Csor.00g169670 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g169670
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Flowering locus T-like 1
Location	Csor_Chr11: 4921346 .. 4923779 (-)
RNA-Seq Expression	Csor.00g169670
Synteny	Csor.00g169670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAGAGACCGTGACCCTTTGGTCGTCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCCATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATCGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTAAATCCTTTGTTTTTACCTTTTCACTGTCTTGGCCATGCATTTTTTTACCCTTTCATTTCACTTTGTTTGCTATAGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTAAGGGAATACTTGCATTGGTACGTCCAATTTTTTTTTTTCTTTTTACCTTTTCACTATAAATTTTTTTACGAGAGGTCATCGTAATATAACCGACAATTTTACACATTAAATATGAAAAAAAAAAAATTTCTACGTCTGGCTTCACTTTTGCATCCTATGATCATTAAAACGCAAACATTTTTTTGATACATATATTTGATCGTTATTAAGAGTTGGTCACATTCTGGCGACCTCGTTGAATAATTTTTCATCATGGGTAATTTCTCTTTTTACTTTCTCGATAAAGGTAACCTATTTTTTTCCCAAAAACCGAATCATTCTTTCTAATAACCAATCAGAATGCTGGTCCATACATACATCTTTACTTGATTGTGACAAATTTTTTTTTATAGATTGAAAGTTTAAATTTTTAATATTAATAATAATTTTTAAACAGTATTATATTTAAAATATGATAAGGTAAAGAATCGAACCATCGATTTTTAGAATGTAAAATAGTGTCTTATCGAATAAGTTATGTTCGAATAGAATCATAGATCTCTCTAGAATTGGAGATTGTCAATGTCCTTTCATAACGAAGTAAAGCCTTGTTCTAAAAATTTAAGAGAATCAAAGTCTAATAATGAATTAAATGGATAGTTTAATGTGGATCCGTCCCGATGTAAATGTATATAATTGTTTCGGTCCAATTTGCAGGTTGGTGACTGATATCCCCGCTACAACGGGAGCGACCTTTGGTATGTTATCTTTATGTTTCTAAACATTTTGTTTATAGAGATGTGTTTGTGTCATCAAATTTATTAAAAGTTTGATAGGTATGCCTCGTAACATTATATATTCCTTACCATTATTAAAGTACTTTGGAAAAGAGATCCCAAAAAAATTAAATTAGCTTTTTCTTCCCGTCAATTTCTAATATCACGGGTATGAAAATTTGAACATCTGGCTTTAAAGCATATCTATGCACACTTTTTCACAATAAATGTGAGATGTCACATCAGTTGGAGAATGAAACGAAACATTTTCTTATAAGGATGTGAAAATCTCTTCCTAGCAGACGCGTTTTAAAATCGTGAGGCTGACAGCGACACGTAACGGGCTAAAGCGGACAATGTCTACTATTGGTGGGCTTGGATTGTTACTAATAGTATCAAAGTCGGTCACCGAACGGTGTGCCAGTGAGGACGTTGGGTCTCAAGGGGAATTTGTGAGTTTCCACCTCAATTGGAGAGGGGAACAAAACATACTTTATAAGAGTGCGGAAACCTCTCTCCAGCAGACGCGTGTTAAAACCATGAGGCTAACGGTGATATGTAACGGGCTAAAATAGACAATATCTACAAGTGGTGGGCTTGGACTGTTACACATGGTATTAAAGCCCGTCACAGAGTGGTGTGTCAACGAGAACATTGGTCTCCAAGGGGAATTTGTGAGATCCCACATCGATTAGAAAGGAGAACGAACCATTCTTTATAAAGGTGTGGAAACCTCTCCCTAGCAGACACATTTTAAAACCGTGAGGCTAACAGCGACACGTAATGGAATAAAGCGAACAATATCTACTAGCAGTGAGTTTAGACTGTTACAAATAGTATCATAGCCCGTCACCAAGCGGTATACCAGCGAGGACGCTGTGTCTCCAAGGGGGGATGGATTATGAGATCCCACCCCAGTTGAAGAGGGAAACGAAACATTCTTTACAAGAGTATAGAAACCTCTCCCCAACAGACGCATTATTCATAAATTCTAATTTCTTCTTTTCTCGAGTTTAATGTCACATGAAAGCATAGGACTTAAACCAACTCCAACATCTTAATTATACATATATTAACTAGTTGAGCTATATTAATCGATTATCGTTTGAACAATGGTAGGCCAAGAGATCGTGTGCTATGAGAGCCCGAGGCCAACGGTGGGTATCCATCGTCTCGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACGAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCCGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAGATGATTTCTAA

mRNA sequence

ATGCCGAGAGACCGTGACCCTTTGGTCGTCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCCATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATCGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTAAGGGAATACTTGCATTGGTTGGTGACTGATATCCCCGCTACAACGGGAGCGACCTTTGGCCAAGAGATCGTGTGCTATGAGAGCCCGAGGCCAACGGTGGGTATCCATCGTCTCGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACGAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCCGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAGATGATTTCTAA

Coding sequence (CDS)

ATGCCGAGAGACCGTGACCCTTTGGTCGTCGGGAGAGTCATCGGCGACGTTATCGACTCGTTCACGAGGTCCATTTCCATTAGGGCTACTTACAACAATAGGGAAATTAGCAATGGGTGTGAGCTCAAACCCTCTCAAGTTGTCAACCAGCCAAGAGTTGAGATCGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCTGATGCTCCTAGCCCTAGTGATCCTAATCTAAGGGAATACTTGCATTGGTTGGTGACTGATATCCCCGCTACAACGGGAGCGACCTTTGGCCAAGAGATCGTGTGCTATGAGAGCCCGAGGCCAACGGTGGGTATCCATCGTCTCGTGCTGGTGTTGTTTCGACAGCTTGGAAGGCAAACGGTGTACGCTCCTGGGTGGCGCCAGAACTTCAACACGAGAGACTTTGCAGAGCTTTACAATCTAGGCTTGCCGGTGGCCGCCGTTTATTTCAATTGCCAAAGGGAAAGTGGGTCTGGTGGAAGGAGAAGAAGCCAAGATGATTTCTAA

Protein sequence

MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF

Homology

[Close]

BLAST of Csor.00g169670 vs. ExPASy Swiss-Prot
Match: Q93WI9 (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 6.8e-85
Identity = 139/171 (81.29%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 3   RDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRT 62
           RDRDPLVVGRV+GDV+D+F RS +++ TY ++ +SNGCELKPS V +QPRVE+GG D+RT
Sbjct: 6   RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRT 65

Query: 63  FFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLV 122
           F+TLVMVDPDAPSPSDPNLREYLHWLVTDIP TT A+FGQE++CYESPRPT+GIHRLV V
Sbjct: 66  FYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFV 125

Query: 123 LFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           LF+QLGRQTVYAPGWRQNFNT+DFAELYNLG PVAAVYFNCQRE+GSGGRR
Sbjct: 126 LFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176

[Close]

BLAST of Csor.00g169670 vs. ExPASy Swiss-Prot
Match: Q9SXZ2 (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2)

HSP 1 Score: 297.0 bits (759), Expect = 1.5e-79
Identity = 131/169 (77.51%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPL+V RV+GDV+D F RSI+++ TY  RE++NG +L+PSQV N+PRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS+P+LREYLHWLVTDIPATTG TFG EIVCYE+P PT GIHR+V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           RQLGRQTVYAPGWRQNFNTR+FAE+YNLGLPVAAV++NCQRESG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of Csor.00g169670 vs. ExPASy Swiss-Prot
Match: Q8VWH2 (Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT1 PE=1 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.2e-79
Identity = 132/168 (78.57%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 6   DPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFT 65
           DPLVVGR++GDV+D F R  ++  +Y  R +SNGCELKPS V  QPRV +GG D+RTF+T
Sbjct: 8   DPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMRTFYT 67

Query: 66  LVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLFR 125
           LVMVDPDAPSPS+PNLREYLHWLVTDIP TTGATFGQE++CYESPRPT+GIHRLV VLF+
Sbjct: 68  LVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLFQ 127

Query: 126 QLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           QLGRQTVYAPGWRQNF+TR+FAELYNLG PVA VYFNCQRE+GSGGRR
Sbjct: 128 QLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRR 175

[Close]

BLAST of Csor.00g169670 vs. ExPASy Swiss-Prot
Match: Q9S7R5 (Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.0e-77
Identity = 129/169 (76.33%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPLVVG V+GDV+D FTR +S++ TY +RE++NG +L+PSQV+N+P VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS+P+ REYLHWLVTDIPATTG  FG E+VCYESPRP  GIHR+VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           RQLGRQTVYAPGWRQ FNTR+FAE+YNLGLPVAA YFNCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of Csor.00g169670 vs. ExPASy Swiss-Prot
Match: Q9FIT4 (Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana OX=3702 GN=BFT PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 8.6e-56
Identity = 106/176 (60.23%), Postives = 135/176 (76.70%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTD 60
           M R+ +PL+VGRVIGDV++ F  S+++R T+N N  +SNG EL PS ++++PRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  LRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRL 120
           LR+FFTL+M+DPDAPSPS+P +REYLHW+VTDIP TT A+FG+EIV YE+P+P  GIHR 
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VLVLFRQLGRQTV-YAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 175
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE+    RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAP--RRR 174

[Close]

BLAST of Csor.00g169670 vs. NCBI nr
Match: XP_023520641.1 (protein HEADING DATE 3A [Cucurbita pepo subsp. pepo] >KAG6588265.1 Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022184.1 Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374 bits (961), Expect = 4.28e-131
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of Csor.00g169670 vs. NCBI nr
Match: ABR20499.1 (FTL2 [Cucurbita moschata])

HSP 1 Score: 374 bits (960), Expect = 6.07e-131
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of Csor.00g169670 vs. NCBI nr
Match: XP_022933924.1 (protein HEADING DATE 3A [Cucurbita moschata])

HSP 1 Score: 372 bits (955), Expect = 4.35e-130
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQ+DF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 179

[Close]

BLAST of Csor.00g169670 vs. NCBI nr
Match: XP_022973471.1 (protein HEADING DATE 3A [Cucurbita maxima] >ABI94606.1 flowering locus T-like 2 [Cucurbita maxima])

HSP 1 Score: 370 bits (950), Expect = 2.04e-129
Identity = 176/179 (98.32%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDVIDSFT+SISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTKSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGA FGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR+QDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRTQDDF 179

[Close]

BLAST of Csor.00g169670 vs. NCBI nr
Match: XP_022149957.1 (protein HEADING DATE 3A [Momordica charantia])

HSP 1 Score: 358 bits (920), Expect = 7.66e-125
Identity = 168/179 (93.85%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+DSF+RSISIR TY++RE++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDSFSRSISIRVTYSSREVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGA FGQEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Csor.00g169670 vs. ExPASy TrEMBL
Match: A6YE10 (FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1)

HSP 1 Score: 374 bits (960), Expect = 2.94e-131
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179

[Close]

BLAST of Csor.00g169670 vs. ExPASy TrEMBL
Match: A0A6J1F141 (protein HEADING DATE 3A OS=Cucurbita moschata OX=3662 GN=LOC111441191 PE=3 SV=1)

HSP 1 Score: 372 bits (955), Expect = 2.11e-130
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLV+GRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQ+DF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQNDF 179

[Close]

BLAST of Csor.00g169670 vs. ExPASy TrEMBL
Match: A6XN27 (Flowering locus T-like 2 OS=Cucurbita maxima OX=3661 GN=FTL2 PE=2 SV=1)

HSP 1 Score: 370 bits (950), Expect = 9.86e-130
Identity = 176/179 (98.32%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDVIDSFT+SISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFTKSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGA FGQEIVCYESPRPTVGIHRLV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR+QDDF
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRTQDDF 179

[Close]

BLAST of Csor.00g169670 vs. ExPASy TrEMBL
Match: A0A6J1D9F0 (protein HEADING DATE 3A OS=Momordica charantia OX=3673 GN=LOC111018250 PE=3 SV=1)

HSP 1 Score: 358 bits (920), Expect = 3.71e-125
Identity = 168/179 (93.85%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+DSF+RSISIR TY++RE++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDSFSRSISIRVTYSSREVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGA FGQEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Csor.00g169670 vs. ExPASy TrEMBL
Match: B9ZYL0 (FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1)

HSP 1 Score: 357 bits (916), Expect = 1.51e-124
Identity = 167/179 (93.30%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60
           MPRDRDPLVVGRVIGDV+D F+RSISIR TY+ +E++NGCELKPSQVVNQPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDDF 179
           LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR QDD+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDDY 179

[Close]

BLAST of Csor.00g169670 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-80
Identity = 131/169 (77.51%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPL+V RV+GDV+D F RSI+++ TY  RE++NG +L+PSQV N+PRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS+P+LREYLHWLVTDIPATTG TFG EIVCYE+P PT GIHR+V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           RQLGRQTVYAPGWRQNFNTR+FAE+YNLGLPVAAV++NCQRESG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of Csor.00g169670 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 288.9 bits (738), Expect = 2.8e-78
Identity = 129/169 (76.33%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 5   RDPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFF 64
           RDPLVVG V+GDV+D FTR +S++ TY +RE++NG +L+PSQV+N+P VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 124
           TLVMVDPD PSPS+P+ REYLHWLVTDIPATTG  FG E+VCYESPRP  GIHR+VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRR 174
           RQLGRQTVYAPGWRQ FNTR+FAE+YNLGLPVAA YFNCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of Csor.00g169670 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 218.0 bits (554), Expect = 6.1e-57
Identity = 106/176 (60.23%), Postives = 135/176 (76.70%), Query Frame = 0


Query: 1   MPRDRDPLVVGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTD 60
           M R+ +PL+VGRVIGDV++ F  S+++R T+N N  +SNG EL PS ++++PRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  LRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRL 120
           LR+FFTL+M+DPDAPSPS+P +REYLHW+VTDIP TT A+FG+EIV YE+P+P  GIHR 
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VLVLFRQLGRQTV-YAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 175
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE+    RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAP--RRR 174

[Close]

BLAST of Csor.00g169670 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 214.5 bits (545), Expect = 6.8e-56
Identity = 100/169 (59.17%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 6   DPLVVGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDLRTFFT 65
           +PL++GRV+GDV+D FT +  +  +YN +++SNG EL PS V ++PRVEI G DLR+FFT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 66  LVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLFR 125
           LVM+DPD P PSDP L+E+LHW+VT+IP TT ATFG+E+V YE PRP++GIHR V VLFR
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query: 126 QLGRQTVY--APGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGR 173
           Q  R+ ++   P  R +FNTR FA  Y+LGLPVAAV+FN QRE+ +  R
Sbjct: 130 QKQRRVIFPNIPS-RDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of Csor.00g169670 vs. TAIR 10
Match: AT2G27550.1 (centroradialis )

HSP 1 Score: 209.5 bits (532), Expect = 2.2e-54
Identity = 99/171 (57.89%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 6   DPLVVGRVIGDVIDSFTRSISIRATYN-NREISNGCELKPSQVVNQPRVEIGGTDLRTFF 65
           DPL+VGRVIGDV+D+  +++ +  TYN ++++ NG EL PS V  +P+VE+ G D+R+FF
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 66  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLVLVLF 125
           TLVM DPD P PSDP LRE+LHW+VTDIP TT  +FG+EI+ YE PRP +GIHR V +LF
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 126 RQLGRQTVYA-PGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 175
           +Q  R +V + P +R  FNTR+FA   +LGLPVAAV+FNCQRE+ +  RRR
Sbjct: 127 KQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAA--RRR 175

The following BLAST results are available for this feature:

BLAST of Csor.00g169670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WI9	6.8e-85	81.29	Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV...	[more]
Q9SXZ2	1.5e-79	77.51	Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2	[more]
Q8VWH2	3.2e-79	78.57	Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT...	[more]
Q9S7R5	4.0e-77	76.33	Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1	[more]
Q9FIT4	8.6e-56	60.23	Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana OX=3702 GN=BFT PE=3 SV=1	[more]

BLAST of Csor.00g169670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520641.1	4.28e-131	100.00	protein HEADING DATE 3A [Cucurbita pepo subsp. pepo] >KAG6588265.1 Protein HEADI...	[more]
ABR20499.1	6.07e-131	99.44	FTL2 [Cucurbita moschata]	[more]
XP_022933924.1	4.35e-130	98.88	protein HEADING DATE 3A [Cucurbita moschata]	[more]
XP_022973471.1	2.04e-129	98.32	protein HEADING DATE 3A [Cucurbita maxima] >ABI94606.1 flowering locus T-like 2 ...	[more]
XP_022149957.1	7.66e-125	93.85	protein HEADING DATE 3A [Momordica charantia]	[more]

BLAST of Csor.00g169670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A6YE10	2.94e-131	99.44	FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1	[more]
A0A6J1F141	2.11e-130	98.88	protein HEADING DATE 3A OS=Cucurbita moschata OX=3662 GN=LOC111441191 PE=3 SV=1	[more]
A6XN27	9.86e-130	98.32	Flowering locus T-like 2 OS=Cucurbita maxima OX=3661 GN=FTL2 PE=2 SV=1	[more]
A0A6J1D9F0	3.71e-125	93.85	protein HEADING DATE 3A OS=Momordica charantia OX=3673 GN=LOC111018250 PE=3 SV=1	[more]
B9ZYL0	1.51e-124	93.30	FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1	[more]

BLAST of Csor.00g169670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65480.1	1.0e-80	77.51	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	2.8e-78	76.33	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	6.1e-57	60.23	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G03840.1	6.8e-56	59.17	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT2G27550.1	2.2e-54	57.89	centroradialis	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 3..170 e-value: 5.1E-59 score: 200.9
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 12..166
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 51..160 e-value: 9.4E-13 score: 48.6
None	No IPR available	PANTHER	PTHR11362:SF125	PROTEIN, PUTATIVE-RELATED	coord: 4..173
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 4..173
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	CDD	cd00866	PEBP_euk	coord: 27..163 e-value: 8.13694E-45 score: 143.283
IPR001858	Phosphatidylethanolamine-binding, conserved site	PROSITE	PS01220	PBP	coord: 64..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g169670.m01	Csor.00g169670.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm