Csor.00g167070 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g167070
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Growth-regulating factor
Location	Csor_Chr05: 558380 .. 558967 (-)
RNA-Seq Expression	Csor.00g167070
Synteny	Csor.00g167070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTACAGAGGTTACAATCCGTCAGAGGGCATCAGTAGTACTCAAGAGGCAGCCGAAACCCAACATTCTCTTCGTCAATTCTTCAACAATTGGCCCAAGAACCAATCTGACAGCTCTTCAGTTTCTTGGTCTAACTCGAATCTGGATTTGCAATCCGACAGGACTCAGTTATCTATATCCATCCCAATGGCTACTTCGGATTTCAGATCCTCAACTTCATCCCCAGCAAACGAGAAAGTCACTCTTTCACCCTTGAAGTCGTTGCAGGAGATGGACCCTCTTCAAATGGGATTGGGAGTGGGGAATGTAATGGATGAACCAAACAACAGGCAGGCAAATTGGATCCCCATCTCGTGGGAGAGCTCCATGGGCGGTCCCCTTGGAGAGGTTCTTCATAGCACAAACAACATCGGCGGGGAATTGAAGAGCTCGTCGAATACTCAACCTGATGACAGAAGGGTGGGACAACAACAGTCCATCGCTAGGGTCGTCCCCCACCGGGGTTCTCCAGAAGACGGCATTTGGTTCATTCTCAAACAGCAGCACAGGGAGCAGCCCAAGAACAGAGAACAACAAGACTCATGA

mRNA sequence

ATGAACTACAGAGGTTACAATCCGTCAGAGGGCATCAGTAGTACTCAAGAGGCAGCCGAAACCCAACATTCTCTTCGTCAATTCTTCAACAATTGGCCCAAGAACCAATCTGACAGCTCTTCAGTTTCTTGGTCTAACTCGAATCTGGATTTGCAATCCGACAGGACTCAGTTATCTATATCCATCCCAATGGCTACTTCGGATTTCAGATCCTCAACTTCATCCCCAGCAAACGAGAAAGTCACTCTTTCACCCTTGAAGTCGTTGCAGGAGATGGACCCTCTTCAAATGGGATTGGGAGTGGGGAATGTAATGGATGAACCAAACAACAGGCAGGCAAATTGGATCCCCATCTCGTGGGAGAGCTCCATGGGCGGTCCCCTTGGAGAGGTTCTTCATAGCACAAACAACATCGGCGGGGAATTGAAGAGCTCGTCGAATACTCAACCTGATGACAGAAGGGTGGGACAACAACAGTCCATCGCTAGGGTCGTCCCCCACCGGGGTTCTCCAGAAGACGGCATTTGGTTCATTCTCAAACAGCAGCACAGGGAGCAGCCCAAGAACAGAGAACAACAAGACTCATGA

Coding sequence (CDS)

ATGAACTACAGAGGTTACAATCCGTCAGAGGGCATCAGTAGTACTCAAGAGGCAGCCGAAACCCAACATTCTCTTCGTCAATTCTTCAACAATTGGCCCAAGAACCAATCTGACAGCTCTTCAGTTTCTTGGTCTAACTCGAATCTGGATTTGCAATCCGACAGGACTCAGTTATCTATATCCATCCCAATGGCTACTTCGGATTTCAGATCCTCAACTTCATCCCCAGCAAACGAGAAAGTCACTCTTTCACCCTTGAAGTCGTTGCAGGAGATGGACCCTCTTCAAATGGGATTGGGAGTGGGGAATGTAATGGATGAACCAAACAACAGGCAGGCAAATTGGATCCCCATCTCGTGGGAGAGCTCCATGGGCGGTCCCCTTGGAGAGGTTCTTCATAGCACAAACAACATCGGCGGGGAATTGAAGAGCTCGTCGAATACTCAACCTGATGACAGAAGGGTGGGACAACAACAGTCCATCGCTAGGGTCGTCCCCCACCGGGGTTCTCCAGAAGACGGCATTTGGTTCATTCTCAAACAGCAGCACAGGGAGCAGCCCAAGAACAGAGAACAACAAGACTCATGA

Protein sequence

MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSISIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISWESSMGGPLGEVLHSTNNIGGELKSSSNTQPDDRRVGQQQSIARVVPHRGSPEDGIWFILKQQHREQPKNREQQDS

Homology

[Close]

BLAST of Csor.00g167070 vs. ExPASy Swiss-Prot
Match: Q6AWY3 (Growth-regulating factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF6 PE=2 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-18
Identity = 55/130 (42.31%), Postives = 83/130 (63.85%), Query Frame = 0


Query: 9   SEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSISIPMATSD 68
           S+ ++  Q +   QH     F +WP+  +   +++W ++  D+Q+ R+QLSIS PMA+SD
Sbjct: 405 SQSLNEQQSSVSLQH-----FVDWPRTPA-QGALAWPDAE-DMQAQRSQLSISAPMASSD 464

Query: 69  FRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISWESSMGGPL 128
             S+++SP +EK+ LSPLK  +E  P+  GLG     DE N  +ANW+P+  +S MGGPL
Sbjct: 465 LSSASTSPIHEKLMLSPLKLSREYSPI--GLGFAANRDEVNQGEANWMPMFRDSLMGGPL 524

Query: 129 GEVLHSTNNI 139
           GEVL   NN+
Sbjct: 525 GEVLTKNNNM 525

[Close]

BLAST of Csor.00g167070 vs. ExPASy Swiss-Prot
Match: O81001 (Growth-regulating factor 1 OS=Arabidopsis thaliana OX=3702 GN=GRF1 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.6e-16
Identity = 55/113 (48.67%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 29  FNNWPKNQSDSSSV-SWSNSNLDLQSDRTQLSISIPMATSDFRSSTSSPANEKVTLSPLK 88
           F N  K+  + ++V SW     +L+SD TQLS+SIPMA        SSP  +K+ LSPL+
Sbjct: 368 FGNQAKHAGNHNNVDSWPE---ELKSDWTQLSMSIPMA-------PSSPVQDKLALSPLR 427

Query: 89  SLQEMDP-LQMGLGVGNVMDEPNNRQANWIPISW--ESSMGGPLGEVLHSTNN 138
             +E DP + MGLGV     +P  +  NWIPISW   +SMGGPLGEVL+ST N
Sbjct: 428 LSREFDPAIHMGLGVNTEFLDPGKKTNNWIPISWGNNNSMGGPLGEVLNSTTN 470

[Close]

BLAST of Csor.00g167070 vs. ExPASy Swiss-Prot
Match: Q8L8A8 (Growth-regulating factor 2 OS=Arabidopsis thaliana OX=3702 GN=GRF2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-13
Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 5   GYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSISIPM 64
           G+  S+ + +   A     S   F +N  K+  + +  SW     +L SD TQLS+SIP+
Sbjct: 362 GHISSDSLLNPNTAKTYGSSFLDFSSNQEKHSGNHNHNSWPE---ELTSDWTQLSMSIPI 421

Query: 65  ATSDFRSS-TSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQAN-WIPISWES 124
           A+S   S+  ++ A EK TLSPL+  +E+D   + +       EP  ++ N WIPISW +
Sbjct: 422 ASSSPSSTHNNNNAQEKTTLSPLRLSRELD---LSIQTDETTIEPTVKKVNTWIPISWGN 481

Query: 125 SMGGPLGEVLHSTNN 138
           S+GGPLGEVL+ST N
Sbjct: 482 SLGGPLGEVLNSTTN 490

[Close]

BLAST of Csor.00g167070 vs. ExPASy Swiss-Prot
Match: Q6AWY2 (Growth-regulating factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF7 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05
Identity = 37/100 (37.00%), Postives = 49/100 (49.00%), Query Frame = 0


Query: 51  LQSDRTQLSISIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNN 110
           +Q D  QLSISIP+  SD       P N              +  QM   VG   +  NN
Sbjct: 272 IQHDDIQLSISIPVDNSDL------PTN-------------YNKAQMDHVVGGSSNGGNN 331

Query: 111 RQANWIPISWESSMGGPLGEVLHSTNNIGGELKSSSNTQP 151
            +A+WIP SWE+S+GGPLGE   +T++   + K  S   P
Sbjct: 332 TRASWIPGSWEASIGGPLGEFFTNTSSASDD-KGKSRHPP 351

[Close]

BLAST of Csor.00g167070 vs. NCBI nr
Match: KAG6598319.1 (Growth-regulating factor 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386 bits (992), Expect = 2.72e-135
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI
Sbjct: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW
Sbjct: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSSNTQPDDRRVGQQQSIARVVPHRGSPEDGIWFILK 180
           ESSMGGPLGEVLHSTNNIGGELKSSSNTQPDDRRVGQQQSIARVVPHRGSPEDGIWFILK
Sbjct: 121 ESSMGGPLGEVLHSTNNIGGELKSSSNTQPDDRRVGQQQSIARVVPHRGSPEDGIWFILK 180

Query: 181 QQHREQPKNREQQDS 195
           QQHREQPKNREQQDS
Sbjct: 181 QQHREQPKNREQQDS 195

[Close]

BLAST of Csor.00g167070 vs. NCBI nr
Match: XP_023547102.1 (growth-regulating factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285 bits (730), Expect = 1.52e-89
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI
Sbjct: 429 MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 488

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW
Sbjct: 489 SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 548

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSS 146
           ESSMGGPLGEVLHSTNNIGGELKSSS
Sbjct: 549 ESSMGGPLGEVLHSTNNIGGELKSSS 574

[Close]

BLAST of Csor.00g167070 vs. NCBI nr
Match: XP_022962461.1 (growth-regulating factor 1-like [Cucurbita moschata])

HSP 1 Score: 280 bits (717), Expect = 1.17e-87
Identity = 144/146 (98.63%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRGYN SEGISST EAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI
Sbjct: 428 MNYRGYNSSEGISSTHEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 487

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW
Sbjct: 488 SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 547

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSS 146
           ESSMGGPLGEVLHSTNNIGGELKSSS
Sbjct: 548 ESSMGGPLGEVLHSTNNIGGELKSSS 573

[Close]

BLAST of Csor.00g167070 vs. NCBI nr
Match: KAG7029290.1 (Growth-regulating factor 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 279 bits (713), Expect = 7.40e-87
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI
Sbjct: 459 MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 518

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW
Sbjct: 519 SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 578

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSS 146
           ESSMGGPLGEVLHSTN IGGELKSSS
Sbjct: 579 ESSMGGPLGEVLHSTN-IGGELKSSS 603

[Close]

BLAST of Csor.00g167070 vs. NCBI nr
Match: XP_022997005.1 (growth-regulating factor 1-like [Cucurbita maxima])

HSP 1 Score: 278 bits (710), Expect = 1.38e-86
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRGYNPSEGISSTQEAAETQHS+RQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI
Sbjct: 429 MNYRGYNPSEGISSTQEAAETQHSVRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 488

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPN+RQ NWIPISW
Sbjct: 489 SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNSRQTNWIPISW 548

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSS 146
           ESSMGGPLGEVL STNNIGGELKSSS
Sbjct: 549 ESSMGGPLGEVLQSTNNIGGELKSSS 574

[Close]

BLAST of Csor.00g167070 vs. ExPASy TrEMBL
Match: A0A6J1HD91 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111462890 PE=3 SV=1)

HSP 1 Score: 280 bits (717), Expect = 5.66e-88
Identity = 144/146 (98.63%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRGYN SEGISST EAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI
Sbjct: 428 MNYRGYNSSEGISSTHEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 487

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW
Sbjct: 488 SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 547

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSS 146
           ESSMGGPLGEVLHSTNNIGGELKSSS
Sbjct: 548 ESSMGGPLGEVLHSTNNIGGELKSSS 573

[Close]

BLAST of Csor.00g167070 vs. ExPASy TrEMBL
Match: A0A6J1K8C6 (Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111492063 PE=3 SV=1)

HSP 1 Score: 278 bits (710), Expect = 6.66e-87
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRGYNPSEGISSTQEAAETQHS+RQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI
Sbjct: 429 MNYRGYNPSEGISSTQEAAETQHSVRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 488

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPN+RQ NWIPISW
Sbjct: 489 SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNSRQTNWIPISW 548

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSS 146
           ESSMGGPLGEVL STNNIGGELKSSS
Sbjct: 549 ESSMGGPLGEVLQSTNNIGGELKSSS 574

[Close]

BLAST of Csor.00g167070 vs. ExPASy TrEMBL
Match: A0A5A7V5I0 (Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001040 PE=3 SV=1)

HSP 1 Score: 259 bits (663), Expect = 4.93e-81
Identity = 131/146 (89.73%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRG+NPSEGI+STQE+AE+ HSLRQFFNNWPKNQSDSSSVSWSNSNLD QSDRTQLSI
Sbjct: 318 MNYRGFNPSEGIASTQESAESHHSLRQFFNNWPKNQSDSSSVSWSNSNLDPQSDRTQLSI 377

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPANEK+TLSPLKS QE+DP+QMGLGVGNVMDEPN+RQANWIPISW
Sbjct: 378 SIPMATSDFRSSTSSPANEKLTLSPLKSAQELDPIQMGLGVGNVMDEPNSRQANWIPISW 437

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSS 146
           ESSMGGPLGEVL+STNN GG+ KSSS
Sbjct: 438 ESSMGGPLGEVLNSTNNNGGDSKSSS 463

[Close]

BLAST of Csor.00g167070 vs. ExPASy TrEMBL
Match: A0A0A0LR18 (Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_2G354030 PE=3 SV=1)

HSP 1 Score: 259 bits (663), Expect = 1.00e-79
Identity = 131/146 (89.73%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRG+NPSEGI+STQE+AE+ HSLRQFFNNWPKNQ DSSSVSWSNSNLD QSDRTQLSI
Sbjct: 453 MNYRGFNPSEGIASTQESAESHHSLRQFFNNWPKNQPDSSSVSWSNSNLDPQSDRTQLSI 512

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPAN+K+TLSPLKS QE+DP+QMGLGVGNVMDEPNNRQANWIPISW
Sbjct: 513 SIPMATSDFRSSTSSPANDKLTLSPLKSAQELDPIQMGLGVGNVMDEPNNRQANWIPISW 572

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSS 146
           ESSMGGPLGEVL+STNN GGE KSSS
Sbjct: 573 ESSMGGPLGEVLNSTNNNGGESKSSS 598

[Close]

BLAST of Csor.00g167070 vs. ExPASy TrEMBL
Match: A0A1S3BBC2 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103487815 PE=3 SV=1)

HSP 1 Score: 259 bits (663), Expect = 1.04e-79
Identity = 131/146 (89.73%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MNYRGYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSI 60
           MNYRG+NPSEGI+STQE+AE+ HSLRQFFNNWPKNQSDSSSVSWSNSNLD QSDRTQLSI
Sbjct: 453 MNYRGFNPSEGIASTQESAESHHSLRQFFNNWPKNQSDSSSVSWSNSNLDPQSDRTQLSI 512

Query: 61  SIPMATSDFRSSTSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQANWIPISW 120
           SIPMATSDFRSSTSSPANEK+TLSPLKS QE+DP+QMGLGVGNVMDEPN+RQANWIPISW
Sbjct: 513 SIPMATSDFRSSTSSPANEKLTLSPLKSAQELDPIQMGLGVGNVMDEPNSRQANWIPISW 572

Query: 121 ESSMGGPLGEVLHSTNNIGGELKSSS 146
           ESSMGGPLGEVL+STNN GG+ KSSS
Sbjct: 573 ESSMGGPLGEVLNSTNNNGGDSKSSS 598

[Close]

BLAST of Csor.00g167070 vs. TAIR 10
Match: AT2G22840.1 (growth-regulating factor 1 )

HSP 1 Score: 85.9 bits (211), Expect = 4.0e-17
Identity = 55/113 (48.67%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 29  FNNWPKNQSDSSSV-SWSNSNLDLQSDRTQLSISIPMATSDFRSSTSSPANEKVTLSPLK 88
           F N  K+  + ++V SW     +L+SD TQLS+SIPMA        SSP  +K+ LSPL+
Sbjct: 368 FGNQAKHAGNHNNVDSWPE---ELKSDWTQLSMSIPMA-------PSSPVQDKLALSPLR 427

Query: 89  SLQEMDP-LQMGLGVGNVMDEPNNRQANWIPISW--ESSMGGPLGEVLHSTNN 138
             +E DP + MGLGV     +P  +  NWIPISW   +SMGGPLGEVL+ST N
Sbjct: 428 LSREFDPAIHMGLGVNTEFLDPGKKTNNWIPISWGNNNSMGGPLGEVLNSTTN 470

[Close]

BLAST of Csor.00g167070 vs. TAIR 10
Match: AT4G37740.1 (growth-regulating factor 2 )

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14
Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 5   GYNPSEGISSTQEAAETQHSLRQFFNNWPKNQSDSSSVSWSNSNLDLQSDRTQLSISIPM 64
           G+  S+ + +   A     S   F +N  K+  + +  SW     +L SD TQLS+SIP+
Sbjct: 362 GHISSDSLLNPNTAKTYGSSFLDFSSNQEKHSGNHNHNSWPE---ELTSDWTQLSMSIPI 421

Query: 65  ATSDFRSS-TSSPANEKVTLSPLKSLQEMDPLQMGLGVGNVMDEPNNRQAN-WIPISWES 124
           A+S   S+  ++ A EK TLSPL+  +E+D   + +       EP  ++ N WIPISW +
Sbjct: 422 ASSSPSSTHNNNNAQEKTTLSPLRLSRELD---LSIQTDETTIEPTVKKVNTWIPISWGN 481

Query: 125 SMGGPLGEVLHSTNN 138
           S+GGPLGEVL+ST N
Sbjct: 482 SLGGPLGEVLNSTTN 490

The following BLAST results are available for this feature:

BLAST of Csor.00g167070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AWY3	1.6e-18	42.31	Growth-regulating factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF6 PE=2...	[more]
O81001	5.6e-16	48.67	Growth-regulating factor 1 OS=Arabidopsis thaliana OX=3702 GN=GRF1 PE=1 SV=1	[more]
Q8L8A8	2.0e-13	39.26	Growth-regulating factor 2 OS=Arabidopsis thaliana OX=3702 GN=GRF2 PE=1 SV=1	[more]
Q6AWY2	1.2e-05	37.00	Growth-regulating factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF7 PE=2...	[more]

BLAST of Csor.00g167070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598319.1	2.72e-135	100.00	Growth-regulating factor 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023547102.1	1.52e-89	100.00	growth-regulating factor 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962461.1	1.17e-87	98.63	growth-regulating factor 1-like [Cucurbita moschata]	[more]
KAG7029290.1	7.40e-87	99.32	Growth-regulating factor 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022997005.1	1.38e-86	97.26	growth-regulating factor 1-like [Cucurbita maxima]	[more]

BLAST of Csor.00g167070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HD91	5.66e-88	98.63	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111462890 PE=3 SV=1	[more]
A0A6J1K8C6	6.66e-87	97.26	Growth-regulating factor OS=Cucurbita maxima OX=3661 GN=LOC111492063 PE=3 SV=1	[more]
A0A5A7V5I0	4.93e-81	89.73	Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LR18	1.00e-79	89.73	Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_2G354030 PE=3 SV=1	[more]
A0A1S3BBC2	1.04e-79	89.73	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103487815 PE=3 SV=1	[more]

BLAST of Csor.00g167070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22840.1	4.0e-17	48.67	growth-regulating factor 1	[more]
AT4G37740.1	1.4e-14	39.26	growth-regulating factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..156
None	No IPR available	PANTHER	PTHR31602:SF51	GROWTH-REGULATING FACTOR 9	coord: 1..158
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g167070.m01	Csor.00g167070.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding