Csor.00g167960 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g167960
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionHistone-lysine n-methyltransferase
LocationCsor_Chr05: 947848 .. 948159 (+)
RNA-Seq ExpressionCsor.00g167960
SyntenyCsor.00g167960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTATGTCACCTCACCCTTGTTCTGTCGAGAACAGCATCGCTGGAGCTCAAGAGGAGGCGGAGATGGAGATGGAGACGGAGGCAGCGGCGGTGGGCCCAGATGTGACGAGGCATATTATGGTGAAGTCTTCCCGCTCCACCCAAGTCAGTTTGGAGAAAGCGGTGGTGCTGCGACGGATCCGGCATCGGAAGCGTGTTAACAAGTTCCAGGCGGTGGTTGGAGCTTTGTTCAGCTCACCGTTCGCCGACAAAGCCGACGAGACACGTCAGAGAAAATGGGTGGACGAACCCTTCACTTCACTCTAA

mRNA sequence

ATGGCGGCTATGTCACCTCACCCTTGTTCTGTCGAGAACAGCATCGCTGGAGCTCAAGAGGAGGCGGAGATGGAGATGGAGACGGAGGCAGCGGCGGTGGGCCCAGATGTGACGAGGCATATTATGGTGAAGTCTTCCCGCTCCACCCAAGTCAGTTTGGAGAAAGCGGTGGTGCTGCGACGGATCCGGCATCGGAAGCGTGTTAACAAGTTCCAGGCGGTGGTTGGAGCTTTGTTCAGCTCACCGTTCGCCGACAAAGCCGACGAGACACGTCAGAGAAAATGGGTGGACGAACCCTTCACTTCACTCTAA

Coding sequence (CDS)

ATGGCGGCTATGTCACCTCACCCTTGTTCTGTCGAGAACAGCATCGCTGGAGCTCAAGAGGAGGCGGAGATGGAGATGGAGACGGAGGCAGCGGCGGTGGGCCCAGATGTGACGAGGCATATTATGGTGAAGTCTTCCCGCTCCACCCAAGTCAGTTTGGAGAAAGCGGTGGTGCTGCGACGGATCCGGCATCGGAAGCGTGTTAACAAGTTCCAGGCGGTGGTTGGAGCTTTGTTCAGCTCACCGTTCGCCGACAAAGCCGACGAGACACGTCAGAGAAAATGGGTGGACGAACCCTTCACTTCACTCTAA

Protein sequence

MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLRRIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL
Homology
BLAST of Csor.00g167960 vs. NCBI nr
Match: KAG6598407.1 (hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197 bits (502), Expect = 1.47e-63
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLR 60
           MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLR
Sbjct: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLR 60

Query: 61  RIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103
           RIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL
Sbjct: 61  RIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103

BLAST of Csor.00g167960 vs. NCBI nr
Match: KAG7029360.1 (Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169 bits (428), Expect = 1.56e-46
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0

Query: 1  MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLR 60
          MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLR
Sbjct: 1  MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLR 60

Query: 61 RIRHRKRVNKFQAVVGALFSSPFADKADET 90
          RIRHRKRVNKFQAVVGALFSSPFADKADET
Sbjct: 61 RIRHRKRVNKFQAVVGALFSSPFADKADET 90

BLAST of Csor.00g167960 vs. NCBI nr
Match: KAA0065270.1 (hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa])

HSP 1 Score: 131 bits (329), Expect = 3.51e-37
Identity = 75/104 (72.12%), Postives = 83/104 (79.81%), Query Frame = 0

Query: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRS-TQVSLEKAVVL 60
           MAAMSP P SVE  I G Q EAE+E E  +AA+GP VTRHI+VKSS S +  +LEKAVVL
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEV-SAALGPAVTRHIVVKSSPSHSNQALEKAVVL 60

Query: 61  RRIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103
           RRIR RKRVNK +A VGALFSSPF DK +ET QRKWVDEPFTSL
Sbjct: 61  RRIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of Csor.00g167960 vs. NCBI nr
Match: KAG6585633.1 (hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020540.1 hypothetical protein SDJN02_17225, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120 bits (300), Expect = 7.01e-33
Identity = 72/103 (69.90%), Postives = 77/103 (74.76%), Query Frame = 0

Query: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLR 60
           MAA+SPH   V     G QE+ +   +   AA  PDVTRHI +KSS STQV LEKAVVLR
Sbjct: 1   MAAVSPHSYPV-----GDQEKDKTVAD---AAASPDVTRHIRLKSSHSTQV-LEKAVVLR 60

Query: 61  RIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103
           RIR RKRVNKFQAVVGALFSSPF DK  E RQRKWVDEPFTSL
Sbjct: 61  RIRQRKRVNKFQAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94

BLAST of Csor.00g167960 vs. NCBI nr
Match: KGN62559.1 (hypothetical protein Csa_022598 [Cucumis sativus])

HSP 1 Score: 120 bits (300), Expect = 1.09e-32
Identity = 74/113 (65.49%), Postives = 82/113 (72.57%), Query Frame = 0

Query: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAA-----AVGPDVTRHIMVKSSRSTQV---- 60
           MAAMSP P SVE  IAG Q EAE+E E+ AA     A+GP VTRHI+VKSS S+      
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  -SLEKAVVLRRIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103
            +LEKAVVLRRIR RKRVNK +A VGALFSSPF DK +    RKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE----RKWVDEPFTSL 109

BLAST of Csor.00g167960 vs. ExPASy TrEMBL
Match: A0A5A7VDJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006120 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 1.70e-37
Identity = 75/104 (72.12%), Postives = 83/104 (79.81%), Query Frame = 0

Query: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRS-TQVSLEKAVVL 60
           MAAMSP P SVE  I G Q EAE+E E  +AA+GP VTRHI+VKSS S +  +LEKAVVL
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEV-SAALGPAVTRHIVVKSSPSHSNQALEKAVVL 60

Query: 61  RRIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103
           RRIR RKRVNK +A VGALFSSPF DK +ET QRKWVDEPFTSL
Sbjct: 61  RRIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of Csor.00g167960 vs. ExPASy TrEMBL
Match: A0A0A0LNJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 5.28e-33
Identity = 74/113 (65.49%), Postives = 82/113 (72.57%), Query Frame = 0

Query: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAA-----AVGPDVTRHIMVKSSRSTQV---- 60
           MAAMSP P SVE  IAG Q EAE+E E+ AA     A+GP VTRHI+VKSS S+      
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  -SLEKAVVLRRIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103
            +LEKAVVLRRIR RKRVNK +A VGALFSSPF DK +    RKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE----RKWVDEPFTSL 109

BLAST of Csor.00g167960 vs. ExPASy TrEMBL
Match: A0A6P5MGE6 (uncharacterized protein LOC110274446 OS=Arachis duranensis OX=130453 GN=LOC110274446 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 8.83e-13
Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 0

Query: 4   MSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQV-SLEKAVVLRRI 63
           MS +   VE S    ++EAE E E       P VT  + +K S + +  +++K VVLRRI
Sbjct: 1   MSSNDKKVEVSKGREEDEAEFEKEESV----PTVTSKLFLKPSENQKPGNMDKEVVLRRI 60

Query: 64  RHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103
           RHR+RVNK +A VG+ FSSPF+        RKWVD+PF +L
Sbjct: 61  RHRRRVNKVRAAVGSFFSSPFSTD----HHRKWVDDPFAAL 93

BLAST of Csor.00g167960 vs. ExPASy TrEMBL
Match: A0A2N9G0R5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.24e-11
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0

Query: 37  VTRHIMVKSSRSTQVSLEKAVVLRRIRHRKRVNKFQAVVGALFSSPFADKADET--RQRK 96
           VT H+ +K + STQ  L+K VVLRRIR RKRVNK +A   AL SSPF+ K D+    ++K
Sbjct: 38  VTSHLYIKPTHSTQ-PLDKEVVLRRIRQRKRVNKVKATFQALVSSPFSAKPDKVSVHKKK 97

Query: 97  WVDEPFTSL 103
           W D+ F +L
Sbjct: 98  WADDAFAAL 105

BLAST of Csor.00g167960 vs. ExPASy TrEMBL
Match: A0A7N2KSH1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.76e-10
Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 0

Query: 37  VTRHIMVKSSRSTQVSLEKAVVLRRIRHRKRVNKFQAVVGALFSSPFA---DKADETRQR 96
           VT H+ +K + STQ +L+K VVLRRIR RKRVNK++A+V AL SS F+   +KA     +
Sbjct: 38  VTSHLYIKPTDSTQ-TLDKEVVLRRIRQRKRVNKWKAMVQALVSSAFSAKPEKAVSVHGK 97

Query: 97  KWVDEPFTS 102
           KW+D+ F +
Sbjct: 98  KWIDDAFAA 105

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6598407.11.47e-63100.00hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7029360.11.56e-46100.00Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. ... [more]
KAA0065270.13.51e-3772.12hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa][more]
KAG6585633.17.01e-3369.90hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN62559.11.09e-3265.49hypothetical protein Csa_022598 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5A7VDJ51.70e-3772.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LNJ05.28e-3365.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1[more]
A0A6P5MGE68.83e-1344.55uncharacterized protein LOC110274446 OS=Arachis duranensis OX=130453 GN=LOC11027... [more]
A0A2N9G0R53.24e-1152.17Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1[more]
A0A7N2KSH13.76e-1050.72Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR35324:SF4BNAA08G03750D PROTEINcoord: 13..103
NoneNo IPR availablePANTHERPTHR35324BNAA08G03750D PROTEINcoord: 13..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g167960.m01Csor.00g167960.m01mRNA