Csor.00g166530 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCTTTGCCTTCTTGAACTCCTTGAGCAAGTTCCTCCATTTGTCAGTACACATAGTCGGGGAGCGATCAAAGCCCCTTTCCCTCATCTTAGCCGATATCTGCTCCCACAAATGCTTGTTGGATTTCGAGGTATTGAACAAACCATCCATCTCCCGGCGTAGGGAAATTAAGCTTCGAGTCTCATCCTGAACCCAGGTCTCCGCCCGCTTCTTCGGAGCCTTGACTTCATGATCCTCACCACTGCTATCGCCGAGCATCATTTGGTGCTGCTGATGAGTCGGCTGTGGCTGATGAGGTTGAATATGGTGGTCGCCATTGGAAGCGACCTCGATCATCATATCTCTGCTACCTTCTTCCTTGTAAATATCGATTGGGCGAGGCTTATCAGACAAGTACATAGTCTCTGGGTCAGGGGATTCCGTGAAATTTCTAAAAAGATGGGACTTCGTAGGGTGAGCGTGCGGAGAATCAAACGAACGATGAGCCCACACCTTCAAATTTTCATTTCTTTTCTTTTTTTCTTTTTCTTTCTGCGACTGCAAGTTCAGAGACTCCGTCCTTTTTTCCGCAGGTCAGTAAGTCCTGAGGGCTGAACCCAATGCGCGCGCACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGACGAAGGTCGCGTGTGATGCCGGAGAAACAGGGAATAATTGTACGGATAAATTTGGAAATATTGTGAATCTTTTTTACTCTTTTGGAATTTATGATTAAATTTTACATTTTTATATTTGCTAAGTACGATTTTTTAAAATTAGTTATTTTATTAGATGTAAATTTAAAATTTTATATTTAATTCATAATGTATTTTATATTTAAAAAATTAAATTTGTAATTTCAAGATTTCGTTAAATAGATATTAATTTCAAAATTTAGAAACTCCAGCAATAAATTAACTTAGTTTTATAGTTTATATTTTATTTTAATTCTTTTTTTTTTTTTTTTTTTTTTTTGAGATTTTAATTGACAAGAATATCGAATGTGAATTAGACTTGTTAGAATATATGTATTTAACCAAAAAGTTAGATAGTTCGAATTTTCTATCAAAATTTCTATAATAACTAAATTAAAAAATTTTAGAATTACTAAATTGAAGTCAATGTTGCAAGCATCTACTGTTTAAATTATATATGAATAATTTATTTGATTAATATATTTAAAGGAATTCGGTCCAATATCTGGAGACAAGTTTTGTAGTCGCAGACGGCCCAAAAGTTGGAAAACTTATAAACAATGGAAAAGGGGCCCAAGTCTGGTTTTCTTAGTCATAGGCTTAGCTCCTAAAGGTTCCCTCCCTTTCACTGGACCTGTGGAGCCAAATCAACCCCCAATCATCGGATTGCCACCATTGAGCACATTCAGCACAGCCTTAGGCTTCTGTAAAGGAAACCGTCGCTTTCAGCTATGGCATGAGGAAGTGTTCCCTTTGGAGATTCAAAAACCAGAAGCACCACAGCAGTGTGCTATGGAGTGGGGTGTGCTCAATGAAGCAATCGCCATTGATCGGTATAAAAGCATCACAGGTCATATAAGCCGACACCCACACACACGCAGAGTGGACTAGCAATTGCTAAGAGCATCAAATTAGCAGGCGAGGCCAAACTGTTGTGTCGGAAGGTAGCCGGGCATGTTGAATTTTTCCGATGAAGTTAGGTAGCATCTAAAAATACATTTTTGTAACCACATTTTCCATCTCATACAATCATATTCATAACAGTAGGGAACAGGCCTCCAGTTTCATGGTGATAATGACGCTAGAACTAGTCCAGCAAGAGGAAGCACACATCGTCCAAAGATACAATAACATTTATAGTCTGTTTATTTCGTTCCCCCTTCCCCGTCCACGGGTGGTCAAAACAAGCAAAAGTACTGCCTGATGAAGAAACCAGATGCAAAAAAAATGTCGAAGACAGTGACTTGGATAAACGACATGAAACACAGGCAAGGGGGCTCATCCACCCATGAATTCGGACTATAAAAGAGGTCAAACCCTAAGAATGCACATGGCTAAGAAGAAATTCCATCCGAAATACCACACAGGCCAACAGCAGCCTCTTCATGAAGATGCTAAGGCTATAACAGACGCCATACTTCCCACACTATATGCAGATATCAGGACTTGGAAATTGGACTAG ATGGTGCTTTGCCTTCTTGAACTCCTTGAGCAAGTTCCTCCATTTGTCAGTACACATAGTCGGGGAGCGATCAAAGCCCCTTTCCCTCATCTTAGCCGATATCTGCTCCCACAAATGCTTGTTGGATTTCGAGGTCTCCGCCCGCTTCTTCGGAGCCTTGACTTCATGATCCTCACCACTGCTATCGCCGAGCATCATTTGGTGCTGCTGATGAGTCGGCTGTGGCTGATGAGGTTGAATATGGTGGTCGCCATTGGAAGCGACCTCGATCATCATATCTCTGCTACCTTCTTCCTTGTAAATATCGATTGGGCGAGGCTTATCAGACAAGTACATAGTCTCTGGGTCAGGGGATTCCGTGAAATTTCTAAAAAGATGGGACTTCGTAGGGAATTCGGTCCAATATCTGGAGACAAGTTTTGTAGTCGCAGACGGCCCAAAAGTTGGAAAACTTATAAACAATGGAAAAGGGGCCCAAGTCTGGTTTTCTTAGTCATAGGCTTAGCTCCTAAAGGTTCCCTCCCTTTCACTGGACCTGTGGAGCCAAATCAACCCCCAATCATCGGATTGCCACCATTGAGCACATTCAGCACAGCCTTAGGCTTCTGTAAAGGAAACCGTCGCTTTCAGCTATGGCATGAGGAAGTGTTCCCTTTGGAGATTCAAAAACCAGAAGCACCACAGCAGTGTGCTATGGAGTGGGGTGTGCTCAATGAAGCAATCGCCATTGATCGGTATAAAAGCATCACAGGCAAGGGGGCTCATCCACCCATGAATTCGGACTATAAAAGAGGTCAAACCCTAAGAATGCACATGGCTAAGAAGAAATTCCATCCGAAATACCACACAGGCCAACAGCAGCCTCTTCATGAAGATGCTAAGGCTATAACAGACGCCATACTTCCCACACTATATGCAGATATCAGGACTTGGAAATTGGACTAG ATGGTGCTTTGCCTTCTTGAACTCCTTGAGCAAGTTCCTCCATTTGTCAGTACACATAGTCGGGGAGCGATCAAAGCCCCTTTCCCTCATCTTAGCCGATATCTGCTCCCACAAATGCTTGTTGGATTTCGAGGTCTCCGCCCGCTTCTTCGGAGCCTTGACTTCATGATCCTCACCACTGCTATCGCCGAGCATCATTTGGTGCTGCTGATGAGTCGGCTGTGGCTGATGAGGTTGAATATGGTGGTCGCCATTGGAAGCGACCTCGATCATCATATCTCTGCTACCTTCTTCCTTGTAAATATCGATTGGGCGAGGCTTATCAGACAAGTACATAGTCTCTGGGTCAGGGGATTCCGTGAAATTTCTAAAAAGATGGGACTTCGTAGGGAATTCGGTCCAATATCTGGAGACAAGTTTTGTAGTCGCAGACGGCCCAAAAGTTGGAAAACTTATAAACAATGGAAAAGGGGCCCAAGTCTGGTTTTCTTAGTCATAGGCTTAGCTCCTAAAGGTTCCCTCCCTTTCACTGGACCTGTGGAGCCAAATCAACCCCCAATCATCGGATTGCCACCATTGAGCACATTCAGCACAGCCTTAGGCTTCTGTAAAGGAAACCGTCGCTTTCAGCTATGGCATGAGGAAGTGTTCCCTTTGGAGATTCAAAAACCAGAAGCACCACAGCAGTGTGCTATGGAGTGGGGTGTGCTCAATGAAGCAATCGCCATTGATCGGTATAAAAGCATCACAGGCAAGGGGGCTCATCCACCCATGAATTCGGACTATAAAAGAGGTCAAACCCTAAGAATGCACATGGCTAAGAAGAAATTCCATCCGAAATACCACACAGGCCAACAGCAGCCTCTTCATGAAGATGCTAAGGCTATAACAGACGCCATACTTCCCACACTATATGCAGATATCAGGACTTGGAAATTGGACTAG MVLCLLELLEQVPPFVSTHSRGAIKAPFPHLSRYLLPQMLVGFRGLRPLLRSLDFMILTTAIAEHHLVLLMSRLWLMRLNMVVAIGSDLDHHISATFFLVNIDWARLIRQVHSLWVRGFREISKKMGLRREFGPISGDKFCSRRRPKSWKTYKQWKRGPSLVFLVIGLAPKGSLPFTGPVEPNQPPIIGLPPLSTFSTALGFCKGNRRFQLWHEEVFPLEIQKPEAPQQCAMEWGVLNEAIAIDRYKSITGKGAHPPMNSDYKRGQTLRMHMAKKKFHPKYHTGQQQPLHEDAKAITDAILPTLYADIRTWKLD Homology
BLAST of Csor.00g166530 vs. NCBI nr
Match: KAG6598265.1 (hypothetical protein SDJN03_08043, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 643 bits (1658), Expect = 7.69e-233 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of Csor.00g166530 vs. NCBI nr
Match: XP_038884044.1 (uncharacterized protein LOC120074988 isoform X2 [Benincasa hispida]) HSP 1 Score: 110 bits (274), Expect = 7.27e-24 Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of Csor.00g166530 vs. NCBI nr
Match: XP_038884042.1 (uncharacterized protein LOC120074988 isoform X1 [Benincasa hispida]) HSP 1 Score: 110 bits (274), Expect = 2.06e-23 Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of Csor.00g166530 vs. NCBI nr
Match: XP_022131521.1 (uncharacterized protein LOC111004694 isoform X2 [Momordica charantia]) HSP 1 Score: 108 bits (270), Expect = 2.75e-23 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of Csor.00g166530 vs. NCBI nr
Match: XP_022131520.1 (uncharacterized protein LOC111004694 isoform X1 [Momordica charantia]) HSP 1 Score: 108 bits (270), Expect = 7.47e-23 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of Csor.00g166530 vs. ExPASy TrEMBL
Match: A0A6J1BPQ6 (uncharacterized protein LOC111004694 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004694 PE=4 SV=1) HSP 1 Score: 108 bits (270), Expect = 1.33e-23 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of Csor.00g166530 vs. ExPASy TrEMBL
Match: A0A6J1BPX6 (uncharacterized protein LOC111004694 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004694 PE=4 SV=1) HSP 1 Score: 108 bits (270), Expect = 3.62e-23 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of Csor.00g166530 vs. ExPASy TrEMBL
Match: A0A5A7V2D1 (Restriction endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001630 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 4.83e-22 Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of Csor.00g166530 vs. ExPASy TrEMBL
Match: A0A1S3BA93 (uncharacterized protein LOC103487752 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487752 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 4.83e-22 Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of Csor.00g166530 vs. ExPASy TrEMBL
Match: A0A1S3B9S9 (uncharacterized protein LOC103487752 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487752 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 1.22e-21 Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of Csor.00g166530 vs. TAIR 10
Match: AT1G67660.1 (Restriction endonuclease, type II-like superfamily protein ) HSP 1 Score: 72.4 bits (176), Expect = 7.3e-13 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Csor.00g166530 vs. TAIR 10
Match: AT1G67660.2 (Restriction endonuclease, type II-like superfamily protein ) HSP 1 Score: 72.4 bits (176), Expect = 7.3e-13 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Csor.00g166530 vs. TAIR 10
Match: AT1G67660.3 (Restriction endonuclease, type II-like superfamily protein ) HSP 1 Score: 72.4 bits (176), Expect = 7.3e-13 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|