
Sbjct: 80  --TLVPQLNTYWPDVISGNNQRFWKHEWDSHGTCSDPPFNQLQYFQTTLNIRTNHNYDLL 139

Query: 138 AILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRNSQLHEIVLCFDKNGV 197
           AIL TA L PT + + +Y  IEGAI+AA GKKPGLRCN N +++  QL EI+LCFDKNGV
Sbjct: 140 AILNTAGLGPTATNTRQYGAIEGAIQAATGKKPGLRCNKNAQSKKKQLFEIILCFDKNGV 199

Query: 198 TLIDCP--FPRKCPTQFKWL 215
           TLIDC       CP+QF WL
Sbjct: 200 TLIDCTQFAGITCPSQFVWL 217

[Close]

BLAST of Csor.00g171540 vs. ExPASy TrEMBL
Match: A0A6J1IAR7 (Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1)

HSP 1 Score: 261 bits (666), Expect = 2.12e-84
Identity = 124/200 (62.00%), Postives = 146/200 (73.00%), Query Frame = 0


Query: 18  VNAQFEYFQMVQQWPLATCTGTPCLNPPSNKFTIHGLWPSNFSNAILVCKGSTFNSTNTA 77
           V AQF+YFQMVQQWP ATC+G  C   P   FTIHGLWPS +SN   VC G  F+    A
Sbjct: 21  VKAQFDYFQMVQQWPPATCSGVRCYANPPAMFTIHGLWPSTYSNVPPVCAGQPFDRAQIA 80

Query: 78  FLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQVQYFQTTLNIRTNPNYDLL 137
              LEP LN YWPD+I+ NN+ FW++EW+ HGTCS+  FNQ+QYFQTTLNIRTN NYDLL
Sbjct: 81  --TLEPQLNTYWPDVINGNNQRFWKHEWDNHGTCSDPPFNQLQYFQTTLNIRTNHNYDLL 140

Query: 138 AILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRNSQLHEIVLCFDKNGV 197
           AIL TA L PT + + +Y  IEGAI+AA GKKPGLRCN N +++  QL EI+LCFDKNGV
Sbjct: 141 AILNTAGLGPTATTTRQYQAIEGAIQAATGKKPGLRCNKNAQSKRKQLFEIILCFDKNGV 200

Query: 198 TLIDCP--FPRKCPTQFKWL 215
           TLI+C       CP+QF WL
Sbjct: 201 TLINCTQFAGITCPSQFVWL 218

[Close]

BLAST of Csor.00g171540 vs. ExPASy TrEMBL
Match: A0A6J1F837 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1)

HSP 1 Score: 239 bits (609), Expect = 2.56e-76
Identity = 122/206 (59.22%), Postives = 142/206 (68.93%), Query Frame = 0


Query: 14  LILFVNAQFEYFQMVQQWPLATCTGTP--CLNPPSNKFTIHGLWPSNFSNAILVCKGSTF 73
           LIL VNAQF+YFQMVQQWP A C+     C   P   FTIHGLWPSN+SNA LVC    F
Sbjct: 18  LILCVNAQFDYFQMVQQWPPAKCSSVKVRCHVQPPTMFTIHGLWPSNYSNARLVCAPQPF 77

Query: 74  NSTNTAFLALEPLLNQYWPDLISKNNRGFWRYEWNKHGTCSESVFNQVQYFQTTLNIRTN 133
           N T  A  AL P LN YWPD+I   N+ FW++EW++HG CS   FNQ+QYFQ TLNIRTN
Sbjct: 78  NPTQIA--ALRPQLNTYWPDVIQGKNQQFWQHEWDRHGICSNPPFNQLQYFQITLNIRTN 137

Query: 134 PNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRNS-QLHEIVL 193
            +YDLL IL  A L P+ +    Y  IEGAI+AA GKKPGLRCNIN +++   QL EI+L
Sbjct: 138 HSYDLLTILNAAGLGPSDTNIREYKDIEGAIQAATGKKPGLRCNINAQSKEKKQLLEIIL 197

Query: 194 CFDKNGVTLIDCP--FPRKCPTQFKW 214
           CFDK+G+TLIDC       CP QF W
Sbjct: 198 CFDKDGITLIDCTEFAGITCPPQFVW 221

[Close]

BLAST of Csor.00g171540 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-30
Identity = 81/204 (39.71%), Postives = 111/204 (54.41%), Query Frame = 0


Query: 22  FEYFQMVQQWPLATC-TGTPCLNPPSNK----FTIHGLWPS-NFSNAILVC-KGSTFNST 81
           F++F  V QWP A C T   C  P S K    F IHGLWP+ N  +    C   S F+ +
Sbjct: 28  FDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLWPNYNGGSWPSNCDPDSQFDRS 87

Query: 82  NTAFLALEPLLNQYWPDLISKNNRG--FWRYEWNKHGTCSESVFNQVQYFQTTLNIRTNP 141
             + L     L + WP L   +N G  FW +EW KHGTCSESV +Q +YF+  L ++   
Sbjct: 88  QISDLVSS--LKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFENALKLKQKA 147

Query: 142 NYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRNSQLHEIVLCF 201
           N  LL ILK + + P     +    I  AI+  IG  PG+ CN + + RN+QLH+I +C 
Sbjct: 148 N--LLQILKNSGINPDDGF-YNLDKITNAIKDGIGFTPGIECNKDPE-RNAQLHQIYICV 207

Query: 202 DKNGVTLIDCP-FPR-KCPTQFKW 215
           D +G   I+CP  PR  CP+Q ++
Sbjct: 208 DTSGTEFIECPVLPRGSCPSQIQF 225

[Close]

BLAST of Csor.00g171540 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-29
Identity = 81/205 (39.51%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 22  FEYFQMVQQWPLATC-TGTPCLNPPSNK----FTIHGLWPSNFSNAILV--CKGS-TFNS 81
           F++F  VQQWP + C T   C  P S K    F IHGLWP N+ +      C  S  F+S
Sbjct: 30  FDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWP-NYKDGTYPSNCDASKPFDS 89

Query: 82  TNTAFLALEPLLNQYWPDLISKNNRG--FWRYEWNKHGTCSESVFNQVQYFQTTLNIRTN 141
           +  + L     + + WP L   +  G  FW +EW KHGTCSESV +Q +YFQT LN++  
Sbjct: 90  STISDLLTS--MKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQK 149

Query: 142 PNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRNSQLHEIVLC 201
            N  LL  L  A + P G  S+    I  +I+ +IG  P + CN    + NSQL+++ LC
Sbjct: 150 TN--LLGALTKAGINPDGK-SYSLESIRDSIKESIGFTPWVECN-RDGSGNSQLYQVYLC 209

Query: 202 FDKNGVTLIDCP-FPR-KCPTQFKW 215
            D++G  LI+CP FP  KC  + ++
Sbjct: 210 VDRSGSGLIECPVFPHGKCGAEIEF 227

[Close]

BLAST of Csor.00g171540 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 73/211 (34.60%), Postives = 103/211 (48.82%), Query Frame = 0


Query: 3   RIHLFVLFLSSLILFVNAQ-FEYFQMVQQWPLATCTGT-----PCLNPPSNKFTIHGLWP 62
           +  +F+L L  L +   AQ F++F  V QWP A C        P    P+  F IHGLWP
Sbjct: 2   KFFIFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWP 61

Query: 63  SNFSNA-ILVCK-GSTFNSTNTAFLALEPLLNQYWPDLISKNNRG--FWRYEWNKHGTCS 122
           +  +      C   S F+    + L  +  L + WP L   +N G  FW +EW KHGTC+
Sbjct: 62  NYKTGGWPQNCNPDSRFDDLRVSDLMSD--LQREWPTLSCPSNDGMKFWTHEWEKHGTCA 121

Query: 123 ESVFNQVQYFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGL 182
           ES  +Q  YF+  L ++   N  LL  L  A + P     +    IE  I+  +G  PG+
Sbjct: 122 ESELDQHDYFEAGLKLKQKAN--LLHALTNAGIKPDDKF-YEMKDIENTIKQVVGFAPGI 181

Query: 183 RCNINKKTRNSQLHEIVLCFDKNGVTLIDCP 204
            CN    + NSQL++I LC D +    I+CP
Sbjct: 182 ECN-KDSSHNSQLYQIYLCVDTSASKFINCP 206

[Close]

BLAST of Csor.00g171540 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 101.7 bits (252), Expect = 7.7e-22
Identity = 67/223 (30.04%), Postives = 106/223 (47.53%), Query Frame = 0


Query: 8   VLFLSSLILF---VNAQFEYFQMVQQWPLATCTGTPCLNPP-----SNKFTIHGLWP--S 67
           +L L SL++        F +F  V  WP A C       PP     ++ F IHGLWP  +
Sbjct: 9   LLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFIIHGLWPQFN 68

Query: 68  NFSNAILVCKGSTFNSTNTAFLALEPLLNQYWPD----LISKNNRGFWRYEWNKHGTCSE 127
           N +      + + F+ +  + L  +  + + W +        N    W +EWNKHGTC +
Sbjct: 69  NGTWPAFCDQTNLFDISKISDLVCQ--MEKKWTEWGVWACPSNETNLWEHEWNKHGTCVQ 128

Query: 128 SVFNQVQYFQTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLR 187
           S+F+Q  YF+T  N++      LL IL    + P     +    I+ AI+ AIG  PG+ 
Sbjct: 129 SIFDQHSYFRT--NLKFKHKVHLLNILIQKGIKPNDGF-YSLDEIKNAIKCAIGFAPGIE 188

Query: 188 CNINKKTRNSQLHEIVLCFDKNGVTLIDCPF--PRKCPTQFKW 215
           CN + K  N QL +I +C D      ++CP+   + C ++ K+
Sbjct: 189 CNEDVK-GNKQLFQIYICLDNYAKEFVECPYVPDKSCASKIKF 225

[Close]

BLAST of Csor.00g171540 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 82.4 bits (202), Expect = 4.9e-16
Identity = 64/193 (33.16%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 21  QFEYFQMVQQWPLATCTGT-------PCL--NPPSNKFTIHGLWPS-NFSNAILVCKGST 80
           +F+YF +  QWP   C GT        C   +    +FTIHGLWP  N  +    C  S 
Sbjct: 31  EFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYRSD 90

Query: 81  FNSTNTAFLALEPLLNQYWPDLI----SKNNRG---FWRYEWNKHGTCSESVF-NQVQYF 140
           F     +   L   L +YWP L     S  N G   FW +EW KHGTCS  VF ++  YF
Sbjct: 91  FKEKEIS--TLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYF 150

Query: 141 QTTLNIRTNPNYDLLAILKTARLIPTGSISHRYHVIEGAIRAAIGKKPGLRCNINKKTRN 196
            TTLN+    N  +  +L  A  + + S  +    I  AI+ A    P + C      + 
Sbjct: 151 LTTLNLYLKHN--VTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVC------KR 210

The following BLAST results are available for this feature:

BLAST of Csor.00g171540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23540	1.6e-35	41.62	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
O80324	1.3e-29	33.64	Ribonuclease S-6 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1	[more]
Q40379	6.4e-29	38.50	Ribonuclease S-6 OS=Nicotiana alata OX=4087 PE=1 SV=2	[more]
P42813	1.4e-28	39.51	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P93460	7.0e-28	37.50	Ribonuclease S-5 OS=Pyrus pyrifolia OX=3767 PE=1 SV=1	[more]

BLAST of Csor.00g171540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573572.1	3.16e-163	100.00	hypothetical protein SDJN03_27459, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023522327.1	7.12e-94	63.93	ribonuclease MC-like [Cucurbita pepo subsp. pepo] >XP_023541839.1 ribonuclease M...	[more]
XP_022945609.1	3.36e-92	63.47	ribonuclease MC-like [Cucurbita moschata] >XP_022945610.1 ribonuclease MC-like [...	[more]
XP_022966939.1	7.85e-90	60.99	ribonuclease MC-like [Cucurbita maxima]	[more]
XP_023514499.1	1.20e-87	63.29	ribonuclease MC-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g171540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1F6	1.62e-92	63.47	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111449795 PE=3 SV=1	[more]
A0A6J1HV84	3.80e-90	60.99	Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111466502 PE=3 SV=1	[more]
A0A6J1EXD5	9.83e-87	64.00	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111439251 PE=3 SV=1	[more]
A0A6J1IAR7	2.12e-84	62.00	Ribonuclease T(2) OS=Cucurbita maxima OX=3661 GN=LOC111472844 PE=3 SV=1	[more]
A0A6J1F837	2.56e-76	59.22	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111441728 PE=3 SV=1	[more]

BLAST of Csor.00g171540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14220.1	2.0e-30	39.71	Ribonuclease T2 family protein	[more]
AT2G02990.1	1.0e-29	39.51	ribonuclease 1	[more]
AT1G26820.1	1.4e-23	34.60	ribonuclease 3	[more]
AT1G14210.1	7.7e-22	30.04	Ribonuclease T2 family protein	[more]
AT2G39780.1	4.9e-16	33.16	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 22..202 e-value: 5.1E-41 score: 140.8
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 14..207
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 17..215 e-value: 2.1E-53 score: 183.5
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 18..209
None	No IPR available	PANTHER	PTHR11240:SF49	RIBONUCLEASE 3	coord: 14..207
IPR033130	Ribonuclease T2, His active site 2	PROSITE	PS00531	RNASE_T2_2	coord: 100..111
IPR018188	Ribonuclease T2, His active site 1	PROSITE	PS00530	RNASE_T2_1	coord: 49..56
IPR033697	Ribonuclease T2, eukaryotic	CDD	cd01061	RNase_T2_euk	coord: 22..209 e-value: 7.62658E-63 score: 192.162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g171540.m01	Csor.00g171540.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding