Csor.00g165310 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g165310
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Rad60-SLD domain-containing protein
Location	Csor_Chr04: 7651336 .. 7653573 (-)
RNA-Seq Expression	Csor.00g165310
Synteny	Csor.00g165310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSstart_codoninitialintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGTCTCTTTCACTCTTTAATGGGCTCGGACGCTTTTCTGTATCGTCTTTACTCGTGGTTTCTCCTCCTCTCTCACTTGTCATTTCTTACTTTGAGTTCTTGATTTCAGGCGGATTATGCTGAAGAATTTGAGCCTTTGTTCGATTACAGCCGTGTTCAGCCTCGCTCCGTTGATTGTCTCGATGGTAATAGTTCTCAAGCATGGATGATATTGGAATTTAACGAAAGTCGGAAATTTTCTATCATTTATAATTCTCGCTTGAGCAAGAAATGTCGAAATTTAGTTTCCTTGTCCTTGCAATTTTGGAAATCGATGGTGATTTTGTGCTTTATTTTTCTCCTGTTTGGACTAAAAACATTAGACGAAGATTCAGACGCGTGCATGTCTCCGGAACCTTTTTCAAAGCGATCAAGGATTTTAAATCCGGCGGTATATTATTCCCTTCATGTAGTGAAATAGTAGATTTTCTGTCTGCACAATGCTTAAAATTAATGTTCGTTGAAACTGTCAGTGAAGGTAGCCTAAAATGATCGTTCCCTTTCAATCAATATTTAGGTTACGAGTTTGGTGGATGGTAACCGAAAAGATAAACAAGTGGAAATTGAAGATGAAGAGGAAGATTGGCTGCCTCCTCCACCAAAGGTGTCAGTTGATGCAAAGAATATGTGTGGGGAAGATTCCACATTGAAGGAGTTAAGGTATTCACACTTAGTGGTATGCATCTATTGCTTGGTTGATCCATTGATATAATAAAACGGAACTCTTTTTCTTTATGTGCGTAAGATGCTATGGCATGTGTCTCTTCCTGTACTGATAGGTTAATTAAGCTAGAGTTGGCCTCAGTTGCGCTATCTGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAATGGATGTTGGAAACACGCCCCAGGATCCCCTGGAGCCTGCTTTGGATGACCAAATTCCAATTGCTTCTAAAGAGAGAGCAAAGATTGTTATTTCTGTTCGAGACAGTGACAAGGAGGAGCTCAAACAGTTTCGCCTTTTCATGGTATGTTCTTATAGTGCAATCATCCTTTTTTGTCAATATATCTCATTGTTTACGATCACTGTTTTTGTTATACGTGCTAGATGCCATTTATTTGCCCTATAATCTTTCATTAGTAAGCATGTTTAGAATAGTATATAGGGAAATGAATAAATTTTGTGAGTTTGAGTTGAAAAATAAGAGAGAGAACGAATTAGGTATAGACTATCATAGCAAATCTTGAAACATTGATTAATGAAAAAGGTGTTCTGTGAATAATTGTAATTGTTCCAATTGATCGTTAAAAGGCAGAACAAACTTAAACTTTCTCCTTTGAATTCTTTTGTTACTTTCTGTAATAGCTAAGCCCACTCCGAGTAGATATTGTTCGCTTCAGCCCACTGCGAGTAGATATTGTTCGCTTCAGCCCGTTATGTATTACGTCAATTTCATAGTTTTAAAATGTGTCTATTAGGGAGAGGTTTCCACACCTTTATAAGGAATGTTTCGTTCTCCTCTCCAACTGATGTAGGATCTCACAATCCACCCTCTTGAGGGTCTAGAGTCCTTGTTGGCACATCACCAGGTGTCTGACTCTGATACCATTTGTTATAGCCCTAGTCTACCGCTAGTAAATATTGTCCACTTCGGCCCGTTACGTATCGCTGTCAGCCTCACGGTTTTAAAATGTGTCTGCTAGGTTGAGGTTTCCACACTCTTACAAGGAATGATTTGTTCTCCTTTCCAACCAATGTGGGATCGCACACTTTCTTTTACCCTTCAATTTGATTTTGTTTCCACATTATGATGGCCCTAACTTCTCTAATGTTATATGGTGATCATTAGATTTGAACATAGATGCTGAATGTTACTTTTGTTACATTAGTTTCTGTGTACAGTTTCTGCGATTTTGAATGTGCTTGTTTTAGAACAATGATGGGTCTTTCTATGATTCATTCACACTTAGATTATGCTGAAAGTACTATAGATCTCCAATGGTGATGATACTTCACATACTCTAATGTGGTTTCGAATTTGAATGTTTTTATAGGATGACAAGTTTGAGCGTCTTTTCAAAATGTACGCAGAGAAACGTAAAATCGATCCCAAGAGTTTGGTTTTCATTTTCGATGGGGATAAAGTCGGCCCAGACGATTCCCCAATTGGCCTTGGCATGGAAGACGATGACATGATAGATGCGATCATTAGGCCGAGTTGA

mRNA sequence

ATGGCGGATTATGCTGAAGAATTTGAGCCTTTGTTCGATTACAGCCGTGTTCAGCCTCGCTCCGTTGATTGTCTCGATGACGAAGATTCAGACGCGTGCATGTCTCCGGAACCTTTTTCAAAGCGATCAAGGATTTTAAATCCGGCGGTTACGAGTTTGGTGGATGGTAACCGAAAAGATAAACAAGTGGAAATTGAAGATGAAGAGGAAGATTGGCTGCCTCCTCCACCAAAGGTGTCAGTTGATGCAAAGAATATGTGTGGGGAAGATTCCACATTGAAGGAGTTAAGGTTAATTAAGCTAGAGTTGGCCTCAGTTGCGCTATCTGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAATGGATGTTGGAAACACGCCCCAGGATCCCCTGGAGCCTGCTTTGGATGACCAAATTCCAATTGCTTCTAAAGAGAGAGCAAAGATTGTTATTTCTGTTCGAGACAGTGACAAGGAGGAGCTCAAACAGTTTCGCCTTTTCATGGATGACAAGTTTGAGCGTCTTTTCAAAATGTACGCAGAGAAACGTAAAATCGATCCCAAGAGTTTGGTTTTCATTTTCGATGGGGATAAAGTCGGCCCAGACGATTCCCCAATTGGCCTTGGCATGGAAGACGATGACATGATAGATGCGATCATTAGGCCGAGTTGA

Coding sequence (CDS)

ATGGCGGATTATGCTGAAGAATTTGAGCCTTTGTTCGATTACAGCCGTGTTCAGCCTCGCTCCGTTGATTGTCTCGATGACGAAGATTCAGACGCGTGCATGTCTCCGGAACCTTTTTCAAAGCGATCAAGGATTTTAAATCCGGCGGTTACGAGTTTGGTGGATGGTAACCGAAAAGATAAACAAGTGGAAATTGAAGATGAAGAGGAAGATTGGCTGCCTCCTCCACCAAAGGTGTCAGTTGATGCAAAGAATATGTGTGGGGAAGATTCCACATTGAAGGAGTTAAGGTTAATTAAGCTAGAGTTGGCCTCAGTTGCGCTATCTGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAATGGATGTTGGAAACACGCCCCAGGATCCCCTGGAGCCTGCTTTGGATGACCAAATTCCAATTGCTTCTAAAGAGAGAGCAAAGATTGTTATTTCTGTTCGAGACAGTGACAAGGAGGAGCTCAAACAGTTTCGCCTTTTCATGGATGACAAGTTTGAGCGTCTTTTCAAAATGTACGCAGAGAAACGTAAAATCGATCCCAAGAGTTTGGTTTTCATTTTCGATGGGGATAAAGTCGGCCCAGACGATTCCCCAATTGGCCTTGGCATGGAAGACGATGACATGATAGATGCGATCATTAGGCCGAGTTGA

Protein sequence

MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKDKQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEESAKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKMYAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS

Homology

[Close]

BLAST of Csor.00g165310 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.4e-04
Identity = 27/85 (31.76%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 139 DQIPIASKERAKIVISVRDSDKEELKQFRLFMDDK---FERLFKMYAEKRKIDPKSLVFI 198
           D  PI  ++ A +++ V+  D +E+    LF + K    ++L  +Y ++R +   +  FI
Sbjct: 6   DDKPIDQEQEAHVILKVKSQDGDEV----LFKNKKSAPLKKLMYVYCDRRGLKLDAFAFI 65

Query: 199 FDGDKVGPDDSPIGLGMEDDDMIDA 221
           F+G ++G  ++P  L MED D+IDA
Sbjct: 66  FNGARIGGLETPDELDMEDGDVIDA 86

[Close]

BLAST of Csor.00g165310 vs. NCBI nr
Match: KAG6601268.1 (hypothetical protein SDJN03_06501, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 439 bits (1128), Expect = 4.97e-155
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD
Sbjct: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
           KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225

[Close]

BLAST of Csor.00g165310 vs. NCBI nr
Match: KAG7032057.1 (hypothetical protein SDJN02_06100 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 434 bits (1116), Expect = 3.36e-153
Identity = 222/225 (98.67%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAV SLVDGNRKD
Sbjct: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVASLVDGNRKD 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
           KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLRE+EES
Sbjct: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREMEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMID IIRPS
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDVIIRPS 225

[Close]

BLAST of Csor.00g165310 vs. NCBI nr
Match: XP_022957159.1 (uncharacterized protein LOC111458628 [Cucurbita moschata])

HSP 1 Score: 421 bits (1083), Expect = 3.61e-148
Identity = 217/225 (96.44%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDG RKD
Sbjct: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGIRKD 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
           KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRL+KLELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVALSAKNLLREVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           YAEKRKIDPKSLVFIFDGDKV PDD+P GLGMEDDDMID  IR S
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVSPDDTPTGLGMEDDDMIDVNIRSS 225

[Close]

BLAST of Csor.00g165310 vs. NCBI nr
Match: XP_022985708.1 (uncharacterized protein LOC111483658 [Cucurbita maxima])

HSP 1 Score: 420 bits (1079), Expect = 1.47e-147
Identity = 213/225 (94.67%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MADYAEEFEPLF+YSRV PRSVDCLD+EDSDACMSPEPFSKRSRILNPAVTSLVDGN K+
Sbjct: 1   MADYAEEFEPLFNYSRVHPRSVDCLDEEDSDACMSPEPFSKRSRILNPAVTSLVDGNPKE 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
           KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRL+KLELASV LSAKNLLREVEES
Sbjct: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVTLSAKNLLREVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFR+FMDDKFERLFKM
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRIFMDDKFERLFKM 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           YAEKRKIDPKSLVFIFDGDKVGPDD+P+GLGMEDDDMID  IRPS
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVGPDDTPVGLGMEDDDMIDVNIRPS 225

[Close]

BLAST of Csor.00g165310 vs. NCBI nr
Match: XP_023553495.1 (uncharacterized protein LOC111810893 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417 bits (1073), Expect = 1.21e-146
Identity = 215/225 (95.56%), Postives = 218/225 (96.89%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGN K+
Sbjct: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNPKE 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
           KQVEI DEEEDWLPPPPKV VDAKNMCGEDSTLKELRL KLELA VALSAKNLLREVEES
Sbjct: 61  KQVEIVDEEEDWLPPPPKVLVDAKNMCGEDSTLKELRLKKLELALVALSAKNLLREVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDS+KEELKQFRLFMDDKFERLFKM
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSEKEELKQFRLFMDDKFERLFKM 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           YAEKRKIDPKSLVFIFDGDKVGPDD+PIGLGMEDDDMID  IRPS
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVGPDDTPIGLGMEDDDMIDVNIRPS 225

[Close]

BLAST of Csor.00g165310 vs. ExPASy TrEMBL
Match: A0A6J1H158 (uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC111458628 PE=3 SV=1)

HSP 1 Score: 421 bits (1083), Expect = 1.75e-148
Identity = 217/225 (96.44%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDG RKD
Sbjct: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGIRKD 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
           KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRL+KLELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVALSAKNLLREVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           YAEKRKIDPKSLVFIFDGDKV PDD+P GLGMEDDDMID  IR S
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVSPDDTPTGLGMEDDDMIDVNIRSS 225

[Close]

BLAST of Csor.00g165310 vs. ExPASy TrEMBL
Match: A0A6J1JEF8 (uncharacterized protein LOC111483658 OS=Cucurbita maxima OX=3661 GN=LOC111483658 PE=4 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 7.11e-148
Identity = 213/225 (94.67%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MADYAEEFEPLF+YSRV PRSVDCLD+EDSDACMSPEPFSKRSRILNPAVTSLVDGN K+
Sbjct: 1   MADYAEEFEPLFNYSRVHPRSVDCLDEEDSDACMSPEPFSKRSRILNPAVTSLVDGNPKE 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
           KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRL+KLELASV LSAKNLLREVEES
Sbjct: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVTLSAKNLLREVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFR+FMDDKFERLFKM
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRIFMDDKFERLFKM 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           YAEKRKIDPKSLVFIFDGDKVGPDD+P+GLGMEDDDMID  IRPS
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVGPDDTPVGLGMEDDDMIDVNIRPS 225

[Close]

BLAST of Csor.00g165310 vs. ExPASy TrEMBL
Match: A0A0A0KWH7 (Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 PE=4 SV=1)

HSP 1 Score: 347 bits (891), Expect = 3.15e-119
Identity = 182/225 (80.89%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MAD AEEFEPLFDYSRVQP SV CLDDEDSDA  SP PF+KR++I+NPA TS V+GN K+
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIVNPAATSSVNGNPKE 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
           KQVEIED+EEDWLPPPPKV VDA+N   EDSTLKELRL K ELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDKEEDWLPPPPKVLVDAENRHVEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           AK+DVGNT  DPLEP LD Q P+ASKERAKIVISVRDSDKEELKQ+RLF+DDKFERLFK+
Sbjct: 121 AKVDVGNTSMDPLEPDLDVQTPVASKERAKIVISVRDSDKEELKQYRLFVDDKFERLFKL 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           YA+K KIDPKSLVF+FDGDKVGPDD+P GLGMEDDDMI+  I+ S
Sbjct: 181 YADKLKIDPKSLVFVFDGDKVGPDDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of Csor.00g165310 vs. ExPASy TrEMBL
Match: A0A6J1G027 (uncharacterized protein LOC111449468 OS=Cucurbita moschata OX=3662 GN=LOC111449468 PE=4 SV=1)

HSP 1 Score: 334 bits (856), Expect = 5.84e-114
Identity = 178/225 (79.11%), Postives = 195/225 (86.67%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MAD AEEFEPLFDYSRVQP SV CLDDEDSD   S  PFSKR++I N AVT+ V+     
Sbjct: 1   MADSAEEFEPLFDYSRVQPHSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFVEN---- 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
             VEIED+EEDWLPPPPKVSVDAK+MCGEDSTLK+LRL K ELASVALSAKNLLREVEES
Sbjct: 61  PFVEIEDKEEDWLPPPPKVSVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           A++DV NTPQ  LEPALDDQ PIASKER KIVISVRDSDKEEL+QFRLF+DDKFERLFKM
Sbjct: 121 ARVDVENTPQVSLEPALDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFKM 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           Y+ K KIDPKSLVF+FDGDKVGPDD+P+GLGMEDDDMI+  I+ S
Sbjct: 181 YSNKLKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Csor.00g165310 vs. ExPASy TrEMBL
Match: A0A5A7SVU4 (Putative Ubiquitin-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001350 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 9.54e-114
Identity = 175/225 (77.78%), Postives = 194/225 (86.22%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           MAD AEEFEPLFDYSRVQP SV CLDDEDSDA  SP PF+KR++I N A TS V+GN K+
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
           KQVEIED EEDWLPPPPKV VD  N  GEDSTLKELRL K ELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180
           AK+DVGNT +D LEP LD Q P+ SKERAKIVISVRDSDKEELKQ+RLF+DD FERLFK+
Sbjct: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180

Query: 181 YAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAIIRPS 225
           YA+K KIDP+SLVF+FDGDK+GP+D+P GLGMEDDDMI+  I+ S
Sbjct: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of Csor.00g165310 vs. TAIR 10
Match: AT1G68185.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39
Identity = 98/220 (44.55%), Postives = 137/220 (62.27%), Query Frame = 0


Query: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNRKD 60
           M    E+ EPLFDY RVQP +  C+DD+D DA ++P P   ++   +  V  L D    D
Sbjct: 1   MGGEGEDLEPLFDYRRVQPANFVCIDDDDDDASVTPIPKKAKT---SQTVEKLDD----D 60

Query: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLIKLELASVALSAKNLLREVEES 120
            +V     ++DWL PPPKV  D      EDST+K LR  K+EL S   +  ++++EVEES
Sbjct: 61  VKVIEVTGDDDWLLPPPKVIFDKSKDSVEDSTIKALRSKKMELMSFTKTVGDVMQEVEES 120

Query: 121 AKMDVGNTPQDPLEPALDDQIPI-ASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFK 180
           AK +V  +     E A   Q+P   + +RAKIVI+++D D +  K  R+F D+KFER+ K
Sbjct: 121 AKREVEESRNPSSETAA--QLPSEPTNDRAKIVITIQDKDGQ--KTLRVFADEKFERVIK 180

Query: 181 MYAEKRKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMID 220
           +Y +K K+DP++LVFIFDGDK+ P  +P  LGMED DMI+
Sbjct: 181 LYTDKAKLDPQNLVFIFDGDKIDPSTTPSELGMEDHDMIE 209

[Close]

BLAST of Csor.00g165310 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 45.8 bits (107), Expect = 5.2e-05
Identity = 27/85 (31.76%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 139 DQIPIASKERAKIVISVRDSDKEELKQFRLFMDDK---FERLFKMYAEKRKIDPKSLVFI 198
           D  PI  ++ A +++ V+  D +E+    LF + K    ++L  +Y ++R +   +  FI
Sbjct: 6   DDKPIDQEQEAHVILKVKSQDGDEV----LFKNKKSAPLKKLMYVYCDRRGLKLDAFAFI 65

Query: 199 FDGDKVGPDDSPIGLGMEDDDMIDA 221
           F+G ++G  ++P  L MED D+IDA
Sbjct: 66  FNGARIGGLETPDELDMEDGDVIDA 86

[Close]

BLAST of Csor.00g165310 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 45.8 bits (107), Expect = 5.2e-05
Identity = 30/98 (30.61%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 128 TPQDPLEPALDDQIPIASKERAKIVIS---VRDSDKEELKQFRLFMDDKFERLFKMYAEK 187
           TP++  +P     I +  K +A  V+    V D+D  E+  FR+    + ++L   Y ++
Sbjct: 4   TPEEDKKPDQGAHINLKVKGQAFFVVGTWLVIDTDGNEV-FFRIKRSTQLKKLMNAYCDR 63

Query: 188 RKIDPKSLVFIFDGDKVGPDDSPIGLGMEDDDMIDAII 223
           + +D  S+ F+FDG ++  + +P  L MED D IDA++
Sbjct: 64  QSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAML 100

[Close]

BLAST of Csor.00g165310 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 45.1 bits (105), Expect = 8.9e-05
Identity = 24/74 (32.43%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 149 AKIVISVRDSDKEELKQFRLFMDDKFERLFKMYAEKRKIDPKSLVFIFDGDKVGPDDSPI 208
           A I + V+  D  E+  FR+    + ++L   Y +++ +D  S+ F+FDG ++  + +P 
Sbjct: 16  AHINLKVKGQDGNEV-FFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPD 75

Query: 209 GLGMEDDDMIDAII 223
            L MED D IDA++
Sbjct: 76  ELDMEDGDEIDAML 88

[Close]

BLAST of Csor.00g165310 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04
Identity = 24/74 (32.43%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 149 AKIVISVRDSDKEELKQFRLFMDDKFERLFKMYAEKRKIDPKSLVFIFDGDKVGPDDSPI 208
           A I + V+  D  E+  FR+    + ++L   Y +++ +D  S+ F+FDG ++  + +P 
Sbjct: 15  AHINLKVKGQDGNEV-FFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPD 74

Query: 209 GLGMEDDDMIDAII 223
            L MED D IDA++
Sbjct: 75  ELEMEDGDEIDAML 87

The following BLAST results are available for this feature:

BLAST of Csor.00g165310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLP5	7.4e-04	31.76	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of Csor.00g165310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601268.1	4.97e-155	100.00	hypothetical protein SDJN03_06501, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7032057.1	3.36e-153	98.67	hypothetical protein SDJN02_06100 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022957159.1	3.61e-148	96.44	uncharacterized protein LOC111458628 [Cucurbita moschata]	[more]
XP_022985708.1	1.47e-147	94.67	uncharacterized protein LOC111483658 [Cucurbita maxima]	[more]
XP_023553495.1	1.21e-146	95.56	uncharacterized protein LOC111810893 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g165310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H158	1.75e-148	96.44	uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A6J1JEF8	7.11e-148	94.67	uncharacterized protein LOC111483658 OS=Cucurbita maxima OX=3661 GN=LOC111483658...	[more]
A0A0A0KWH7	3.15e-119	80.89	Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 P...	[more]
A0A6J1G027	5.84e-114	79.11	uncharacterized protein LOC111449468 OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]
A0A5A7SVU4	9.54e-114	77.78	Putative Ubiquitin-like superfamily protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Csor.00g165310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68185.1	1.5e-39	44.55	Ubiquitin-like superfamily protein	[more]
AT5G55170.1	5.2e-05	31.76	small ubiquitin-like modifier 3	[more]
AT5G55160.2	5.2e-05	30.61	small ubiquitin-like modifier 2	[more]
AT4G26840.1	8.9e-05	32.43	small ubiquitin-like modifier 1	[more]
AT5G55160.1	2.0e-04	32.43	small ubiquitin-like modifier 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 126..223 e-value: 3.8E-20 score: 74.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..75
None	No IPR available	PANTHER	PTHR47813	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 1..224
None	No IPR available	CDD	cd01763	Ubl_SUMO_like	coord: 150..221 e-value: 1.74596E-22 score: 84.9393
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 151..222 e-value: 8.8E-12 score: 44.7
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 143..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g165310.m01	Csor.00g165310.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding