Csor.00g166000 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g166000
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionThioredoxin-like fold
LocationCsor_Chr05: 66996 .. 73664 (+)
RNA-Seq ExpressionCsor.00g166000
SyntenyCsor.00g166000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGACCCAACAATTTTGGATAGAATGCTTATTCACCTTCGTGCGACATGCAAGTATGTGATGTTGTTGTTGTTATCTTTTTTCGGGGCAAGGAATTGGGAAGTCTGACCCCTGATATCAGCCATATGATTGAATAAGCACTCTGTGGACTTTGCAGCTCTTCATTTTTGCTCTTTTAGCAGTAGTTGTTTCTATGATTATGACACGCGAAATTTACTTCCTACTAGAATGGATGTGACCCCATTTTCATCTGCATCCAATCAATTCCTTCAAATAATCTATTTTCACTCCACTGTTGATCTCTTCCTTGATCATCTTGCTGTTATGCTTTCTATGCGGCGGCACCATGTTACTAACCTGCCATTTTCCGCCCAGGCAATCCATCTCATTGTGATTGCTCAAGCTGATAGTTTACCTTAAATTTAATTGTATCAATACTTCAACACTCTCCCTTCCTTGCTTGTGAGCTCGAAAAATTGTAAAAAACTCAACAAGTGGAAATTGATATTAATTGTGGTGAAAATAAGATTACAAAGGTTTGAATACATGACCTCTTGCTCTGAAATCATGTTAAATCACCAATAAACCCAAAAGCTTAAGCGGATAGGTTGTGGTAAATTTACTAATATCAATAACTCAACTGTCATAAGAATTTCTAGTTGCCTTCAAACATCTAATCCACCTCTCATCTGATGTTGTGAACTAACCTCATATCCATCTAGGCAGAGGAAAATGGAAAGAGGGGCCCTTTTAGTTCTCCTTAGATTAAAATGAAACTGTTAACATTTTGGGTTTCCACCCCTTCCGAACCCTCTAATCCAGGAAAGTCTTATATTTATTTTGGGTTCCCCTTAACAATCACTTTATTATATTTGAGAAGTTGAACTATGAGTTACTCTCTCTCTTATATTTATTTATGTTAAGCTTGGATCATTTCATCTATTAGTTTCTGTTGTTGGATGAGGATATTTGGAGTTCCATGTCCATGTTCCATGAAGATAAGCATTTTTGTTCATTTTAGGCAAGAGCCGATTTTCTAAGTTGTATCTAGCATTATAATGGTCAAAGGTACATGATTAGGATAAACTTTTCTTCCAGACTGCATTCTACTTTTGTGAGATACGACTCTTTGTAGTCTGTTTTTTTTTTTCTTCACAATTTTGCTTATTCCACATCCCTCTACTTGTTATAGATACTATACTGGTTTCCCAAAAGATCTTGGGCCTTCAAGGGTCATACATTTTACATCTGAACGTGAGTTTGTCCAGCTCCTTCATGAAGGTTATCCAGTCGTTGTTGCTTTTACAGTCAGGTACATGAATACTGTTCGTATTAGCACCTTCCTTTTGTTCTCTAGGTTAAATGCTCATGTTTAATTCTATAGAGGTAATTACACAAAGCATCTTGACAAAGTATTGGAGGAAGCTGCGGTTGAGTTTTATCCGACTGTGAAATTTATGCGTGTAAGTCATTTTCTTATGATAGGAGTACCCGACGTGCCATGATTTATTGACGTTTTTCTTTTCTTATCTTTTAACAGCTTCATTTCTTCTGAAGTCTAACTGAGTTACAGAACTTTTACAATGGTTTGTTTGATTTATTTTTATTTTTCTTATTATTTAATCACATTTGTCATCCTTTGCATCATTTTTTTTGCCGCCTATTTATTTTACTTTATTTCAGAGATTAAAATAGTAATAAAAAAACATTGCATTCTGTTTTTATTGACTTACATGTCTCTTGAGCATGCTTATATGTCTGGGGGTACGTCTCAAACTCCGCTTCCTCTAATTGATGCCCCATCTGTATTGAAATGTTTCTGCCTTTTGGGGTTATTAATTTTTTTTTTTTTTTTTAAATGTTATTCGAAAATATATAGAATGACTTGTTAATGTTAATCTTATTGTGCATATTGAAATCACCATGCACAAATTTATGATTTCTCATTACAAGATATCCATATAACTTCCTTGATCTTCTTTAAGCCGTTTTCTTATGTTTCTTGTCATTTTTTTTTATGAAAATGTTCCTTGAGCCGTTTTCTTAATTTCATTGTAACGGTCATTTTATCATTGTGCCTCTGTGATCCATGGATTTAGTCAATAGTTCGAAACAATAGACAACATCATAATATGCCACTGCATTTTTTGTGTTTACTTTCTTGTGACTTCGATCTCATGTTTAAACTTCAGGTTGAGTGCCCAAAGTATCCTGGTTTCTGCATTTCACGGCAGAGAAAGGAATATCCATTTATCGAGATGTTTCATAGCCCACAACAAGTAGGACTGCCCATCTGATTGTGTTTTGTCTTAGTTTGATTTCCAGTGTAACCGTATATGATTTTGTTTCCAATTCTTGATTAATGGGAAAATAAGCTCTTTCTTGAATAGTGTTGTGCTTACTTTTGTCAATGCTGTATACAATTTATCTTGAACTTTAGTTGGCCATAAAATGTGATAATGCATTTTTTTTAATATAAAACAGACAGAAGCAAATTCGTATTGACAAAAGATAACAGCTTAAGGGAAAGGGCTAAAATTTGATAATGTAGGCGATCATTTTTCTTCTTTGCCTTGATGGTTGATTTATGATTTTTTTGCATTTTGTTGTCTGAATGATCAAAGAAACGTTTTTGTTTGTTTGTTTGTTTTTAGTAAAAATACTGAAGTAATTCGTGCTGCGATGGTGGCTTCTAGCTCTGTGGTCTATATAGAACTTTCTTCACATGTTTGTATCCAGAACAAGTGGCTTTAATCCAATATTATTGTGCTTGCATTTCATTTCTTGCAAGCACAGCTGAACCAACAGATAATGGAACCATTAATGAACATTGCTGCTTTAATGCTCAAGAAAATATTGACTATTTTTTTTATTTAGAAGATGGATTTGTTCCATTTTACGTTGTTTTTACATTTAGAAACATTGTATTGTAAACAACAAGCTGATGGGAGATACGGTCTTAAATGGAATCTAGGCAAACTCTATCAATACTGCCGTAAAATAGTACTTATCTATATGCTAAAAGAAAATGTGTATACCTTACCGTTTTCATTCTCAGTCCATTTATTAATGATTTGAATTCAATATTTTTTGTGCAGGCATCTAGCCAGGGAAAGATTTCTGATCCTAACATTACGAAGTACTCGGTGAAGGTTCTACCCGTAAGTTTTCATGCTCTGTTAACCTAAGCATACTCAATTTATCAATTCATTTCTCATTGCTGATGCTTTCACGTATGGTCATTGTCCTTTTTCCACAGCATCTCCCCTTCTTACATCCCATCCCAGCAACACTAAAAGAAGTTTATGTAACGAACTTAACATTTGATTTGATGTCTTGTTTTTTCACCTGATTTTATTAACATTATTTACCATTGAACATATGGTATTTTAAAATGATTGGCTGGCTTTTAACCCAAATAAGGCCTAATGAAGTTTTCTCTGCTGGAAAATATTGAAGTTCTCAATTCCGCAAGCTAAGCTTCTAATAATAAATGGGATCCTTCACTGACCTACGTTTCTGTTTCATTGATTTGTTTATTTTCTTTTATCCAGTTCAACTATGACCCCAGTGCCTACGGATTCAGAGAGTTTTTTAAGCGTCACGGGATATATGGTCGCTGAAGCAAAAGTAATACACGGTCAAGAGCGCAAAGCCTTTGTAACTTATCTGTGATTTTGAACTGGTTTGTGCTGTACATGATGGATACAAACTCCATAGATGTTTAATCTTTATGCCCACATGAAAAGTAGACTCATACAAGATACTTCCTGGTTTTTTGCCAGTCAGGTTACATTCAGTATTTTTTTTTCCCTTTCTTTTTGGATCGTCTTTTTTCCAACATTTGTATTACCTCACTTAATTTAGCAAAAATAGCTAGTGCGTTGTAGCTCCCTTAAGCATATAGTATTGTGGTATCCGAAATCTTATCATTGCAAACTTTGAAGTTGGCTACATGTTTGGTTTTCACCCTCGAGTTTGTATAACTAGGTTCGCAGGAAAGTTAGCCGAATATCCTCTGTGGTAATATTGATATCTAATTTCTTTCCAAGGGGCCATCTTCAGAACATTTCATTTGCCTCTCTTCAGTATGAAATTATTTATTTGAAGTCAGTGGATTGTGACTCAGGTTCGGGGCTTTTAGTACATGTTTCTTAGTTATGTAATTGTTTACTTTGGCTAGAAGAATATATAAAATATATAGTTGTTTTCTTTTATTATGGGAACTTTTTTTTACGAGAAAAGAATGTAACTAATTATGTCAAATTAAACACTACTACGTTTTTTTAAAACAAAATATTGTTTCCAAACATTTTTAATTATCTTGATAGTTATCACAATAAATATAGTTCAAAGGCAACGTGGTATTTGTTTACTTGAAATTCTTCATTTATTTTTTTTTTTGTAGGGATCAAATAGTGGAGTAACCATAAAAAATTTACACAATCTTTTTCCATTTTTATATATTTTTAATAAGAAAACTATTAATTTAAAGAATTTTTATAATTAGTAATTTTCACCATATAATATAATTTCAAAACATCAATAAATCAAATAATATTTCATAAACTAAAATATAATATAATGTTTTGCACTATAATTTTTAAAAATTAAAAAATGGAAGAATATATGTGCGGAACCGAAAACGTTTTCAGTGGACTGGGCCCTCGTTAGGAAATTTTTGTTCGTGGGCCGGCCCAACTTGAATCATATAAAACTAAGATTTGAATTGAAAACCGTGGTGCATGTTTTATTTACGGGAGCGCGGGAGTTGGTTTTAACATCCTCTCAAAGCTGCAACCATGGAATTTGCTTCTCTTCAAGACCTCTGCCTACTAGTAAGTTCAATCTTGTTGAACTGAGACCGATATTTATTTTTTGTTTTCTTGTTTTGTGAGACTTAAAGCACGAGAGATTTTGAAGAATACTCTTCCTGAACTTGCATAGTGCAGCTAATTTCTTCGGCAATACGGAGATGCATCTGCTCGGAACGACTTTGCAGACTCTCAGTTCTTCTGCAACGCTCTCCCGCTTCCGATCCTCCACTAGTTCGTATTTCTAGTAAGTGATTTCCCACGCTCTTTGTCGCCGGCGATTCTGGAAATATTAAAAATCTCATCAAGTCCTTTTCAATTTTGGTTTATAACACATTTTGACGACTCTGTTCTCAGTTAGTTACGTTCGGTTCTGAAGGAAGCACCAAAGCTTGAAAAATTATGAAGAAAAATTCGCACCGAGTAATATTCATTTCTCAAAACATTATTTCTAGATTTTTTTTTTTCGATGTAGTTTCAGATACCGGCCTTGGAAGCTGCATAGAGGAGTTTCAGAATTTGAAGTGCCCCGTTGAAGGTATCCTTGCCGAAACATGGAGTGAGTAATTGACTCTGCTCCTGTAGCGCTCTGGCAGCACTTGATGATTAGTAAAATATTTTGATTAGTACCTCTACATCATTTCATTATTCTTCGTGTTACTGTTTTATTGTTTTCTTATCCTGCCATTCAATGCAGTAGCTCATGTATAGCTGTAGACATCTTCATTGTTTTCGTGAGTATGTGCAACTTTTCTTACCTTCCTACCTATAAGGCAACACGAGCATACATGTTTAACCAGCGATTATATTTTCTCCTTAGTCAATAAGCTAAGCTGAGGCTTACCACAAACAGCAAGTCCAACCATCGTCCTCTCGAAAAGCTGCATTCAGAAAACAATTCTTCATCACATTTATAATTGTTTGTTGAAGTTATGTCGGTTATATGTATCTATATTCACGTTGAAAAATTATTTAAATACTCTGCCGTAGGGTTTGCTATGTTGATTAATACATCTCCGCTATTTTATGCAGACGGAATTGTTTATGTGAGAACTACAAGTAAGTTCCATTTCCTCAAAATTACTTTGGTTCAGTTAATGGCTCGGGGAAGAATGAATTTAGCATCTGCTTCAACACCTCCAAGGAAGAGTCACTAGCTGTGTCCTAGAACTGAGATCCCTTCCTAATCATTCATCAGCACATTTTGTACATTTTTACTGTATGCTGAATTTTTAGATCAATTCCTAAGTGCATAGCAGCATAGGTGTAAGATAAGTTTAGTGTGAATGGATACTTAAGGAAAGAAGATGATGTTCTAAATTGATGAAAAGAAACTGATTTATCGACAATTTACAAGCCTTTCTAGCATATTATATTTATTTTGCGTAGTTTTGCTTCATGAAGTTGTACTCTGTTTTTTAAATCTTGTACCTATTGTGCATATACTAACGCCCTGTAGAGATTGCAGATATTTGTGATAAAGAGATAAGTTGTTATGAGTTGAATCTGAAAGAGAATGTCACTACCAGGAAGCCAATTCTGCTACCTTCGAACATCAAGCATGGTGTGAAATTCAGGCATGGAACCATTTTAACTTTTTGGTCACTTCTCTTTATTTTTATTTGGAATAGGCAGTAATCGGATTTTTTAAAATACGTGAACTAGTGGAACCGAAGTGTGTTTGTCTGTTTCTGAAAGTGTTGATGTTTTGCTGGAGGAGTTCAACTGCTTCTTTCAGAAGGTCTCTTTCTTCTTTATGGCTGAATCTATTTACTAATTTCTGTCTTAGGATAACATTTGATTGTATCTTAACTATTTTTCTTTGCAGTATGCCAGCTATTTTACTGCTTAA

mRNA sequence

ATGGGAGACCCAACAATTTTGGATAGAATGCTTATTCACCTTCGTGCGACATGCAAATACTATACTGGTTTCCCAAAAGATCTTGGGCCTTCAAGGGTCATACATTTTACATCTGAACGTGAGTTTGTCCAGCTCCTTCATGAAGGTTATCCAGTCGTTGTTGCTTTTACAGTCAGAGGTAATTACACAAAGCATCTTGACAAAGTATTGGAGGAAGCTGCGGTTGAGTTTTATCCGACTGTGAAATTTATGCGTGTTGAGTGCCCAAAGTATCCTGGTTTCTGCATTTCACGGCAGAGAAAGGAATATCCATTTATCGAGATGTTTCATAGCCCACAACAAGCATCTAGCCAGGGAAAGATTTCTGATCCTAACATTACGAAGTACTCGGTGAAGGTTCTACCCTTCAACTATGACCCCAGTGCCTACGGATTCAGAGAGTTTTTTAAGCGTCACGGGATATATGTTTCAGATACCGGCCTTGGAAGCTGCATAGAGGAGTTTCAGAATTTGAAGTGCCCCGTTGAAGAGATTGCAGATATTTGTGATAAAGAGATAAGTTGTTATGAGTTGAATCTGAAAGAGAATGTCACTACCAGGAAGCCAATTCTGCTACCTTCGAACATCAAGCATGGTGTGAAATTCAGTGGAACCGAAGTGTGTTTGTCTGTTTCTGAAAGTGTTGATGTTTTGCTGGAGGAGTTCAACTGCTTCTTTCAGAAGTATGCCAGCTATTTTACTGCTTAA

Coding sequence (CDS)

ATGGGAGACCCAACAATTTTGGATAGAATGCTTATTCACCTTCGTGCGACATGCAAATACTATACTGGTTTCCCAAAAGATCTTGGGCCTTCAAGGGTCATACATTTTACATCTGAACGTGAGTTTGTCCAGCTCCTTCATGAAGGTTATCCAGTCGTTGTTGCTTTTACAGTCAGAGGTAATTACACAAAGCATCTTGACAAAGTATTGGAGGAAGCTGCGGTTGAGTTTTATCCGACTGTGAAATTTATGCGTGTTGAGTGCCCAAAGTATCCTGGTTTCTGCATTTCACGGCAGAGAAAGGAATATCCATTTATCGAGATGTTTCATAGCCCACAACAAGCATCTAGCCAGGGAAAGATTTCTGATCCTAACATTACGAAGTACTCGGTGAAGGTTCTACCCTTCAACTATGACCCCAGTGCCTACGGATTCAGAGAGTTTTTTAAGCGTCACGGGATATATGTTTCAGATACCGGCCTTGGAAGCTGCATAGAGGAGTTTCAGAATTTGAAGTGCCCCGTTGAAGAGATTGCAGATATTTGTGATAAAGAGATAAGTTGTTATGAGTTGAATCTGAAAGAGAATGTCACTACCAGGAAGCCAATTCTGCTACCTTCGAACATCAAGCATGGTGTGAAATTCAGTGGAACCGAAGTGTGTTTGTCTGTTTCTGAAAGTGTTGATGTTTTGCTGGAGGAGTTCAACTGCTTCTTTCAGAAGTATGCCAGCTATTTTACTGCTTAA

Protein sequence

MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRGNYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGKISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYVSDTGLGSCIEEFQNLKCPVEEIADICDKEISCYELNLKENVTTRKPILLPSNIKHGVKFSGTEVCLSVSESVDVLLEEFNCFFQKYASYFTA
Homology
[Close]
BLAST of Csor.00g166000 vs. ExPASy Swiss-Prot
Match: Q5Q0E6 (Type 2 DNA topoisomerase 6 subunit B-like OS=Arabidopsis thaliana OX=3702 GN=MTOPVIB PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-12
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 0 

Query: 154 IYVSDTGLGSCIEEFQNLKCPVE-----------EIADIC--DKEISCYELNLKENVTTR 213
           I ++DTG+G  +EEFQNL+CP E            +   C  D E+  Y +NL E +  +
Sbjct: 48  ISIADTGIGCNLEEFQNLRCPREFNGAKIWDGLLSVKTTCFTDDEVYYYHINLDEYIANK 107

Query: 214 KPILLPSNIKHGVKFSGTEVCLSVSESVDVLLEEFNCFFQK 242
           +    PS  K+G KFSGTEV LSV  S+DVL+     FFQK
Sbjct: 108 RLKRQPSQAKNGAKFSGTEVSLSVFGSMDVLVAPIIGFFQK 148

[Close]
BLAST of Csor.00g166000 vs. NCBI nr
Match: KAG6598213.1 (Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 520 bits (1338), Expect = 2.80e-186
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYVSDTGLGSCIEEFQNLKCPVEEIAD 180
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYVSDTGLGSCIEEFQNLKCPVEEIAD
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYVSDTGLGSCIEEFQNLKCPVEEIAD 180

Query: 181 ICDKEISCYELNLKENVTTRKPILLPSNIKHGVKFSGTEVCLSVSESVDVLLEEFNCFFQ 240
           ICDKEISCYELNLKENVTTRKPILLPSNIKHGVKFSGTEVCLSVSESVDVLLEEFNCFFQ
Sbjct: 181 ICDKEISCYELNLKENVTTRKPILLPSNIKHGVKFSGTEVCLSVSESVDVLLEEFNCFFQ 240

Query: 241 KYASYFTA 248
           KYASYFTA
Sbjct: 241 KYASYFTA 248

[Close]
BLAST of Csor.00g166000 vs. NCBI nr
Match: XP_022996547.1 (uncharacterized protein LOC111491762 [Cucurbita maxima] >XP_023545217.1 uncharacterized protein LOC111804696 [Cucurbita pepo subsp. pepo] >KAG7029196.1 hypothetical protein SDJN02_07533 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 332 bits (850), Expect = 2.58e-113
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155

[Close]
BLAST of Csor.00g166000 vs. NCBI nr
Match: XP_022962537.1 (uncharacterized protein LOC111462937 [Cucurbita moschata])

HSP 1 Score: 326 bits (836), Expect = 3.51e-111
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDP  LDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPKFLDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSP+QASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155

[Close]
BLAST of Csor.00g166000 vs. NCBI nr
Match: XP_038885436.1 (uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885437.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885438.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885439.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885440.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida])

HSP 1 Score: 317 bits (812), Expect = 1.59e-107
Identity = 145/155 (93.55%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPT+LDR+L HLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTVLDRILSHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYP +KFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQAS+QGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPNIKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASNQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155
           +SD N+TKYSVKVLPFNYDPSAYG REFFKRHGIY
Sbjct: 121 MSDSNVTKYSVKVLPFNYDPSAYGLREFFKRHGIY 155

[Close]
BLAST of Csor.00g166000 vs. NCBI nr
Match: XP_022132238.1 (uncharacterized protein LOC111005143 [Momordica charantia] >XP_022132239.1 uncharacterized protein LOC111005143 [Momordica charantia])

HSP 1 Score: 312 bits (800), Expect = 1.18e-105
Identity = 144/155 (92.90%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MG+PTI DRM+ HLRATCKYYTG+PKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGEPTIFDRMISHLRATCKYYTGYPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYP VKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQAS+QGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPNVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASNQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155
           I+DP+ITKYSVKVLPFNYD SAYGFREFFKRHGI+
Sbjct: 121 IADPSITKYSVKVLPFNYDLSAYGFREFFKRHGIW 155

[Close]
BLAST of Csor.00g166000 vs. ExPASy TrEMBL
Match: A0A6J1K286 (uncharacterized protein LOC111491762 OS=Cucurbita maxima OX=3661 GN=LOC111491762 PE=4 SV=1)

HSP 1 Score: 332 bits (850), Expect = 1.25e-113
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155

[Close]
BLAST of Csor.00g166000 vs. ExPASy TrEMBL
Match: A0A6J1HCY2 (uncharacterized protein LOC111462937 OS=Cucurbita moschata OX=3662 GN=LOC111462937 PE=4 SV=1)

HSP 1 Score: 326 bits (836), Expect = 1.70e-111
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDP  LDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPKFLDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSP+QASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155

[Close]
BLAST of Csor.00g166000 vs. ExPASy TrEMBL
Match: A0A6J1BSI0 (uncharacterized protein LOC111005143 OS=Momordica charantia OX=3673 GN=LOC111005143 PE=4 SV=1)

HSP 1 Score: 312 bits (800), Expect = 5.72e-106
Identity = 144/155 (92.90%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MG+PTI DRM+ HLRATCKYYTG+PKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGEPTIFDRMISHLRATCKYYTGYPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYP VKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQAS+QGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPNVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASNQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155
           I+DP+ITKYSVKVLPFNYD SAYGFREFFKRHGI+
Sbjct: 121 IADPSITKYSVKVLPFNYDLSAYGFREFFKRHGIW 155

[Close]
BLAST of Csor.00g166000 vs. ExPASy TrEMBL
Match: A0A1S3BIH6 (uncharacterized protein LOC103489940 OS=Cucumis melo OX=3656 GN=LOC103489940 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 4.92e-104
Identity = 140/155 (90.32%), Postives = 149/155 (96.13%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPT+LD +L HLR+TCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFT+R 
Sbjct: 1   MGDPTVLDTILRHLRSTCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTIRS 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NY+KHLDKVLEEAAVEFYP VKFMRVECPKYPGFCISRQRKEYPFIEMFHSP+QASSQGK
Sbjct: 61  NYSKHLDKVLEEAAVEFYPNVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155
           I+D N+TKYSVKV+PFNYD SAYGFREFFKRHGIY
Sbjct: 121 IADSNVTKYSVKVIPFNYDTSAYGFREFFKRHGIY 155

[Close]
BLAST of Csor.00g166000 vs. ExPASy TrEMBL
Match: A0A2I4HB13 (uncharacterized protein LOC109015033 OS=Juglans regia OX=51240 GN=LOC109015033 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 2.46e-100
Identity = 133/159 (83.65%), Postives = 147/159 (92.45%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDP+  DRM+  LR TCKYYTG+PKDLGPSRVIHFTSEREFVQLLHEG+PVVVAFT+RG
Sbjct: 1   MGDPSFFDRMICDLRTTCKYYTGYPKDLGPSRVIHFTSEREFVQLLHEGHPVVVAFTIRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAA +FYP VKFMRVECPKYPGFCI+RQR EYPFIE+FHSP+QAS+QG+
Sbjct: 61  NYTKHLDKVLEEAAAKFYPNVKFMRVECPKYPGFCITRQRTEYPFIEIFHSPEQASNQGR 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYVSDT 159
            +DPN+TKYSVKVLPFNYDPSAYGFREFFKRHGI  S+ 
Sbjct: 121 AADPNVTKYSVKVLPFNYDPSAYGFREFFKRHGIRASEV 159

[Close]
BLAST of Csor.00g166000 vs. TAIR 10
Match: AT5G57230.1 (Thioredoxin superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 3.7e-76
Identity = 122/158 (77.22%), Postives = 143/158 (90.51%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGD T LDRML+ LR+TCKYY+G+PKDLGPSRV+HFTSEREFVQLLH+GYPVVVAFT+R 
Sbjct: 1   MGDSTFLDRMLLQLRSTCKYYSGYPKDLGPSRVLHFTSEREFVQLLHQGYPVVVAFTIRS 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYT+HLD++LEEAA EFYP +KFMRVECPKYPGFCI+RQ+ EYPFIE+FHSPQ A ++GK
Sbjct: 61  NYTQHLDRMLEEAAAEFYPNIKFMRVECPKYPGFCITRQKNEYPFIEIFHSPQHAGNEGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYVSD 159
           + DPNIT+YSVKV+P+NYD S YGFREFFKR G+  SD
Sbjct: 121 VQDPNITRYSVKVVPYNYDMSPYGFREFFKRQGVRTSD 158

[Close]
BLAST of Csor.00g166000 vs. TAIR 10
Match: AT1G60460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 23 Blast hits to 23 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 0 

Query: 154 IYVSDTGLGSCIEEFQNLKCPVE-----------EIADIC--DKEISCYELNLKENVTTR 213
           I ++DTG+G  +EEFQNL+CP E            +   C  D E+  Y +NL E +  +
Sbjct: 48  ISIADTGIGCNLEEFQNLRCPREFNGAKIWDGLLSVKTTCFTDDEVYYYHINLDEYIANK 107

Query: 214 KPILLPSNIKHGVKFSGTEVCLSVSESVDVLLEEFNCFFQK 242
           +    PS  K+G KFSGTEV LSV  S+DVL+     FFQK
Sbjct: 108 RLKRQPSQAKNGAKFSGTEVSLSVFGSMDVLVAPIIGFFQK 148

[Close]
BLAST of Csor.00g166000 vs. TAIR 10
Match: AT1G60460.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 0 

Query: 154 IYVSDTGLGSCIEEFQNLKCPVE-----------EIADIC--DKEISCYELNLKENVTTR 213
           I ++DTG+G  +EEFQNL+CP E            +   C  D E+  Y +NL E +  +
Sbjct: 37  ISIADTGIGCNLEEFQNLRCPREFNGAKIWDGLLSVKTTCFTDDEVYYYHINLDEYIANK 96

Query: 214 KPILLPSNIKHGVKFSGTEVCLSVSESVDVLLEEFNCFFQK 242
           +    PS  K+G KFSGTEV LSV  S+DVL+     FFQK
Sbjct: 97  RLKRQPSQAKNGAKFSGTEVSLSVFGSMDVLVAPIIGFFQK 137

[Close]
BLAST of Csor.00g166000 vs. TAIR 10
Match: AT1G60460.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 0 

Query: 154 IYVSDTGLGSCIEEFQNLKCPVE-----------EIADIC--DKEISCYELNLKENVTTR 213
           I ++DTG+G  +EEFQNL+CP E            +   C  D E+  Y +NL E +  +
Sbjct: 48  ISIADTGIGCNLEEFQNLRCPREFNGAKIWDGLLSVKTTCFTDDEVYYYHINLDEYIANK 107

Query: 214 KPILLPSNIKHGVKFSGTEVCLSVSESVDVLLEEFNCFFQK 242
           +    PS  K+G KFSGTEV LSV  S+DVL+     FFQK
Sbjct: 108 RLKRQPSQAKNGAKFSGTEVSLSVFGSMDVLVAPIIGFFQK 148

The following BLAST results are available for this feature:
BLAST of Csor.00g166000 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5Q0E61.6e-1242.57Type 2 DNA topoisomerase 6 subunit B-like OS=Arabidopsis thaliana OX=3702 GN=MTO... [more]
BLAST of Csor.00g166000 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6598213.12.80e-186100.00Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosper... [more]
XP_022996547.12.58e-113100.00uncharacterized protein LOC111491762 [Cucurbita maxima] >XP_023545217.1 uncharac... [more]
XP_022962537.13.51e-11198.06uncharacterized protein LOC111462937 [Cucurbita moschata][more]
XP_038885436.11.59e-10793.55uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_03888543... [more]
XP_022132238.11.18e-10592.90uncharacterized protein LOC111005143 [Momordica charantia] >XP_022132239.1 uncha... [more]
BLAST of Csor.00g166000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K2861.25e-113100.00uncharacterized protein LOC111491762 OS=Cucurbita maxima OX=3661 GN=LOC111491762... [more]
A0A6J1HCY21.70e-11198.06uncharacterized protein LOC111462937 OS=Cucurbita moschata OX=3662 GN=LOC1114629... [more]
A0A6J1BSI05.72e-10692.90uncharacterized protein LOC111005143 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A1S3BIH64.92e-10490.32uncharacterized protein LOC103489940 OS=Cucumis melo OX=3656 GN=LOC103489940 PE=... [more]
A0A2I4HB132.46e-10083.65uncharacterized protein LOC109015033 OS=Juglans regia OX=51240 GN=LOC109015033 P... [more]
BLAST of Csor.00g166000 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G57230.13.7e-7677.22Thioredoxin superfamily protein [more]
AT1G60460.11.2e-1342.57unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G60460.21.2e-1342.57unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
AT1G60460.31.2e-1342.57unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 32..133
e-value: 1.9E-5
score: 26.5
NoneNo IPR availablePANTHERPTHR36076THIOREDOXIN SUPERFAMILY PROTEINcoord: 1..159
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 31..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g166000.m01Csor.00g166000.m01mRNA