Csor.00g165080 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g165080
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Homocysteine S-methyltransferase family protein
Location	Csor_Chr04: 7756039 .. 7757420 (-)
RNA-Seq Expression	Csor.00g165080
Synteny	Csor.00g165080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCCCTGGACATAATTACAATCGGCTCTGGTTGCAGCATCCATTGGAAGCTATGGTGCTTATCTGCTGATGGCTCAGAGTACAGGTGAATTATACATTTAAATATTGAAATAAATATGACTCTGACATTCTGAACTAAACATATCCCCCCCTCTAGTGGGCATTACGGGCCAGATGTGAATGTGGATAAGTTGAAGGATTTTCATCGGCGCAGATTGCAGATTCTTGTTGATGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGGTCTGGTTTATGTCAACTCCTCTTATATCATCTAAGTTGTGGTTTAATGATAGAATCACTCTTGCTGCCACAGTGATACCACTGTAAATTATATTGTTATGTTTTGGTATGAGTTATAATAGAGTATTTGAGAAAACAGCCTATGGTATATTTTATAAACTGTTCATCTCAATTTATGAGTTGTTCATTTCAAGGGATCACGGTAATTTGACTACCATCATGGCATCAATGGGGGATGCATGCATCAGTAGGTCTTAGTTTATTGTGCTTAATTCATGATCAAAATTCTTTTATAATAAAAATTTGAATTAAATCCTTATTCAAACCCCTTAATTTAAGATTTTTCCCATTTTACAAGTTCAGATATTATATTTTAATTCCTAAACCAGAATCCTGATTTAGTTGGTCTTTGTTATGAGATGGAAGAAAAATGTTGAATGTTTTTGATAATTGTCATGAGCATGTCGGACAATCGTTTCAATTGATTTTGCAATTTGTTTGGGTTTCTGTCCTCTTTGTGATCTTGTTTCCAACCAATCTTACCTTGGCTCCCCCAACTCTGGTCTTAAAAAAAAAAAAAAAAAAAAAAAGTAGGCCTGTGTGGAGTTGCTCGAAGAAGAAAACGTCCAAATTCCATCTTGGATCTGCTTTAGCTCCGTAGATGGCGAGAATGCACCGTCGGGAGAGAGCTTCGAGAAGTGCCTTCATGCCATTAATAAAAGTGACAAAGTAACTGCAGTTGGCATAAACTGTACACCTCCTCACTTTATTGAAGCTCTGATTTGTAAGTTCAAAGAGGTAGGAACTAAATCTCTTAGTGTTGATTTAATATTGTTGTGTTGGTCACTTGTTTTGAAACCGAAATGTTCACTTCAGTTAACGAACAAGCACATAGTTGTCTATCCCAATAGTGGCGAGGTATGGGATGGCAGAGCCAAGAAATGGCTGGTGAGTCAACTTAATTCTTCCCTACCCCACTCTGATATTTCATGGCTTGTGGGCCTACATTGTAATATTTCCATTACTAATTAGCGTTCTGGTTTTGGTAGCCATCAAATTGTTTTGGTGATGACAAATTTGAATCGTTTTAG

mRNA sequence

ATGGTATCCCTGGACATAATTACAATCGGCTCTGGTTGCAGCATCCATTGGAAGCTATGGTGCTTATCTGCTGATGGCTCAGAGTACAGTGGGCATTACGGGCCAGATGTGAATGTGGATAAGTTGAAGGATTTTCATCGGCGCAGATTGCAGATTCTTGTTGATGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGGCCTGTGTGGAGTTGCTCGAAGAAGAAAACGTCCAAATTCCATCTTGGATCTGCTTTAGCTCCGTAGATGGCGAGAATGCACCGTCGGGAGAGAGCTTCGAGAAGTGCCTTCATGCCATTAATAAAAGTGACAAAGTAACTGCAGTTGGCATAAACTGTACACCTCCTCACTTTATTGAAGCTCTGATTTGTAAGTTCAAAGAGTTAACGAACAAGCACATAGTTGTCTATCCCAATAGTGGCGAGGTATGGGATGGCAGAGCCAAGAAATGGCTGCCATCAAATTGTTTTGGTGATGACAAATTTGAATCGTTTTAG

Coding sequence (CDS)

ATGGTATCCCTGGACATAATTACAATCGGCTCTGGTTGCAGCATCCATTGGAAGCTATGGTGCTTATCTGCTGATGGCTCAGAGTACAGTGGGCATTACGGGCCAGATGTGAATGTGGATAAGTTGAAGGATTTTCATCGGCGCAGATTGCAGATTCTTGTTGATGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGGCCTGTGTGGAGTTGCTCGAAGAAGAAAACGTCCAAATTCCATCTTGGATCTGCTTTAGCTCCGTAGATGGCGAGAATGCACCGTCGGGAGAGAGCTTCGAGAAGTGCCTTCATGCCATTAATAAAAGTGACAAAGTAACTGCAGTTGGCATAAACTGTACACCTCCTCACTTTATTGAAGCTCTGATTTGTAAGTTCAAAGAGTTAACGAACAAGCACATAGTTGTCTATCCCAATAGTGGCGAGGTATGGGATGGCAGAGCCAAGAAATGGCTGCCATCAAATTGTTTTGGTGATGACAAATTTGAATCGTTTTAG

Protein sequence

MVSLDIITIGSGCSIHWKLWCLSADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELTNKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF

Homology

[Close]

BLAST of Csor.00g165080 vs. ExPASy Swiss-Prot
Match: Q9SDL7 (Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HMT-1 PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-71
Identity = 123/155 (79.35%), Postives = 138/155 (89.03%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYG +V++DKLKDFHRRRLQ+LV+A PDLLAFETIPNKLEAQACVELLEEE 
Sbjct: 139 ADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEK 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIP+WICF+SVDGE APSGESFE+CL  +NKS+ + AVGINC PP FIE LI KF +LT
Sbjct: 199 VQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGINCAPPQFIENLIRKFAKLT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 179
            K IVVYPNSGEVWDG+AK+WLPS CFGDD+FE F
Sbjct: 259 KKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMF 293

[Close]

BLAST of Csor.00g165080 vs. ExPASy Swiss-Prot
Match: A4ZGQ8 (Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-71
Identity = 122/155 (78.71%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSG YG DV++DKLKDFHRRR+Q+LV+ASPDLLAFETIPNKLEAQACVELLEEEN
Sbjct: 139 ADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLEAQACVELLEEEN 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIP+WICF+SVDGENAPSGESF++CL  +NKS+ + AVGINC PP F++ LI KF +LT
Sbjct: 199 VQIPAWICFTSVDGENAPSGESFQECLETLNKSNNICAVGINCAPPQFMDNLIRKFSKLT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 179
            K IVVYPNSGEVWDG+AKKWLPS CFGD +FE F
Sbjct: 259 QKAIVVYPNSGEVWDGKAKKWLPSQCFGDAEFEMF 293

[Close]

BLAST of Csor.00g165080 vs. ExPASy Swiss-Prot
Match: Q9FUN0 (Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 6.1e-62
Identity = 106/154 (68.83%), Postives = 123/154 (79.87%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSG YG D+  +KLKDFHRRRLQ+L  A PDL+AFE IPN++EAQA VELLEEE 
Sbjct: 133 ADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQALVELLEEEK 192

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIPSWICFSSVDG+N  SGESF  CL  +N S+KV  VG+NCTPP FIE +IC+F++ T
Sbjct: 193 VQIPSWICFSSVDGKNLCSGESFADCLKILNASEKVAVVGVNCTPPQFIEGIICEFRKQT 252

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFES 178
            K I VYPNSGEVWDGRAK+WLP  C G   F++
Sbjct: 253 KKAIAVYPNSGEVWDGRAKRWLPVECLGHKSFDA 286

[Close]

BLAST of Csor.00g165080 vs. ExPASy Swiss-Prot
Match: Q9M1W4 (Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-47
Identity = 85/155 (54.84%), Postives = 115/155 (74.19%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSG YG  + ++KLKDFHRRRLQ+L ++  DL+AFETIPNK+EAQA  +LLEE +
Sbjct: 143 ADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGD 202

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           V+IP W  F+S DG N  SG+S ++C+      +KV AVGINCTPP FIE L+ + +++T
Sbjct: 203 VKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCTPPRFIEGLVLEIEKVT 262

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 179
           +K I+VYPNSGE +D   K+W+ +   GD+ F S+
Sbjct: 263 SKPILVYPNSGESYDADRKEWVENTGVGDEDFVSY 297

[Close]

BLAST of Csor.00g165080 vs. ExPASy Swiss-Prot
Match: Q9FUM8 (Homocysteine S-methyltransferase 3 OS=Zea mays OX=4577 GN=HMT-3 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.3e-47
Identity = 90/155 (58.06%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSG YG     + LKDFHRRRLQ+L +A PDL+AFETIPNKLEAQA VELLEE N
Sbjct: 142 ADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLEECN 201

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           + IPSW+ F+S DG +  SG+S  +C    +K  KV AVGINCTPP FI  LI   +++T
Sbjct: 202 INIPSWLSFNSKDGVHVVSGDSLIECATIADKCAKVGAVGINCTPPRFIHGLILSIRKVT 261

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 179
           +K I++YPNSGE +DG  K+W+ S    D  F S+
Sbjct: 262 DKPILIYPNSGERYDGEKKEWVESTGVSDGDFVSY 296

[Close]

BLAST of Csor.00g165080 vs. NCBI nr
Match: KAG6601290.1 (Homocysteine S-methyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 381 bits (979), Expect = 7.11e-134
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MVSLDIITIGSGCSIHWKLWCLSADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDL 60
           MVSLDIITIGSGCSIHWKLWCLSADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDL
Sbjct: 1   MVSLDIITIGSGCSIHWKLWCLSADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDL 60

Query: 61  LAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVT 120
           LAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVT
Sbjct: 61  LAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVT 120

Query: 121 AVGINCTPPHFIEALICKFKELTNKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 178
           AVGINCTPPHFIEALICKFKELTNKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF
Sbjct: 121 AVGINCTPPHFIEALICKFKELTNKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 178

[Close]

BLAST of Csor.00g165080 vs. NCBI nr
Match: KAG7032078.1 (Homocysteine S-methyltransferase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350 bits (897), Expect = 6.58e-121
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MVSLDIITIGSGCSIHWKLWCLSADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDL 60
           MVSLDIITIGSGCSIHWK WCLSADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDL
Sbjct: 1   MVSLDIITIGSGCSIHWKPWCLSADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDL 60

Query: 61  LAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVT 120
           LAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVT
Sbjct: 61  LAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVT 120

Query: 121 AVGINCTPPHFIEALICKFKELTNKHIVVYPNSGEVWDGRAKKWLPS 167
           AVGINCTPPHFIEALICKFKELTNKHIVVYPNSGEVWDGRAKKWL S
Sbjct: 121 AVGINCTPPHFIEALICKFKELTNKHIVVYPNSGEVWDGRAKKWLVS 167

[Close]

BLAST of Csor.00g165080 vs. NCBI nr
Match: XP_038893227.1 (homocysteine S-methyltransferase 1 [Benincasa hispida])

HSP 1 Score: 323 bits (828), Expect = 1.30e-108
Identity = 150/155 (96.77%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN
Sbjct: 139 ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           +QIPSWICFSS+DGENAPSGESFEKCLHAINKSDKV AVGINCTPPHFIEALI KFKELT
Sbjct: 199 IQIPSWICFSSIDGENAPSGESFEKCLHAINKSDKVNAVGINCTPPHFIEALITKFKELT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 178
           NKHIVVYPNSGEVWDGR+KKWLPSNCFGDDKFESF
Sbjct: 259 NKHIVVYPNSGEVWDGRSKKWLPSNCFGDDKFESF 293

[Close]

BLAST of Csor.00g165080 vs. NCBI nr
Match: XP_008446599.1 (PREDICTED: homocysteine S-methyltransferase 1 [Cucumis melo])

HSP 1 Score: 319 bits (817), Expect = 6.12e-107
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYGPDVNVDKLKDFHRRRL+ILVDASPDLLAFETIPNKLEAQACVELLEEEN
Sbjct: 139 ADGSEYSGHYGPDVNVDKLKDFHRRRLRILVDASPDLLAFETIPNKLEAQACVELLEEEN 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIPSWICFSSVDGENAPSGESFEKCL+AINKSDKV AVGINCTPPHFIEALI KFKELT
Sbjct: 199 VQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGINCTPPHFIEALITKFKELT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 178
           NKHIVVYPNSGEVWDGR KKWLPSNCFGDDKFESF
Sbjct: 259 NKHIVVYPNSGEVWDGRFKKWLPSNCFGDDKFESF 293

[Close]

BLAST of Csor.00g165080 vs. NCBI nr
Match: XP_004135092.1 (homocysteine S-methyltransferase 1 isoform X1 [Cucumis sativus] >KGN52080.1 hypothetical protein Csa_008676 [Cucumis sativus])

HSP 1 Score: 316 bits (810), Expect = 7.08e-106
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYGPDVNVDKLKDFHRRRLQI VDASPDLLAFETIPNKLEAQACVELLEEEN
Sbjct: 139 ADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASPDLLAFETIPNKLEAQACVELLEEEN 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           +QIPSWICFSSVDGENAPSGESFEKCL+AINKSDKV AVGINCTPPHFIEALI KFKELT
Sbjct: 199 IQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGINCTPPHFIEALITKFKELT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFES 177
           NKHIVVYPNSGEVWDGR KKWLPSNCFGDDKFES
Sbjct: 259 NKHIVVYPNSGEVWDGRFKKWLPSNCFGDDKFES 292

[Close]

BLAST of Csor.00g165080 vs. ExPASy TrEMBL
Match: A0A1S3BEY1 (homocysteine S-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103489284 PE=4 SV=1)

HSP 1 Score: 319 bits (817), Expect = 2.96e-107
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYGPDVNVDKLKDFHRRRL+ILVDASPDLLAFETIPNKLEAQACVELLEEEN
Sbjct: 139 ADGSEYSGHYGPDVNVDKLKDFHRRRLRILVDASPDLLAFETIPNKLEAQACVELLEEEN 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIPSWICFSSVDGENAPSGESFEKCL+AINKSDKV AVGINCTPPHFIEALI KFKELT
Sbjct: 199 VQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGINCTPPHFIEALITKFKELT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 178
           NKHIVVYPNSGEVWDGR KKWLPSNCFGDDKFESF
Sbjct: 259 NKHIVVYPNSGEVWDGRFKKWLPSNCFGDDKFESF 293

[Close]

BLAST of Csor.00g165080 vs. ExPASy TrEMBL
Match: A0A0A0KR42 (Hcy-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609660 PE=4 SV=1)

HSP 1 Score: 316 bits (810), Expect = 3.43e-106
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYGPDVNVDKLKDFHRRRLQI VDASPDLLAFETIPNKLEAQACVELLEEEN
Sbjct: 139 ADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASPDLLAFETIPNKLEAQACVELLEEEN 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           +QIPSWICFSSVDGENAPSGESFEKCL+AINKSDKV AVGINCTPPHFIEALI KFKELT
Sbjct: 199 IQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGINCTPPHFIEALITKFKELT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFES 177
           NKHIVVYPNSGEVWDGR KKWLPSNCFGDDKFES
Sbjct: 259 NKHIVVYPNSGEVWDGRFKKWLPSNCFGDDKFES 292

[Close]

BLAST of Csor.00g165080 vs. ExPASy TrEMBL
Match: A0A6J1D951 (homocysteine S-methyltransferase 1 OS=Momordica charantia OX=3673 GN=LOC111018744 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 5.31e-103
Identity = 144/155 (92.90%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSG+YGPDVNVDKLKDFHRRRLQ+LV+A PDLLAFETIPNKLEAQACVELLEEEN
Sbjct: 139 ADGSEYSGNYGPDVNVDKLKDFHRRRLQVLVNACPDLLAFETIPNKLEAQACVELLEEEN 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIPSWICFSSVDG+NAPSGESFE+CL AINKS+KV AVGINCTPPHFIEALICKFKELT
Sbjct: 199 VQIPSWICFSSVDGKNAPSGESFEECLRAINKSNKVNAVGINCTPPHFIEALICKFKELT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 178
           +K IVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF
Sbjct: 259 DKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 293

[Close]

BLAST of Csor.00g165080 vs. ExPASy TrEMBL
Match: A0A6J1HZT4 (homocysteine S-methyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467714 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 6.14e-102
Identity = 145/154 (94.16%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYGPDV+VD LKDFHRRRLQILV ASPDLLAFETIPNKLEAQACVELLEEEN
Sbjct: 139 ADGSEYSGHYGPDVDVDTLKDFHRRRLQILVGASPDLLAFETIPNKLEAQACVELLEEEN 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQI SWICFSSVDGENAPSGESFE+CL AINKSDKV AVGINCTPPHFIEALICKFKELT
Sbjct: 199 VQILSWICFSSVDGENAPSGESFEECLQAINKSDKVNAVGINCTPPHFIEALICKFKELT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFES 177
           +K IVVYPNSGEVWDGRAKKWLPSNCFGDDKFES
Sbjct: 259 DKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFES 292

[Close]

BLAST of Csor.00g165080 vs. ExPASy TrEMBL
Match: A0A6J1G1A5 (homocysteine S-methyltransferase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449762 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 6.14e-102
Identity = 145/154 (94.16%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYGPDV+VD LK FHRRRLQILV ASPDLLAFETIPNKLEAQACVELLEEEN
Sbjct: 139 ADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFETIPNKLEAQACVELLEEEN 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIPSWICFSSVDGENAPSGESFE+CL AINKSDKV AVGINCTPPHFIEALICKFKELT
Sbjct: 199 VQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGINCTPPHFIEALICKFKELT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFES 177
           +K IVVYPNSGEVWDGRAKKWLPSNCFGDDKFES
Sbjct: 259 DKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFES 292

[Close]

BLAST of Csor.00g165080 vs. TAIR 10
Match: AT3G25900.1 (Homocysteine S-methyltransferase family protein )

HSP 1 Score: 270.0 bits (689), Expect = 1.3e-72
Identity = 123/155 (79.35%), Postives = 138/155 (89.03%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYG +V++DKLKDFHRRRLQ+LV+A PDLLAFETIPNKLEAQACVELLEEE 
Sbjct: 139 ADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEK 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIP+WICF+SVDGE APSGESFE+CL  +NKS+ + AVGINC PP FIE LI KF +LT
Sbjct: 199 VQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGINCAPPQFIENLIRKFAKLT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 179
            K IVVYPNSGEVWDG+AK+WLPS CFGDD+FE F
Sbjct: 259 KKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMF 293

[Close]

BLAST of Csor.00g165080 vs. TAIR 10
Match: AT3G25900.3 (Homocysteine S-methyltransferase family protein )

HSP 1 Score: 229.6 bits (584), Expect = 2.0e-60
Identity = 109/155 (70.32%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYG +V++DKLKDFHRRRLQ+LV+A PDLLAFETIPNKLEAQACVELLEEE 
Sbjct: 139 ADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEK 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIP+WICF+SVDGE APSGESFE+CL  +NKS+ + A                    LT
Sbjct: 199 VQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYA--------------------LT 258

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 179
            K IVVYPNSGEVWDG+AK+WLPS CFGDD+FE F
Sbjct: 259 KKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMF 273

[Close]

BLAST of Csor.00g165080 vs. TAIR 10
Match: AT3G25900.2 (Homocysteine S-methyltransferase family protein )

HSP 1 Score: 203.4 bits (516), Expect = 1.6e-52
Identity = 94/122 (77.05%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSGHYG +V++DKLKDFHRRRLQ+LV+A PDLLAFETIPNKLEAQACVELLEEE 
Sbjct: 139 ADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEK 198

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           VQIP+WICF+SVDGE APSGESFE+CL  +NKS+ + AVGINC PP FIE LI KF + T
Sbjct: 199 VQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGINCAPPQFIENLIRKFAKAT 258

Query: 144 NK 146
           ++
Sbjct: 259 DE 260

[Close]

BLAST of Csor.00g165080 vs. TAIR 10
Match: AT3G63250.2 (homocysteine methyltransferase 2 )

HSP 1 Score: 191.0 bits (484), Expect = 8.0e-49
Identity = 85/155 (54.84%), Postives = 115/155 (74.19%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSG YG  + ++KLKDFHRRRLQ+L ++  DL+AFETIPNK+EAQA  +LLEE +
Sbjct: 103 ADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGD 162

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           V+IP W  F+S DG N  SG+S ++C+      +KV AVGINCTPP FIE L+ + +++T
Sbjct: 163 VKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCTPPRFIEGLVLEIEKVT 222

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 179
           +K I+VYPNSGE +D   K+W+ +   GD+ F S+
Sbjct: 223 SKPILVYPNSGESYDADRKEWVENTGVGDEDFVSY 257

[Close]

BLAST of Csor.00g165080 vs. TAIR 10
Match: AT3G63250.1 (homocysteine methyltransferase 2 )

HSP 1 Score: 191.0 bits (484), Expect = 8.0e-49
Identity = 85/155 (54.84%), Postives = 115/155 (74.19%), Query Frame = 0


Query: 24  ADGSEYSGHYGPDVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQACVELLEEEN 83
           ADGSEYSG YG  + ++KLKDFHRRRLQ+L ++  DL+AFETIPNK+EAQA  +LLEE +
Sbjct: 143 ADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGD 202

Query: 84  VQIPSWICFSSVDGENAPSGESFEKCLHAINKSDKVTAVGINCTPPHFIEALICKFKELT 143
           V+IP W  F+S DG N  SG+S ++C+      +KV AVGINCTPP FIE L+ + +++T
Sbjct: 203 VKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCTPPRFIEGLVLEIEKVT 262

Query: 144 NKHIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESF 179
           +K I+VYPNSGE +D   K+W+ +   GD+ F S+
Sbjct: 263 SKPILVYPNSGESYDADRKEWVENTGVGDEDFVSY 297

The following BLAST results are available for this feature:

BLAST of Csor.00g165080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SDL7	1.9e-71	79.35	Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HMT-1 PE=1...	[more]
A4ZGQ8	1.9e-71	78.71	Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN...	[more]
Q9FUN0	6.1e-62	68.83	Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1	[more]
Q9M1W4	1.1e-47	54.84	Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1...	[more]
Q9FUM8	7.3e-47	58.06	Homocysteine S-methyltransferase 3 OS=Zea mays OX=4577 GN=HMT-3 PE=2 SV=1	[more]

BLAST of Csor.00g165080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601290.1	7.11e-134	100.00	Homocysteine S-methyltransferase 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
KAG7032078.1	6.58e-121	98.80	Homocysteine S-methyltransferase 1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_038893227.1	1.30e-108	96.77	homocysteine S-methyltransferase 1 [Benincasa hispida]	[more]
XP_008446599.1	6.12e-107	96.77	PREDICTED: homocysteine S-methyltransferase 1 [Cucumis melo]	[more]
XP_004135092.1	7.08e-106	96.10	homocysteine S-methyltransferase 1 isoform X1 [Cucumis sativus] >KGN52080.1 hypo...	[more]

BLAST of Csor.00g165080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BEY1	2.96e-107	96.77	homocysteine S-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103489284 PE=4 ...	[more]
A0A0A0KR42	3.43e-106	96.10	Hcy-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609660...	[more]
A0A6J1D951	5.31e-103	92.90	homocysteine S-methyltransferase 1 OS=Momordica charantia OX=3673 GN=LOC11101874...	[more]
A0A6J1HZT4	6.14e-102	94.16	homocysteine S-methyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A6J1G1A5	6.14e-102	94.16	homocysteine S-methyltransferase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449762...	[more]

BLAST of Csor.00g165080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25900.1	1.3e-72	79.35	Homocysteine S-methyltransferase family protein	[more]
AT3G25900.3	2.0e-60	70.32	Homocysteine S-methyltransferase family protein	[more]
AT3G25900.2	1.6e-52	77.05	Homocysteine S-methyltransferase family protein	[more]
AT3G63250.2	8.0e-49	54.84	homocysteine methyltransferase 2	[more]
AT3G63250.1	8.0e-49	54.84	homocysteine methyltransferase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003726	Homocysteine-binding domain	PFAM	PF02574	S-methyl_trans	coord: 31..165 e-value: 1.7E-32 score: 113.4
IPR003726	Homocysteine-binding domain	PROSITE	PS50970	HCY	coord: 1..178 score: 16.70355
IPR036589	Homocysteine-binding domain superfamily	GENE3D	3.20.20.330		coord: 18..178 e-value: 4.8E-42 score: 146.4
IPR036589	Homocysteine-binding domain superfamily	SUPERFAMILY	82282	Homocysteine S-methyltransferase	coord: 29..166
None	No IPR available	PANTHER	PTHR46015	ZGC:172121	coord: 23..178
None	No IPR available	PANTHER	PTHR46015:SF7	HOMOCYSTEINE S-METHYLTRANSFERASE 1	coord: 23..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g165080.m01	Csor.00g165080.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0032259	methylation
biological_process	GO:0033528	S-methylmethionine cycle
molecular_function	GO:0047150	betaine-homocysteine S-methyltransferase activity
molecular_function	GO:0008898	S-adenosylmethionine-homocysteine S-methyltransferase activity
molecular_function	GO:0008270	zinc ion binding